Identifiers and Description

Gene Model Identifier

TTHERM_00243900

Standard Name

SWI1

Aliases

PreTt02385 | 21.m00216

Description

ARID/bright DNA-binding domain protein; ARID/BRIGHT DNA binding domain containing protein. Member of the SWI/SNF complex.

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

Biological Process

  • negative regulation of protein kinase activity (IEA) | GO:0006469

Domains

  • ( PF00514 ) Armadillo/beta-catenin-like repeat
  • ( PF01388 ) ARID/BRIGHT DNA binding domain

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_21088.1 9.997093137033517e-262
Description: arid/bright DNA binding domain-containing protein (654 aa)
Oxytricha Contig1044.0.g66 4.000437458487249e-40
Description: ARID/BRIGHT DNA binding domain
DictyBase DDB_G0275333 0.0000000000000299873730555305
Description: DDB_G0275333 on chromosome: 2 position 5369983 to 5371533
Stentor Coeruleus SteCoe_22303 0.0000000000006914400106940203
Description: None
WormBase WBGene00000476 0.000000000040005666873964816
Description: locus:cfi-1 AT-rich interactive domain-containing protein cfi-1 status:Confirmed UniProt:O02326 protein_id:CAB03395.3
SGD YMR176W 0.000000600201742947405
Description: ECM5 Non-essential protein of unknown function, contains ATP/GTP-binding site motif A; null mutant exhibits cellular volume up to four times greater than wild-type, also large drooping buds with elongated necks

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences 

>TTHERM_00243900(coding)
ATGAACGAGTCTGAAGAAAGTAAATCCTTTAAGGTCCAGTTAATGGAATACTGGTCATCC
AAAAATATGTCAAATATTAAAATTCCTCAAATTGGAGGACGGGAATTGGACTTCTTTAAA
TTATATAAGGCTGTTATTAAGAGAGGAGGTGCACAAGCTGTTTCTAACAACAAAATGTGG
AAGGAAATAGTCAACGAGTTCGGCTTCCCCTCCACTTGTACATCAGCCTCATTTACTTTG
AGAAACCACTATACTCGTTTCTTGCTAGGTTATGAATAAAAGTACTTTTTCCATAAAGGA
GATGAAGAAGCCATGCCTGTTTTACAAGCTGGACGCAAACGTAAGAGAAAAGATAATCAA
GATAGCAAGCAAGGTGATTCTTCTGAGACAGGATCTGATTCAGAAGAAGCAAAAGACTAA
ATTGAGAAAAAAGTAAAGCCAAACTAGCCTAATAATTTATCGATTGTTTAGCAACCAAAC
AAAGAAGATGTCAAAATATTAAATCAGTAATTTATAAGACCAAACTAATTGAAGTCAAAT
CCTTATCCAGTAATGAGAATGGAACCTCCTAAACAAGAATAAAATAAGAGCACCTTATAT
AAGTAATTAAGTGAAGCATATTAGTTGAATCAAATAAATACAAGACAAGAACTATTCTTC
ACCAGAAAGAACAAAATGTTCCCTATGGTTTAAGACATAAAGAGAATTTCACTTGCCTTC
GAAAGTAGAATATAAGATGAAATAACTTTTGCTCTAAATTAATTACTCCTCTACTCAGTT
AATAGTATGCATCAGTTTACTCTTGAAAGTTATAATCACTTGCTTGAAGGTATTGTCCAA
TATCTAGAAGAGATTATCAAGAATGTACCTTCCCTTAATAAAATTTTGCAACTTAAAGAA
ATTAAACCAAGAACTTTGTAAGAATATGGAGGTACTTCAGACTATAGCTATTCTGGACCT
CCTCCTACAAAAGAGGCATTTAAAGAGCTTTGTATCTTAGACAATTATAACTTCCCTATA
TGTGATATAGTCTTATTTAATTCTTAAAAGAAAAAGGAGGTTTCTCCTATTGTTTTCTTA
CGCAAAAGAAAGCGCTATAATGTTGAAAATCTTAAAGAAATGGCAGGAGAAGTTTATTTG
CTTGAACAAACCCGCACAATCTTTTTAATTTTAAGAAATTTTTCATTTACTAAATCGAAT
GAAGTCTACATGGCTAAAAACGAAAGATTATTATAGATAATGATTTAGCTATTTATCCTT
AATTCAGATTCTTAAATAACAAAATACATATTAGATATCTTGGCTAATATTTCAAAGCAA
ATATAACTTATGAATATTCCCGATTACAAGTTATTCTGTGAAAGGCTCTTTGAATTGCTT
AATGCTGATACAAGTGATGAACTTGAGGCTTGTGTTGACATAATCCGTAATTTGATTGCC
ATCTAAGAAAACGAAAGTATTATCGAAAACTTTTTACCAAAATACATTGACTAAGTAACT
AGACTCATGCTTTAAGCTTAGGGAGATATTAGAGAAGGCATTTTAGAGTTTCTCTGTTTC
CTCAGCGATTTACGTATGGCAACACGTGTTCAATTGGCTCGTCATCCTAAATTAATTATG
AGAATGGTTGGTCTGCTCTCTTCTGGAGTCATGAAATAAAATCGCTAACTTCCAAGCCAT
CTTTAATAACAACAGCACAACTAGCAAGGGGAAGGAGAAAGAAATTCAGAAAAAATTACT
AAATTAGCAGCCTTAACATTAAGTAATATTTCTCTAGCCCCGTTATCTCGTGCATATTTG
AAGCCTTTTGAAAGAGATTTATTTGTTGTAGCCTCAACAGATGAAACAGTAACAAAATAT
ATTTCAAATATTTTGAGTGAACTAATGAACTATGAACCTGAAAGTGATCCTGAAAGATAA
TATATGTTTTAATCAATAAACATGGCAAACATATGA


