Identifiers and Description
Gene Model Identifier
TTHERM_00585180Standard Name
HPL4 (Heterochromatin Protein 1 Like 4)Aliases
PreTt04124 | 80.m00170 | 3675.m00068 | HPCDescription
HPL4 heterochromatin protein; Heterochromatin proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
External Links
Gene Ontology Annotations
Cellular Component
- chromatin (IEA) | GO:0000785
- nucleus (IEA) | GO:0005634
Molecular Function
- chromatin binding (IEA) | GO:0003682
Biological Process
- chromatin assembly or disassembly (IEA) | GO:0006333
Domains
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al., 2023)
GeneMania
Tetrahymena Stock Center
- ( SD02497 ) Macronucleus: Two HA tags after ATG of TCD3, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
- ( SD02498 ) Macronucleus: Two HA tags after ATG of TCD3, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
- ( SD02499 ) Macronucleus: Two HA tags after ATG of TCD4, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
- ( SD02500 ) Macronucleus: Two HA tags after ATG of TCD4, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
- ( SD02532 ) Macronucleus: Used one neo4 construct to KO both adjacent TCD3 and TCD4
- ( SD02533 ) Macronucleus: Used one neo4 construct to KO both adjacent TCD3 and TCD4
Homologs
Source Identifier Score Tetrahymena borealis EI9_15193.1 4.997860539111522e-53 Description: hypothetical protein (347 aa) WormBase WBGene00001996 0.000005998506718272351 Description: locus:hpl-2 status:Confirmed UniProt:G5EDE2 protein_id:CAB07241.1
General Information
No Data fetched for General Information
Associated Literature
- Ref:28692189: Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):
Sequences
>TTHERM_00585180(coding)
ATGGAACAATAATAAACAAATTTAGAATACTCTCCTTATATTTTTGAGATTGAGAGCATT
TTGGAAAAGAGAATTCATCCTAAAACAGGAAAAACAGAATTTTTAGTTTAATGGAAATAA
TGGCCAGATGATCCAACATGGGAGCCAGCTTAAAATATCTAAAGCTTTTTAAATAACAAT
AATTAAAAGAAAAAGGAAGATGATTCACATTCTAACTTGAAGCAAAGAAAATTGTAAAAA
ATTGAAGACAAAGTGAAGAGGTCTGAACAAGCAAATAATCAAACTTAGAAGCTAAATGAT
AGCTTGCAATATTTAGATGAATAAATTTAATTTCTTTAAAATAAATACGAGCTTTTTATT
TCAGATTCAGAGACAGAGTAAAAAAAATTAATTCCTGATAAAATAAGCGAAATTGAACCA
GAGTAAATTGAAAATGAAGAAAATACCAATATGATGAATAACGTTTAAATTGAGCCAATC
TATAAAATATTAGACAAATAAGAAGTTGAAAATACTATTTATTATCTTATTCTCTTTTAT
GATGAAAAATTACCTTAATGGGTGAAGTAAGAAAAGCTGATTGGCTATGAAGATGAAATT
TTAGAATATGAAAAACAAATAATTTAAGAGAGCACTGAACTAAACTCTAAATAGTTATTA
GAAACCAGTATATAAAGTATACAAAATGAAAATTTATAAATAGAAAAAGATCAAAAATAA
GAAGAAAATTAATTTAAAAAGGTAATGGATCAAGAAAATCTTGAAAAAAGTAAAAATAAT
TTTAATAGGAATCAACAATTTTAAAATGATATAGATGAAGGTGATTTTTTAACAGATTAA
ATATAAGATATAGAAGCAAACTTTATGTTTACTTATAGTATTAATTGGAAACCGAGAAAA
GATGGAAACATTCCTCTAAATAAATAAGTCTAATTTGTAAAAAAAATTACAATAACGCCA
TAAGAATTCATTGATTAAATCCTATAAAATAAATTTCTTAATTGA>TTHERM_00585180(gene)
ATGGAACAATAATAAACAAATTTAGAATACTCTCCTTATATTTTTGAGATTGAGAGCATT
TTGGAAAAGAGAATTCATCCTAAAACAGGAAAAACAGAATTTTTAGTTTAATGGAAATGT
ATATTTTATATTAAAAATTCAAGTATTTATTATTTAAAATAAATTTAATTTAGAATGGCC
AGATGATCCAACATGGGAGCCAGCTTAAAATATCTAAAGCTTTTTAAATAACAATAATTA
AAAGAAAAAGGAAGATGATTCACATTCTAACTTGAAGCAAAGAAAATTGTAAAAAATTGA
AGACAAAGTGAAGAGGTCTGAACAAGCAAATAATCAAACTTAGAAGCTAAATGATAGCTT
GCAATATTTAGATGAATAAATTTAATTTCTTTAAAATAAATACGAGCTTTTTATTTCAGA
TTCAGAGACAGAGTAAAAAAAATTAATTCCTGATAAAATAAGCGAAATTGAACCAGAGTA
AATTGAAAATGAAGAAAATACCAATATGATGAATAACGTTTAAATTGAGCCAATCTATAA
AATATTAGACAAATAAGAAGTTGAAAATACTATTTATTATCTTATTCTCTTTTATGGTAA
TATTTATTTTTGAATTATTTATTGAATTTATTGTTTAATAATTTTAGATGAAAAATTACC
TTAATGGGTGAAGTAAGAAAAGCTGATTGGCTATGAAGATGAAATTTTAGAATATGAAAA
ACAAATAATTTAAGAGAGCACTGAACTAAACTCTAAATAGTTATTAGAAACCAGTATATA
AAGTATACAAAATGAAAATTTATAAATAGAAAAAGATCAAAAATAAGAAGAAAATTAATT
TAAAAAGGTAATGGATCAAGAAAATCTTGAAAAAAGTAAAAATAATTTTAATAGGAATCA
ACAATTTTAAAATGATATAGATGAAGGTGATTTTTTAACAGATTAAATATAAGATATAGA
AGCAAACTTTATGTTTACTTATAGTATTAATTGGAAACCGAGAAAAGATGGAAACATTCC
TCTAAATAAATAAGTCTAATTTGTAAAAAAAATTACAATAACGCCATAAGAATTCATTGA
TTAAATCCTATAAAATAAATTTCTTAATTGA>TTHERM_00585180(protein)
MEQQQTNLEYSPYIFEIESILEKRIHPKTGKTEFLVQWKQWPDDPTWEPAQNIQSFLNNN
NQKKKEDDSHSNLKQRKLQKIEDKVKRSEQANNQTQKLNDSLQYLDEQIQFLQNKYELFI
SDSETEQKKLIPDKISEIEPEQIENEENTNMMNNVQIEPIYKILDKQEVENTIYYLILFY
DEKLPQWVKQEKLIGYEDEILEYEKQIIQESTELNSKQLLETSIQSIQNENLQIEKDQKQ
EENQFKKVMDQENLEKSKNNFNRNQQFQNDIDEGDFLTDQIQDIEANFMFTYSINWKPRK
DGNIPLNKQVQFVKKITITPQEFIDQILQNKFLN