Identifiers and Description
Gene Model Identifier
TTHERM_00663830Standard Name
XRN3 (5'-3' exoribonuclease 3)Aliases
PreTt23830 | 98.m00173 | 3736.m00071Description
XRN3 XRN 5-prime-3-prime exonuclease amine-terminal protein; XRN 5'-3' exonuclease N-terminus family proteinGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
External Links
Gene Ontology Annotations
Cellular Component
- intracellular anatomical structure (IEA) | GO:0005622
Molecular Function
- exonuclease activity (IEA) | GO:0004527
- nucleic acid binding (IEA) | GO:0003676
Domains
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al., 2023)
GeneMania
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_17204.1 9.997093137033517e-262 Description: XRN 5-3 exonuclease (841 aa) Oxytricha Contig14644.0.g34 1.9997677415930956e-65 Description: XRN 5-3 exonuclease N-terminus WormBase WBGene00006964 1.9990871925214856e-61 Description: locus:xrn-2 5-3 exoribonuclease 2 homolog status:Partially_confirmed UniProt:Q9U299 protein_id:CAB54449.2 SGD YOR048C 1.0001055852164665e-60 Description: RAT1 Nuclear 5 to 3 single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as poly (A+) dependent and independent mRNA transcription termination DictyBase DDB_G0276137 2.9997246065828143e-59 Description: xrn1 on chromosome: 2 position 6232603 to 6238286 Stentor Coeruleus SteCoe_17518 2.8625185805493937e-20 Description: None
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00663830(coding)
ATGGGTGTACCAGGCTATTTTAGTTGGATTCACAGAAAGTATCCTTATCAAGTCAGAAAA
GTTAGACGCAACGGAAGAAAGAAACACATCGACTGCCTTTACATAGATGTAAACGGTATT
TGCTACTAATACGCTAGAGATGAGCACCAATATAACTATTTACTCAAACCTAAATCTCTT
GAAACTATATTTAAGCAAGTCATTGATCACATCGACTCAATTATCGAACTAGTAGAGCCT
TAGCTCTAAGTTTATCTTATGTTAGATGGTCCATGCCCAAGAGCAAAGATGAACTAGCAA
AGACAAAGAAGATTCCATGCTGAAATGCATCATTTAACATTGAAGGATGAGCTCAAAAAG
CATGGATTTGATGTGAAGGAAGAAACCGTACCAAATAATTCAATTGCTCCAGGAACTCCT
TTTATGTATGAACTAAATGAGTAGTTAAGGAGATATATTGAAACTCGTATTGCTTTATCT
AACAAAGCTATGACTGATGGAGAAGCAGATCATAAAGAGCATTAGGTAAGTTACAAGAAG
CTCTAATTTATCTTGAGTGATAGTAATGCTCCTGGCGAAGGTGAACATAAAATCCTTGAA
GTAATCAGAAAACATACTAATTTGTAGCTCACACATTGTATTGTTGGAGCTGATGCAGAT
TTACTCCTCCTTTCTCTTGCAACAATTGGCAAGCGTATTTTGATTTTAAGAGAAAACTCA
AAATTTAAAGGAGATAAGACAGATCTCGAAAAAGAATTATAGAAGCTTAAGGAAGAACTT
AGTCATCCACAATTAGACTTGCACAAAGAAAGAGAGTACGATTTAGTTGACATTAATGGA
TTGAAGAGAGTAATTCTTGATAAGTATAAGAAAATGTTTGACAATAAACAAGTATAGAAT
CTAAAATATAATCCTATGTCTCTTATGGATGATTTTGTCTTTTTAAGTTTATTCGCTGGT
AATGACTTCCTTCCTCGTTAGAATTACATGCAAATTAAATCAGAAAAAGGACATAAACCT
AACATTTTAGACAAGCTTATCGAAAAATATGATAGCTATCTTGAGACTGCTACAAGTTAT
CTTAGTGATAGAGGTTTTATTAAATACAATTAAATCATAGAATTTTTTAAGCAAGTAGCC
ACTATTGAGCCTAAATTCAAGAATAATAGAATTTTCGAAGCTCCTTAAAAAGAAGAGAAA
