Identifiers and Description

Gene Model Identifier

TTHERM_00105330

Standard Name

RPS28 (Ribosomal Protein of the Small subunit 28)

Aliases

PreTt23033 | 7.m00482

Description

RPS28 40S ribosomal protein S28e putative; Homolog of yeast RPS28- human RPS28;

Genome Browser (Macronucleus)

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No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• asparagine metabolic process (IEA) | GO:0006528
• negative regulation of biosynthetic process (IEA) | GO:0009890
• pyrimidine ribonucleotide catabolic process (IEA) | GO:0009222

Domains

• ( PF01200 ) ribosomal protein S28e

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_00370.1	5.998312950603665e-35
	Description: ribosomal protein S28e containing protein (69 aa)
Oxytricha	Contig12436.0.g46	2.99851380290819e-19
	Description: Ribosomal protein S28e
SGD	YOR167C	4.0009493637353324e-18
	Description: RPS28A Protein component of the small (40S) ribosomal subunit; nearly identical to Rps28Bp and has similarity to rat S28 ribosomal protein
WormBase	WBGene00004497	7.9993595954329e-16
	Description: locus:rps-28 40S ribosomal protein S28 status:Confirmed UniProt:Q95Y04 protein_id:CCD66705.1
DictyBase	DDB_G0285597	0.000000000000020000882446601127
	Description: rps28 on chromosome: 4 position 3428530 to 3429424

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00105330(coding)
ATGAATACCGAAGAAACTACTAAGGCTAGAATTATGGATGTCCTCGGAAAGACTGGTTCC
AGAGGTGGTATTACCCAAGTTAGAGTCGTATTGATCAGTGGTAAGGAAGAAGGTAGATAA
CTTATTAGAAACGTCAAGGGTGCCTGCAGAGTCGGTGACGTCCTCGAACTTATGGAATGT
GAAAGAGAAGCCAGAAGATTAAGATGA

>TTHERM_00105330(gene)
ATGAATACCGAAGAAACTACTAAGGCTAGAATTATGGATGTCCTCGGAAAGACTGGTAAT
TAATTTAAGATATGAATCACTTCAAATAGTGAACGCGAAAAATTTCCTGAAAAGTTTAGA
TGAAATTTTTGAAAATTAGTTGCCATTTCTCCATTTGAGGAGGGAGCATTATTAATTCAT
AATGCTCAAAATATATATTCATTTGAATACAAATAAAAGCGACTTTAATATGTTCAGTGA
TAGAAAAATGATTGAATTATCATAAAAGGAATAAAAAAATAAAATGGTTTTTTGGGAATT
TTCGCTTATCAACTAGATTTTGTGATGATTTTATTGATGAAATTAAAGAAATGAAAGAAG
GAAATTTTAATAATATTTTTATCTATTTTTATAGGTTCCAGAGGTGGTATTACCCAAGTT
AGAGTCGTATTGATCAGTGGTAAGGAAGAAGGTAGATAACTTATTAGAAACGTCAAGGGT
GCCTGCAGAGTCGGTGACGTCCTCGAACTTATGGAATGTGAAAGAGAAGCCAGAAGATTA
AGATGA

>TTHERM_00105330(protein)
MNTEETTKARIMDVLGKTGSRGGITQVRVVLISGKEEGRQLIRNVKGACRVGDVLELMEC
EREARRLR