Identifiers and Description

Gene Model Identifier

TTHERM_00213600

Standard Name

RFC3 (Replication factor C subunit 3)

Aliases

PreTt13842 | 17.m00449

Description

RFC3 replication factor C subunit 5; Subunit of Replication factor C (RF-C)- which acts as a clamp loader of the proliferating cell nuclear antigen (PCNA)

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

Biological Process

Domains

  • ( PF00004 ) ATPase, AAA family
  • ( PF00071 ) Ras family
  • ( PF00255 ) glutathione peroxidase
  • ( PF01078 ) Magnesium chelatase, subunit ChlI
  • ( PF01926 ) GTPase of unknown function
  • ( PF03215 ) Rad17 cell cycle checkpoint protein
  • ( PF04851 ) type III restriction enzyme, res
  • ( PF06144 ) DNA polymerase III, delta subunit
  • ( PF07726 ) ATPase family associated with various
  • ( PF07728 ) ATPase family associated with various
  • ( PF08542 ) Replication factor C
  • ( TIGR00678 ) DNA polymerase III, delta' subunit
  • ( TIGR01618 ) phage nucleotide-binding protein
  • ( TIGR02397 ) DNA polymerase III, subunit gamma
  • ( TIGR02928 ) orc1/cdc6 family replication initiation protein

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_16737.1 9.997093137033517e-262
Description: hypothetical protein (345 aa)
Oxytricha Contig21432.0.g8 2.0000857274312427e-108
Description: ATPase family associated with various cellular activities (AAA)
DictyBase DDB_G0282235 3.999582750711782e-108
Description: rfc5 on chromosome: 3 position 5553806 to 5555127
SGD YNL290W 9.001030883757984e-98
Description: RFC3 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon
WormBase WBGene00018409 5.0014751778710277e-85
Description: Probable replication factor C subunit 5 status:Partially_confirmed UniProt:P34429 protein_id:CCD63451.1
Stentor Coeruleus SteCoe_23189 4.1863939993042314e-51
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00213600(coding)
ATGGAAGAGGAAATACCCATTACAGTTGAAACCAAATAGAAGTAATAGAATATTCCTTGG
GTTGAAAAATACAGACCTGAGAACTTAGATAATGTCATTTCACATGAGTATATTGTTGCA
ACAATTAAGAAATTTATTGAAGAAGATAAGAAGCTTCCTAATTTATTGTTTTATGGACCT
CCAGGAACAGGTAAGACCTCATTAATAGTAGCTTTAGCCAAATAGTTGTATGGAAAGAAT
TATAAATAGCTTGTTTTAGAACTTAACGCTTCTGATGATAGAGGTATTGACGTTGTTAGA
GAACAAATCAAAACTTTTGCAAGTACTGCCAATTTCGGTATGGTTGGAAAAGGAACTAAA
TTAATTATTTTGGATGAAGCAGACTCTATGACAAATCAAGCTCAGTTTGCTTTGAGAAGA
ATTATTGAAAAATACAGCAGCAATGCTAGATTTTGCATGATATGTAATTACGTCTCAAAA
ATTATTCCTGCTCTCCAATCAAGATGCACAAGATTTAAGTTCAAGCATATTCCTTATTAA
GATGCTAAACTTAGAATTGCATAAATTTGCAATGCTGAAAATTTAAAATATAAAAATTCT
GGTATTGAAGCAGTATTCAAGCTTTGCGATGGAGATATGAGAAGAGTTGTAAATATGCTT
CAATCTCTTTCTTTATAAGGATATGGAAGTGATGAATAAGTAGAAATAACTGATGAATTA
GTTTATAAATTTACAGGTAATGCAACACCAAAAGACATTGAAAATATTATTAACACCATG
AATAATAAATCCATTTCAGAATCATATGAAATAATATAGAGTTACTAGGTAGAAAAAGGT
ATCTCCTTATAAGTTATGTTGAAAGAAATAAGTCTTTTTTTGATGAATACCTCATATCCT
AGCTTAGCACTTGAATTTTTAGTTAAAAGATTGGCAGATCTTGAATATAGAATGTCAATT
AACTGTGATGAAAAAGTTTAAACATTATCATTAATAAGTGCCTTCACAGAAGTTCGTTAG
CTTTTAAGAAGACCTTGA