TCGGTCTTTGATTACGTCAAAATTATGAGTTAGAAGTAAATCAATAACGTTGAAGATATT
AAGGATTAGGATTTGATTGATTACGATTTCAAAGAAGAAGACCTTAAATTATAATAGACC
AGCTCTGTAAATGAAGAAACAGAAATCCCTAAGGATATTATTCCTATTTCTGATAGCGAT
GAAGATTAGGAGGAATAAAAATAAAGCCATGATAAAGAATATCACAAAAAAAATAAAAAG
GAATAGAAAAAGCATCACAATCAACATGATAAGGATAATTAATTAGCAAGTGGAACTGAA
GATGAATAGAAAAAGTAAAAGTAGAATCAAGAAGATGATGAAGAAGATGAAATTCAGAAA
ATATTGAGTGATGAAATGAATGGTAAAGAAATTTATTTGAAAGAAAAACTAAAAGTGACG
AATTAGTAAGAATATGATTTAATTATCATGAAATATCTTGAAGGTTTTGAATTCACCCTT
CTTTACTATTTCCGTGGTATTGAGAAAGCTTCATGGAATTACTTTTACCCTCACTATTAT
GCTCCTTTAACTCAAGATGTTGTTGAATTCTTAGAAAGAAATCCTAAATTTGAAGTTAAA
TTTGTCAAAACTCAGCCATTCTAACCTTACAAGCAACTTTTAGCTATTCTTCATCCAGAC
AATGAAGCCCTCTTACCTGCCGAATTCAAAGGTTTATTTAAAAAATATCTACAACCTTTT
TGCCCTTAAATTTTAGATATTGATAAGTATGGAGCTACTATGGAGCATATGTAAATTATA
AAGCTACCTTTTATTGATGTGAATGTCTTAGAATAAGCTTACCAAGAAGGTGAAAAGGCT
CTTGAAAAGTCAAAAAATGAATATGATAAGAACAGAAATATAAGATCATAAGATTTCATT
TTTGAATATGACTTGAATTCTTCTATTAACATTCCTGTTTTTAACAAACTTGTTCACCAC
TAGATCATAGAAAAAGCTAATGTGCACATAATTCCATTTAATCATTTAGATGCAACTTTA
CCTGATAAAATTACAAATTTAACTGTAGACATGGAAAAGAAAAATGCAGAAAGACAGCAG
TTTGAATAGAAAAAGAAGTTTAAGAAGTAGGATAGAGATGACTCAGAAGAATAAAATCAA
TACGAAAAAAAAGGAAAACACCATTACAAAAATGATAATCAAGATGAAAACCAAGAATAC
TCTAAGCATGGACATGGCCATGATAGTCACAAAGGACATTAACAACATGGAGGTCATGAA
GGTCATCATAAAAATTTCCATGGTACTCATCATTAGGGACATAATAAGCAAGAAGAAGAT
GATTGA>TTHERM_00663830(gene)
ATGGGTGTACCAGGCTATTTTAGTTGGATTCACAGAAAGTATCCTTATCAAGTCAGAAAA
GTTAGACGCAACGGAAGAAAGAAACACATCGACTGCCTTTACATAGATGTAAACGGTATT
TGCTACTAATACGCTAGAGATGAGCACCAATATAACTATTTACTCAAACCTAAATCTCTT
GAAACTATATTTAAGCAAGTCATTGATCACATCGACTCAATTATCGAACTAGTAGAGCCT
TAGCTCTAAGTTTATCTTATGTTAGGTAAAATTTTCTAACACTTATATTATTTTAAACGC
TATTAATTTAACATTTTTTTTGTATTTTCTTTACTGATCCAATTGAAACGGTAATTCTTA
TACCTGAGGTTTTCAAATATGAAATCAGAAGAATACTTGGGTCTTCATGTTATTCAAAAC
AATTTTTTTTAATATTTAGCTTAGCAAATCCATTCTAACCAAATTTGAGTGGTTTTGAAA
GCTATTTTTGCATGATGAGATTCAAAAAAAATTAATTTTAATTAAAACTTTTCGCCATCT
TTTATATTTAAAAAATTATTCTTAAAAAAGATGGTCCATGCCCAAGAGCAAAGATGAACT
AGCAAAGACAAAGAAGATTCCATGCTGAAATGCATCATTTAACATTGAAGGATGAGCTCA
AAAAGCATGGATTTGATGTGAAGGAAGAAACCGTACCAAATAATTCAATTGCTCCAGGAA
CTCCTTTTATGTATGAACTAAATGAGTAGTTAAGGAGATATATTGAAACTCGTATTGCTT
TATCTAACAAAGCTATGACTGATGGAGAAGCAGATCATAAAGAGCATTAGGTAAGTTACA
AGAAGCTCTAATTTATCTTGAGTGATAGTAATGCTCCTGGCGAAGGTGAACATAAAATCC
TTGAAGTAATCAGAAAACATACTAATTTGTAGCTCACACATTGTATTGTTGGAGCTGATG
CAGATTTACTCCTCCTTTCTCTTGCAACAATTGGCAAGCGTATTTTGATTTTAAGAGAAA
ACTCAAAATTTAAAGGAGATAAGGTATTTATTTATTTAATAGACTCTTTAATTATTAATT
TTATTAATTAAAAAAATTAATTAAAACAGACAGATCTCGAAAAAGAATTATAGAAGCTTA
AGGAAGAACTTAGTCATCCACAATTAGACTTGCACAAAGAAAGAGAGTACGATTTAGTTG
ACATTAATGGATTGAAGAGAGTAATTCTTGATAAGTATAAGAAAATGTTTGACAATAAAC
