Identifiers and Description
Gene Model Identifier
TTHERM_00569420Standard Name
TRF5 (Topoisomerase one-Related Function)Aliases
PreTt10470 | 76.m00172 | 3810.m02033Description
TRF5 chitinase class I family protein; Related to Saccharomyces cerevisiae noncanonical poly(A) polymerase proteins TRF5 and PAP2 (TRF4)Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
External Links
Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
No Data fetched for Domains
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al., 2023)
GeneMania
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_03466.1 9.997093137033517e-262 Description: chitinase class I family protein (459 aa) Oxytricha Contig1080.1.g59 2.000364041471746e-45 Description: Cid1 family poly A polymerase SGD YOL115W 2.0008113830639685e-30 Description: PAP2 Non-canonical poly(A) polymerase, involved in nuclear RNA degradation as a component of the TRAMP complex; catalyzes polyadenylation of hypomodified tRNAs, and snoRNA and rRNA precursors; overlapping but non-redundant functions with Trf5p DictyBase DDB_G0295737 1.9993007828132465e-27 Description: DDB_G0295737 on chromosome: 5 position 3359151 to 3362061 WormBase WBGene00014115 4.9988726541653934e-26 Description: locus:gld-4 Poly(A) RNA polymerase gld-4 status:Confirmed UniProt:G5EFL0 protein_id:CAB02138.3 Stentor Coeruleus SteCoe_30056 7.095474162284704e-23 Description: None
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00569420(coding)
ATGTCAGATAAAATGGATAAAATTTTGAAAGACTTAGATCTCACAAGTGGGTCTTAAAAG
AGAAAAATGAAAGATAGAGATTTAGAATAAGAATAAGGCGATTTAAGTAAAGAAATAATG
TAAAGCGCAGATAATTCATTCAAGATTGAGGATTAAACTTAAAAAAAAATAAAGATATCA
GATGATATTTAGGGAGATTATAATAATAATTAAGATGTAAATTAACAAGATGGTGTTTTA
GCAGAGAAAATAGGCGAATAGATAGTTTTTATAAACCTTGAAGAAAATAAATAGCAATAC
TAAAATAAACCTGTAGAAATAGATGACTTTTTATAGTTTGAGGAAAAATTAGATAAAAAG
GAAGCCGAAGAAGGTGATTTAAATATAGAACCAATTATTGGAAAGCAAGCAGATGAATAA
AAGGTAGCACCCTGGGCTTCTCTTAGAACTCTGCGTATTAAAAATCCTCTTTTGAGATTA
CATAATGAAATTATTGAGCTTACTGATTATTTATCACCTACCAAACAAGAGCATGAAATA
AGATTAAAGTCAATGGAAAGGCTCAAAAAAATTTTGTTAGATGCAGTTCCTGGATGTGAA
GTTAAAACCTTTGGTTCTTTCAGCACTGAATTATATCTACCTAACTCAGATATAGATATG
GTTATTGTGAAAGATGATATACAGAACAAATCTCTGTATAAAAAAGTAGCTGATAAAATA
ATGAATTGTGATGATATTTATGAAAATATAAATTTAGTTACTAATGCTAAGGTGCCTATT
ATCAAATTTGTTGAGAAGGAAACTTAAATCAATTTTGATATTTCTTTTAACAAAGAAGAT
GGTGTTAAATAATTATCAGAAGTTAAAAAAGGCTTAGAACTCTATCCTGAAATGAAATAC
CTGATTATGGTAATGAAATGCATTCTCAGATAAAGAGACTTGCATGAAACATATTCAGGT
GGTATTGGAAGTTTTCTGCTTTTCTGTATGATTCTTGCATTTTTAAGGGATCTTCGCAGA
CAATATGAAAAGGAAAATAGAGTTTAAGAAATACAAAATATTACCTTAGGAGAATATTTA
TTAAAAATGTTTAAATTTTATGGATTTTTTGATGTTGACAATAAAAGAATTATCATGCAT
GAAGGAGGTGAAGCACAATTCAAAATTTACATGATTGTTAATTAATTTTTACTTAAAATA
TATATTTAGGTGCAATTGTCGAAAAGGATATTAAAGATAAAAGATTTAGCTTACTTAGCC