>TTHERM_00243900(gene)
ATGAACGAGTCTGAAGAAAGTAAATCCTTTAAGGTCCAGTTAATGGAATACTGGTCATCC
AAAAATATGTCAAATATTAAAATTCCTCAAATTGGAGGACGGGAATTGGACTTCTTTAAA
TTATATAAGGCTGTTATTAAGAGAGGAGGTGCACAAGCTGTTTCTAACAACAAAATGTGG
AAGGAAATAGTCAACGAGTTCGGCTTCCCCTCCACTTGTACATCAGCCTCATTTACTTTG
AGAAACCACTATACTCGTTTCTTGCTAGGTTATGAATAAAAGTACTTTTTCCATAAAGGA
GATGAAGAAGCCATGCCTGTTTTACAAGCTGGACGCAAACGTAAGAGAAAAGATAATCAA
GATAGCAAGCAAGGTGATTCTTCTGAGACAGGATCTGATTCAGAAGAAGCAAAAGACTAA
ATTGAGAAAAAAGTAAAGCCAAACTAGGTAATCATTAAAGACAATTATAATTAAAAATCT
TTTAAAGTTAATTCGAGTATATTTTGCTCATCTATCGCTCTCAAAAGGGAGTTTGTTTTA
GTTTTATAAGTAGGAGTGAATTTATTAGATTAACAATAAACATGCTATATAAAGCATAAT
TTTATAGATTAATAGAAATTTATTAAAATATCTCGTATTTTATAAGAAAATAAAATATTA
TTAAATATTATAATTGCCCTTTAATTACTCTAAAATTATCTCTCACGAGGTTTTTTTATT
CTAAATAATTCGCTTAAATAAGCTAATAAATGTTTCTTTTACTTATTTTTCCTCTTTTCC
AAACCAAACCAAGTATAAAAAATACTCTCAATATTTTGAAGAAACAAATAAAAAAATATG
TTATGCATCCAAAATCTTTATCTTAATAGCAGCAGTAGCTTGCTTTTGAAAATAATAGAT
TTTTATATTTCTAAATAAATAAAAATATTAAATATCACTTATTTGATTATCAATACAAAT
AATACAAGATTTTCAACTTTATTTACAAAATAAAAATGAATTTATTGTTTTTAAAGATAT
TTAATAGGATAGGAATAAACACGTTTATATTAAGAATTTTACTTTTTTTCATAAAGCGCA
GTTCATTTTTAACATAATTTTAAGATAAAATTCAGAATTTAATGATAATAAAACTGATAC
ATAAACATTTAAAACTTAAAAATGAAAATAAATCAAAAATATTATAGCATATTTATTTAA
TTTAATAATTATTTATTTATTTATTTATTTATTTTATCAAAAGCCTAATAATTTATCGAT
TGTTTAGCAACCAAACAAAGAAGATGTCAAAATATTAAATCAGTAATTTATAAGACCAAA
CTAATTGAAGTCAAATCCTTATCCAGTAATGAGAATGGAACCTCCTAAACAAGAATAAAA
TAAGAGCACCTTATATAAGTAATTAAGTGAAGCATATTAGTTGAATCAAATAAATACAAG
ACAAGAACTATTCTTCACCAGAAAGAACAAAATGTTCCCTATGGTTTAAGACATAAAGAG
AATTTCACTTGCCTTCGAAAGTAGAATATAAGATGAAATAACTTTTGCTCTAAATTAATT