>TTHERM_00213600(gene)
ATGGAAGAGGAAATACCCATTACAGTTGTAAAATAAAGCTAAAGCATTTTTACAAAATTG
TAATTCGTTTGTTTTTTATTAGGAAACCAAATAGAAGTAATAGAATATTCCTTGGGTTGA
AAAATACAGACCTGAGAACTTAGATAATGTCATTTCACATGAGTATATTGTTGCAACAAG
TAAATAAAATTTGAAAGCTAATCAGAATAAATAAGCAAACAACTTTTTTATTACATTTTT
TAATAGTTAAGAAATTTATTGAAGAAGATAAGAAGCTTCCTAATTTATTGTTTTATGGAC
CTCCAGGAACAGGTGATTCATTCATATCAACTTTTTTTGTACAATATATATAAATTATTA
TTATATAAAACAGGTAAGACCTCATTAATAGTAGCTTTAGCCAAATAGTTGTATGGAAAG
AATTATAAATAGCTTGTTTTAGAAGTAATTTAGCTCAATTTATTTTAATTAGTGATAAGG
TTTTATTAAAAAAAGCTTAACGCTTCTGATGATAGAGGTATTGACGTTGTTAGAGAACAA
ATCAAAACTTTTGCAAGTACTGCCAATTTCGGTATGGTTGGGTAAATAAATATTAAAATT
TTATATAGATTTCATTGAAAAATAAATAGCAGAAAGGCATACATGTAGCCTTCAAGAAGT
ACTTGCAAGAATATTAAAATATTTTGAAATAAATTTAAAATTTGATAATAATAATAAAAA
TTAAAAGAAAAGGAACTAAATTAATTATTTTGGATGAAGCAGACTCTATGACAAATCAAG
CTCAGTTTGCTTTGAGAAGAAGTAAAATGAAATAAAAAACTAGTTTATAGGAAAAAATAA
TTATTTTCAATTAATTTATTAGTTATTGAAAAATACAGCAGCAATGCTAGATTTTGCATG
ATATGTAATTACGTCTCAAAAATTATTCCTGCTCTCCAATCAAGATGCACAAGATTTAAG
TTCAAGCATATTCCTTATTAAGATGCTAAACTTAGAATTGCATAAATTTGCAATGCTGAA
AATTTAAAATATAAAAATTCTGGTATTGAAGCAGTATTCAAGCTTTGCGATGGAGATATG
AGAAGAGTTGTAAATATGCTTCAAGTAAATAAAATATTAAAATATGTTAATGGAAATAAT
TTACTTATTTATTTTTTTAAAAACAAAAATAGTCTCTTTCTTTATAAGGATATGGAAGTG
ATGAATAAGTAGAAATAACTGATGAATTAGTTTATAAATTTACAGGTAATGCAACACCAA
AAGACATTGAAAATATTATTAACACCATGAATAATAAATCCATTTCAGAATCATATGAAA
GTAAATTAATTAATTAAATCTGCTTTAAAATAAATTTTATAAAAAATCGAATTATTTATT
AGTAATATAGAGTTACTAGGTAGAAAAAGGTATCTCCTTATAAGTTATGTTGAAAGAAAT
AAGTCTTTTTTTGATGAATACCTCATATCCTAGCTTAGCACTTGAATTTTTAGTTAAAAG
ATTGGCAGATCTTGAATATAGAATGTCAATTAACTGTGATGAAAAAGTTTAAACATTATC
ATTAATAAGTGCCTTCACAGAAGTTCGTTAGCTTTTAAGAAGACCTTGA


>TTHERM_00213600(protein)
MEEEIPITVETKQKQQNIPWVEKYRPENLDNVISHEYIVATIKKFIEEDKKLPNLLFYGP
PGTGKTSLIVALAKQLYGKNYKQLVLELNASDDRGIDVVREQIKTFASTANFGMVGKGTK
LIILDEADSMTNQAQFALRRIIEKYSSNARFCMICNYVSKIIPALQSRCTRFKFKHIPYQ
DAKLRIAQICNAENLKYKNSGIEAVFKLCDGDMRRVVNMLQSLSLQGYGSDEQVEITDEL
VYKFTGNATPKDIENIINTMNNKSISESYEIIQSYQVEKGISLQVMLKEISLFLMNTSYP
SLALEFLVKRLADLEYRMSINCDEKVQTLSLISAFTEVRQLLRRP