CCTAGGATCCTACTCACGATATTGGAAATTCATCTTTCAAAATCAAAGAATAAGTTTTCC
CACTATTCAAAAATAGATTCTAATTCTTTACTAATTATAACTTCAAATAAGGCGAAAGCA
CTCTTAAATATTTAGTCAATCCATCTAACTCAACATTTACTTTCTAAAAGGAAGAAAAGT
GAAAATAAAAAATTTATCTATCCTCTAAACAATAAAGCCTTTTGA>TTHERM_00569420(gene)
ATGTCAGATAAAATGGATAAAATTTTGAAAGACTTAGATCTCACAAGTGGTAAAATAATT
TATAGATTAATATTATTTTAGCTGATATGATAAATATAATTATTAAGGGTCTTAAAAGAG
AAAAATGAAAGATAGAGATTTAGAATAAGAATAAGGCGATTTAAGTAAAGAAATAATGTA
AAGCGCAGATAATTCATTCAAGATTGAGGATTAAACTTAAAAAAAAATAAAGATATCAGA
TGATATTTAGGGAGATTATAATAATAATTAAGATGTAAATTAACAAGATGGTGTTTTAGC
AGAGAAAATAGGCGAATAGATAGTTTTTATAAACCTTGAAGAAAATAAATAGCAATACTA
AAATAAACCTGTAGAAATAGATGACTTTTTATAGTTTGAGGAAAAATTAGATAAAAAGGA
AGCCGAAGAAGGTGATTTAAATATAGAACCAATTATTGGAAAGCAAGCAGATGAATAAAA
GGTAGCACCCTGGGCTTCTCTTAGAACTCTGCGTATTAAAAATCCTCTTTTGAGATTACA
TAATGAAATTATTGAGCTTACTGATTATTTATCACCTACCAAACAAGAGCATGAAATAAG
ATTAAAGTCAATGGAAAGGTAAAAAGTGACTGTATATTTGTATTATTTTGTTAGTTGGAA
AATAAATCCTTTTTTTAGCCTACTATCAATTCTTATTACTTAATAGTATAAAATCTTAAA
ATTTTAAACTGTGTATGATATTAATTAAAAATAATTTGCTTAAAGTAGAAGAAAGTAAAT
AAATAAACAAAAAAACAAAAATCATATGTGCTTATTAAATAATCAATCTAATCCAATTTA
ATTAAAAAATTTTATCCTATTTTAAATATAGGCTCAAAAAAATTTTGTTAGATGCAGTTC
CTGGATGTGAAGTTAAAACCTTTGGTTCTTTCAGCACTGAATTATATCTACCTAACTCAG
ATATAGATATGGTAAATTTTAAAATATATTTTAAGTTTAAAATAATTCACCTCCAATTAA
TTATATTGAATTAATTTGTCGTCTAGAAAATATTTAGTGATTACAAATAATATGAACATT
AATTAAAATTTAAAAATAATTTGAATGTGATTGTAATTGATTTATAACTAATGAAATTAT
TTTTTATAATAATATGAAAGGTTATTGTGAAAGATGATATACAGAACAAATCTCTGTATA
AAAAAGTAGCTGATAAAATAATGAATTGTGATGATATTTATGAAAATATAAATTTAGTTA
CTAATGCTAAGGTGCCTATTATCAAATTTGTTGAGAAGGAAACTTAAATCAATTTTGATA
TTTCTTTTAACAAAGAAGATGGTGTTAAATAATTATCAGAAGTTAAAAAAGGCTTAGAAC
TCTATCCTGAAATGAAATACCTGATTATGGTAATGAAATGCATTCTCAGATAAAGAGACT
TGCATGAAACATATTCAGGTGGTATTGGAAGTTTTCTGCTTTTCTGTATGATTCTTGCAT
TTTTAAGGGATCTTCGCAGACAATATGAAAAGGAAAATAGAGTTTAAGAAATACAAAATA
TTACCTTAGGAGAATATTTATTAAAAATGTTTAAATTTTATGGATTTTTTGATGTTGACA
ATAAAAGAATTATCATGCATGAAGGAGGTGAAGCACAATTCAAAATTTACATGATTGTTA
ATTAATTTTTACTTAAAATATATATTTAGGTGCAATTGTCGAAAAGGATATTAAAGATAA
AAGATTTAGCTTACTTAGCCCCTAGGATCCTACTCACGATATTGGAAATTCATCTTTCAA
AATCAAAGAATAAGTTTTCCCACTATTCAAAAATAGATTCTAATTCTTTACTAATTATAA
CTTCAAATAAGGCGAAAGCACTCTTAAATATTTAGTCAATCCATCTAACTCAACATTTAC
TTTCTAAAAGGAAGAAAAGTGAAAATAAAAAATTTATCTATCCTCTAAACAATAAAGCCT
TTTGA>TTHERM_00569420(protein)
MSDKMDKILKDLDLTSGSQKRKMKDRDLEQEQGDLSKEIMQSADNSFKIEDQTQKKIKIS
DDIQGDYNNNQDVNQQDGVLAEKIGEQIVFINLEENKQQYQNKPVEIDDFLQFEEKLDKK
EAEEGDLNIEPIIGKQADEQKVAPWASLRTLRIKNPLLRLHNEIIELTDYLSPTKQEHEI
RLKSMERLKKILLDAVPGCEVKTFGSFSTELYLPNSDIDMVIVKDDIQNKSLYKKVADKI
MNCDDIYENINLVTNAKVPIIKFVEKETQINFDISFNKEDGVKQLSEVKKGLELYPEMKY
LIMVMKCILRQRDLHETYSGGIGSFLLFCMILAFLRDLRRQYEKENRVQEIQNITLGEYL
LKMFKFYGFFDVDNKRIIMHEGGEAQFKIYMIVNQFLLKIYIQVQLSKRILKIKDLAYLA
PRILLTILEIHLSKSKNKFSHYSKIDSNSLLIITSNKAKALLNIQSIHLTQHLLSKRKKS
ENKKFIYPLNNKAF