Identifiers and Description

Gene Model Identifier

TTHERM_00095540

Standard Name

CBF5 (Centromere Binding Factor 5)

Aliases

PreTt22853 | 7.m00302

Description

CBF5 tRNA pseudouridine synthase; Putative rRNA pseudouridine synthase

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Biological Process

• pollen-pistil interaction (IEA) | GO:0009875
• protein deglycosylation (IEA) | GO:0006517

Domains

• ( PF00831 ) ribosomal protein L29
• ( PF01472 ) PUA domain
• ( PF01509 ) TruB family pseudouridylate synthase (N
• ( PF08068 ) DKCLD (NUC011) domain
• ( PF08660 ) Oligosaccharide biosynthesis protein Alg14 like
• ( TIGR00012 ) ribosomal protein L29
• ( TIGR00425 ) rRNA pseudouridine synthase, putative
• ( TIGR00431 ) tRNA pseudouridine synthase B
• ( TIGR00451 ) uncharacterized domain 2

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_38151	0
	Description: None
WormBase	WBGene00010478	9.997093137033517e-262
	Description: Putative H/ACA ribonucleoprotein complex subunit 4 status:Confirmed UniProt:O17919 protein_id:CAB07244.1
Tetrahymena borealis	EI9_00259.1	9.997093137033517e-262
	Description: rRNA pseudouridine synthase, family protein (426 aa)
DictyBase	DDB_G0281933	9.997093137033517e-262
	Description: nola4 on chromosome: 3 position 5161271 to 5163028
Oxytricha	Contig17910.0.g6	9.997093137033517e-262
	Description: DKCLD (NUC011) domain
SGD	YLR175W	9.997093137033517e-262
	Description: CBF5 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), acts on both large and small rRNAs and on snRNA U2; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00095540(coding)
ATGGGTAAAGATAAGAAGAAGCAAAGAAAGCAATCAAGCGAAGTTGCTGAAGTTGAAGAG
CAAGTCGTCGCTTAAGATTTTATTAAACCTTCCAAGGGAGGCGCTAAGTTGGATGCTAGC
CAATGGCCCTTATTATTAAAGAATTACGATAAGATGAACATCAGATCATCTCACTACACC
CCCATTCCTAACGGATCTAACCCCCTAGCTAGACCCATGGAAGAACATTTAAAATATGGT
GTTATGAATTTGGATAAGCCTTCTAACCCCTCTTCTCACGAAGTTGTCGCATGGGTTAAG
AAGTTGTTCGAAAATATCACTAAGATGGAAAAGACCGGTCACTCTGGTACCCTTGATCCT
AAGGTTACTGGTTGTTTGATCGTTTGTTTGAACCGTGCTACTAGATTGGTTAAGGCTCAA
TAGAGCGCTGGTAAGGAATACGTTGGTATTGTTAGACTCCACAACGATATTGAATCCGAA
CTCAAGCTCGCTAAGGCCCTCCAACAATTGACTGGTCCCCTTTTCCAAAAGCCCCCTCTT
ATTTCCGCTGTCAAGAGAGAATTGAGAGTTAGAACTATTTATGAATCTAAGTTAATTGAA
TACAATCCCGAAAAGAAGATGGGTATCATCTGGATGAGTTGCGAAGCTGGTACTTACGTT
AGAACCCTCTGTGTCCACTTAGGTCTCTTACTCGGTACTGGTGGTCATATGGAAGAACTT
AGAAGAGTTCGTTCTGGTATCCTCGACGAAAACTAATATCTCGTCACCATGCACGACGTC
AAGGACTCTATCTGGAGATATCAACACTTCAAGGATGAATCTTATCTCAGACGTGTTGTT
TTACCTCTTGAAGTTTTACTTACTAGTTTCCCTCGTATTGTCGTTAAGGATTCTACCGTT
AACTCTATCTGTTATGGTGCTAAGCTCATGCTCCCTGGTGTCCTCCGTTATGACAACAAC
ATTGAAAACGGTAAGGAAGTAGTTTTGATCACCACCAAGGGTGAAGCTATCGCTGTTGCT
GTTGCTTAAATGACCACCTCCGAACTCGCCACCTGCGATCACGGTATCGTCTGCAAGACC
AAGAGAGTTATTATGGACAGAGACCTCTATCCCAAGAGATGGGGTTTGGGTCCTAGAGCC
TTAAGAAAGAAAAACCTCATCAAGGAAGGTCTCTTAGATAAGCACGGAAAGCCCAACGAT
TAAACACCTAACGACTGGACTGTTTTCTACGTTAATGAAGAAAATAACAACATCCCCAAG
CCTGAAGAAAATTGA

