Identifiers and Description
Gene Model Identifier
TTHERM_00941450Standard Name
RPB5 (RNA polymerase II subunit 5)Aliases
PreTt25151 | 171.m00060Description
RPB5 RNA polymerase Rpb5 carboxy-terminal domain protein; Subunit shared in RNA polymerases I- II & IIIGenome Browser (Macronucleus)
Genome Browser (Micronucleus)
External Links
Gene Ontology Annotations
Molecular Function
- DNA binding (IEA) | GO:0003677
- DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899
Biological Process
- transcription (IEA) | GO:0006350
Domains
Gene Expression Profile
Vegetative Cell Cycle (Zhang et al., 2023)
GeneMania
Tetrahymena Stock Center
No Data fetched for Tetrahymena Stock Center
Homologs
Source Identifier Score Tetrahymena borealis EI9_19596.1 7.996706633065278e-159 Description: RNA polymerase Rpb5 domain-containing protein (277 aa) WormBase WBGene00019246 6.999211576891585e-27 Description: locus:rpb-5 DNA-directed RNA polymerases I, II, and III subunit RPABC1 status:Confirmed UniProt:Q9N5K2 protein_id:CCD72467.1 DictyBase DDB_G0291636 9.998720540547892e-23 Description: rpb5 on chromosome: 6 position 457932 to 458567 Oxytricha Contig486.1.g67 9.998720540547892e-23 Description: RNA polymerase Rpb5, C-terminal domain SGD YBR154C 1.0002869940498747e-21 Description: RPB5 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III; contacts DNA and affects transactivation
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00941450(coding)
ATGAGCGAGGATTAGAGAAAGAGTGCCTAAAAGTGGTTTAAGGTTTACCGCACTATTTGC
GAAATGGCCAGAGATAGAGGATACAGCGAAGAAGCTGAGCAATAGTTGAATCTGATTAAA
ACTAAGGAATAGGAAAATATGTGGATTTAAAACAGCATGTCTAACGTTCAAAACAGTTTA
ACCATAAATTCTTTTTCACATGATGCTAACCAAACTGATGAACACAAATTTTTAGGAATG
GAATAGCACCTTTACGTTTTCCATAGCTAAACTAAGTTAACCGATGATATACTTAGCTCA
TATGATAAGACTATTTAAAAATATCACGAGTCTTCTATTAAAAACAATCCTTAATTGAAC
GTTTTTATTAATGTTGTTATTCTTGTCCCAGAAGAAAAAGATATCGTCACTAAGAAAGTT
TAAGATATCATTCTCATCTCAAACAAGTATTTTAAAGATAGAATTGAACTCTTTGAAAAG
AGATAGGTTGAAATGAACTTCAACAGTAAAAAGTAAACTGATATTAAATCTGAAACAGAT
GATAAAGGCGATGTCATTTAAATCTTCTATAAATATGAAATTTTCTTCTTTGATGATCTT
GTCATTAACATCACCAAGCATCAATTAGTTCCTAAGCACGTACCCTTGAATGCCATCGAA
AAGAAAAAATTAATGGATAAATACAAAATTAACGATGCTTAACTCCCTAAGATCCTTTCC
ACCGACCCAATTACAAAATATTTTGGATTAAGGACAAAGCAAGTTTTCAAAATAGAAAGA
GATTCTGAAACTGCTGGTAAATATATTACTTATAGAATTGTTAGTTGA>TTHERM_00941450(gene)
ATGAGCGAGGATTAGAGAAAGAGTGCCTAAAAGTGGTTTAAGGTTTACCGCACTATTTGC
GAAATGGCCAGAGATAGAGGTAATCTAATTTAACTAATAAATTAAATAACTCTTAGTTCG
AAATATGCATACTTTCATTTCAAAATTTTCAGATGATCGTAGTGCACAATATTGTTAAAA
AAAGCCTTTTGTATAAAAGATAAGTGTATTAATAAGATTTTATGCAAGCGAATGATAAGC
AAAATTAATTAATTAAAATATTTTTCAGAAACAAAATAAAAAGATTAAGTTTGTTGATAA
ATAAACTGCAACTATAAAATAAATAATCTGAATTTAGCTATTTAATTGAATTTTTTATCT
TGCTAATTAAAGGATACAGCGAAGAAGCTGAGCAATAGTTGAATCTGATTAAAACTAAGG
AATAGGAAAATATGTGGATTTAAAACAGCATGTCTAACGTTCAAAACAGTTTAACCATAA
ATTCTTTTTCACATGATGCTAACCAAACTGATGAACACAAATTTTTAGGAATGGAATAGC
ACCTTTACGTTTTCCATAGCTAAACTAAGTTAACCGATGATATACTTAGCTCATATGATA
AGACTATTTAAAAATATCACGAGTCTTCTATTAAAAACAATCCTTAATTGAACGTTTTTA
TTAATGTTGTTATTCTTGTCCCAGAAGAAAAAGATATCGTCACTAAGAAAGTTTAAGATG
TACTTAAATTTTTTATTTCTAGACACATTGCTTTCTACTTGATTTTATTATATTAATAAA
TTAATAAATAAATAAATTGGATTATTAGAATTATTTTATTTTAGAATATCTTATTAAAAT
AATTTGAAAAATTTACTAAAAACATTTTTAATCAATAATAATTATAGATCATTCTCATCT
CAAACAAGTATTTTAAAGATAGAATTGAACTCTTTGAAAAGAGATAGGTTGAAATGAACT
TCAACAGTAAAAAGTAAACTGATATTAAATCTGAAACAGATGATAAAGGCGATGTCATTT
AAATCTTCTATAAATATGAAATTTTCTTCTTTGATGATCTTGTCATTAACATCACCAAGC
ATCAATTAGTTCCTAAGCACGTACCCTTGAATGCCATCGAAAAGAAAAAATTAATGGATA
AATAGTAAAAAAATATTTTTTTTATTTGTATTTCGTTTAAACAATTTTTTTAATAAAAGC
AAAATTAACGATGCTTAACTCCCTAAGATCCTTTCCACCGACCCAATTACAAAATATTTT
GGATTAAGGACAAAGCAAGTAATAAATTTAAAATAAAAAATAAATGGCAATAATATTAAT
TATTAACTATAAATTTACTAGGTTTTCAAAATAGAAAGAGATTCTGAAACTGCTGGTAAA
TATATTACTTATAGAATTGTTAGTTGA>TTHERM_00941450(protein)
MSEDQRKSAQKWFKVYRTICEMARDRGYSEEAEQQLNLIKTKEQENMWIQNSMSNVQNSL
TINSFSHDANQTDEHKFLGMEQHLYVFHSQTKLTDDILSSYDKTIQKYHESSIKNNPQLN
VFINVVILVPEEKDIVTKKVQDIILISNKYFKDRIELFEKRQVEMNFNSKKQTDIKSETD
DKGDVIQIFYKYEIFFFDDLVINITKHQLVPKHVPLNAIEKKKLMDKYKINDAQLPKILS
TDPITKYFGLRTKQVFKIERDSETAGKYITYRIVS