AAGTATAGAATCTAAAATATAATCCTATGTCTCTTATGGATGATTTTGTCTTTTTAAGTT
TATTCGCTGGTAATGACTTCCTTCCTCGTTAGAATTACATGCAAATTAAATCAGAAAAAG
GACATAAACCTAACATTTTAGACAAGCTTATCGAAAAATATGATAGCTATCTTGAGACTG
CTACAAGTTATCTTAGTGATAGAGGTTTTATTAAATACAATTAAATCATAGAATTTTTTA
AGCAAGTAGCCACTATTGAGCCTAAATTCAAGAATAATAGAATTTTCGAAGCTCCTTAAA
AAGAAGAGAAATCGGTCTTTGATTACGTCAAAATTATGAGTTAGAAGTAAATCAATAACG
TTGAAGATATTAAGGATTAGGATTTGATTGATTACGATTTCAAAGAAGAAGACCTTAAAT
TATAATAGACCAGCTCTGTAAATGAAGAAACAGAAATCCCTAAGGATATTATTCCTATTT
CTGATAGCGATGAAGATTAGGAGGAATAAAAATAAAGCCATGATAAAGAATATCACAAAA
AAAATAAAAAGGAATAGAAAAAGCATCACAATCAACATGATAAGGATAATTAATTAGCAA
GTGGAACTGAAGATGAATAGAAAAAGTAAAAGTAGAATCAAGAAGATGATGAAGAAGATG
AAATTCAGAAAATATTGAGTGATGAAATGAATGGTAAAGAAATTTATTTGAAAGAAAAAC
TAAAAGTGACGAATTAGTAAGAATATGATTTAATTATCATGAAATATCTTGAAGGTTTTG
AATTCACCCTTCTTTACTATTTCCGTGGTATTGAGAAAGCTTCATGGAATTACTTTTACC
CTCACTATTATGCTCCTTTAACTCAAGATGTTGTTGAATTCTTAGAAAGAAATCCTAAAT
TTGAAGTTAAATTTGTCAAAACTCAGCCATTCTAACCTTACAAGCAACTTTTAGCTATTC
TTCATCCAGACAATGAAGCCCTCTTACCTGCCGAATTCAAAGGTTTATTTAAAAAATATC
TACAACCTTTTTGCCCTTAAATTTTAGATATTGATAAGTATGGAGCTACTATGGAGCATA
TGTAAATTATAAAGCTACCTTTTATTGATGTGAATGTCTTAGAATAAGCTTACCAAGAAG
GTGAAAAGGCTCTTGAAAAGTCAAAAAATGAATATGATAAGAACAGAAATATAAGATCAT
AAGATTTCATTTTTGAATATGACTTGAATTCTTCTATTAACATTCCTGTTTTTAACAAAC
TTGTTCACCACTAGATCATAGAAAAAGCTAATGTGCACATAATTCCATTTAATCATTTAG
ATGCAACTTTACCTGATAAAATTACAAATTTAACTGTAGACATGGAAAAGAAAAATGCAG
AAAGACAGCAGTTTGAATAGAAAAAGAAGTTTAAGAAGTAGGATAGAGATGACTCAGAAG
AATAAAATCAATACGAAAAAAAAGGAAAACACCATTACAAAAATGATAATCAAGATGAAA
ACCAAGAATACTCTAAGCATGGACATGGCCATGATAGTCACAAAGGACATTAACAACATG
GAGGTCATGAAGGTCATCATAAAAATTTCCATGGTACTCATCATTAGGGACATAATAAGC
AAGAAGAAGATGATTGA>TTHERM_00663830(protein)
MGVPGYFSWIHRKYPYQVRKVRRNGRKKHIDCLYIDVNGICYQYARDEHQYNYLLKPKSL
ETIFKQVIDHIDSIIELVEPQLQVYLMLDGPCPRAKMNQQRQRRFHAEMHHLTLKDELKK
HGFDVKEETVPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGEADHKEHQVSYKK
LQFILSDSNAPGEGEHKILEVIRKHTNLQLTHCIVGADADLLLLSLATIGKRILILRENS
KFKGDKTDLEKELQKLKEELSHPQLDLHKEREYDLVDINGLKRVILDKYKKMFDNKQVQN
LKYNPMSLMDDFVFLSLFAGNDFLPRQNYMQIKSEKGHKPNILDKLIEKYDSYLETATSY
LSDRGFIKYNQIIEFFKQVATIEPKFKNNRIFEAPQKEEKSVFDYVKIMSQKQINNVEDI
KDQDLIDYDFKEEDLKLQQTSSVNEETEIPKDIIPISDSDEDQEEQKQSHDKEYHKKNKK
EQKKHHNQHDKDNQLASGTEDEQKKQKQNQEDDEEDEIQKILSDEMNGKEIYLKEKLKVT
NQQEYDLIIMKYLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLTQDVVEFLERNPKFEVK
FVKTQPFQPYKQLLAILHPDNEALLPAEFKGLFKKYLQPFCPQILDIDKYGATMEHMQII
KLPFIDVNVLEQAYQEGEKALEKSKNEYDKNRNIRSQDFIFEYDLNSSINIPVFNKLVHH
QIIEKANVHIIPFNHLDATLPDKITNLTVDMEKKNAERQQFEQKKKFKKQDRDDSEEQNQ
YEKKGKHHYKNDNQDENQEYSKHGHGHDSHKGHQQHGGHEGHHKNFHGTHHQGHNKQEED
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