>TTHERM_00095540(gene)
ATGGGTAAAGATAAGAAGAAGCAAAGAAAGCAATCAAGCGAAGTTGCTGAAGTTGAAGAG
CAAGTCGTCGCTTAAGATTTTATTAAACCTTCCAAGGGAGGCGCTAAGTTGGATGCTAGC
CAATGGCCCTTATTATTAAAGAATTACGATAAGATGAACATCAGATCATCTCACTACACC
CCCATTCCTAACGGATCTAACCCCCTAGCTAGACCCATGGAAGAACATTTAAAATATGGT
GTTATGAATTTGGATAAGCCTTCTAACCCCTCTTCTCACGAAGTTGTCGCATGGGTTAAG
AAGTTGTTCGAAAATATCACTAAGATGGAAAAGACCGGTCACTCTGGTACCCTTGATCCT
AAGGTTACTGGTTGTTTGATCGTTTGTTTGAACCGTGCTACTAGATTGGTTAAGGCTCAA
TAGAGCGCTGGTAAGGAATACGTTGGTATTGTTAGACTCCACAACGATATTGAATCCGAA
CTCAAGCTCGCTAAGGCCCTCCAACAATTGACTGGTCCCCTTTTCCAAAAGCCCCCTCTT
ATTTCCGCTGTCAAGAGAGAATTGAGAGTTAGAACTATTTATGAATCTAAGTTAATTGAA
TACAATCCCGAAAAGAAGATGGGTATCATCTGGATGAGTTGCGAAGCTGGTACTTACGTT
AGAACCCTCTGTGTCCACTTAGGTCTCTTACTCGGTACTGGTGGTCATATGGAAGAACTT
AGAAGAGTTCGTTCTGGTATCCTCGACGAAAACTAATATCTCGTCACCATGCACGACGTC
AAGGACTCTATCTGGAGATATCAACACTTCAAGGATGAATCTTATCTCAGACGTGTTGTT
TTACCTCTTGAAGTTTTACTTACTAGTTTCCCTCGTATTGTCGTTAAGGATTCTACCGTT
AACTCTATCTGTTATGGTGCTAAGCTCATGCTCCCTGGTGTCCTCCGTTATGACAACAAC
ATTGAAAACGGTAAGGAAGTAGTTTTGATCACCACCAAGGGTGAAGCTATCGCTGTTGCT
GTTGCTTAAATGACCACCTCCGAACTCGCCACCTGCGATCACGGTATCGTCTGCAAGACC
AAGAGAGTTATTATGGACAGAGACCTCTATCCCAAGAGATGGGGTTTGGGTCCTAGAGCC
TTAAGAAAGAAAAACCTCATCAAGGAAGGTCTCTTAGATAAGCACGGAAAGCCCAACGAT
TAAACACCTAACGACTGGACTGTTTTCTACGTTAATGAAGAAAATAACAACATCCCCAAG
CCTGAAGAAAATTGA

>TTHERM_00095540(protein)
MGKDKKKQRKQSSEVAEVEEQVVAQDFIKPSKGGAKLDASQWPLLLKNYDKMNIRSSHYT
PIPNGSNPLARPMEEHLKYGVMNLDKPSNPSSHEVVAWVKKLFENITKMEKTGHSGTLDP
KVTGCLIVCLNRATRLVKAQQSAGKEYVGIVRLHNDIESELKLAKALQQLTGPLFQKPPL
ISAVKRELRVRTIYESKLIEYNPEKKMGIIWMSCEAGTYVRTLCVHLGLLLGTGGHMEEL
RRVRSGILDENQYLVTMHDVKDSIWRYQHFKDESYLRRVVLPLEVLLTSFPRIVVKDSTV
NSICYGAKLMLPGVLRYDNNIENGKEVVLITTKGEAIAVAVAQMTTSELATCDHGIVCKT
KRVIMDRDLYPKRWGLGPRALRKKNLIKEGLLDKHGKPNDQTPNDWTVFYVNEENNNIPK
PEEN