ACTCCTCTACTCAGTTAATAGTATGCATCAGTTTACTCTTGAAAGTTATAATCACTTGCT
TGAAGGTATTGTCCAATATCTAGAAGAGATTATCAAGAATGTACCTTCCCTTAATAAAAT
TTTGCAACTTAAAGAAATTAAACCAAGAACTTTGTAAGAATATGGAGGTACTTCAGACTA
TAGCTATTCTGGACCTCCTCCTACAAAAGAGGCATTTAAAGAGCTTTGTATCTTAGACAA
TTATAACTTCCCTATATGTGATATAGTCTTATTTAATTCTTAAAAGAAAAAGGAGGTTTC
TCCTATTGTTTTCTTACGCAAAAGAAAGCGCTATAATGTTGAAAATCTTAAAGAAATGGC
AGGAGAAGTTTATTTGCTTGAACAAACCCGCACAATCTTTTTAATTTTAAGAAATTTTTC
ATTTACTAAATCGAATGAAGTCTACATGGCTAAAAACGAAAGATTATTATAGATAATGAT
TTAGCTATTTATCCTTAATTCAGATTCTTAAATAACAAAATACATATTAGATATCTTGGC
TAATATTTCAAAGCAAATATAACTTATGAATATTCCCGATTACAAGTTATTCTGTGAAAG
GCTCTTTGAATTGCTTAATGCTGATACAAGTGATGAACTTGAGGCTTGTGTTGACATAAT
CCGTAATTTGATTGCCATCTAAGAAAACGAAAGTATTATCGAAAACTTTTTACCAAAATA
CATTGACTAAGTAACTAGACTCATGCTTTAAGCTTAGGGAGATATTAGAGAAGGCATTTT
AGAGTTTCTCTGTTTCCTCAGCGATTTACGTATGGCAACACGTGTTCAATTGGCTCGTCA
TCCTAAATTAATTATGAGAATGGTTGGTCTGCTCTCTTCTGGAGTCATGAAATAAAATCG
CTAACTTCCAAGCCATCTTTAATAACAACAGCACAACTAGCAAGGGGAAGGAGAAAGAAA
TTCAGAAAAAATTACTAAATTAGCAGCCTTAACATTAAGTAATATTTCTCTAGCCCCGTT
ATCTCGTGCATATTTGAAGCCTTTTGAAAGAGATTTATTTGTTGTAGCCTCAACAGATGA
AACAGTAACAAAATATATTTCAAATATTTTGAGTGAACTAATGAACTATGAACCTGAAAG
TGATCCTGAAAGATAATATATGTTTTAATCAATAAACATGGCAAACATATGA


>TTHERM_00243900(protein)
MNESEESKSFKVQLMEYWSSKNMSNIKIPQIGGRELDFFKLYKAVIKRGGAQAVSNNKMW
KEIVNEFGFPSTCTSASFTLRNHYTRFLLGYEQKYFFHKGDEEAMPVLQAGRKRKRKDNQ
DSKQGDSSETGSDSEEAKDQIEKKVKPNQPNNLSIVQQPNKEDVKILNQQFIRPNQLKSN
PYPVMRMEPPKQEQNKSTLYKQLSEAYQLNQINTRQELFFTRKNKMFPMVQDIKRISLAF
ESRIQDEITFALNQLLLYSVNSMHQFTLESYNHLLEGIVQYLEEIIKNVPSLNKILQLKE
IKPRTLQEYGGTSDYSYSGPPPTKEAFKELCILDNYNFPICDIVLFNSQKKKEVSPIVFL
RKRKRYNVENLKEMAGEVYLLEQTRTIFLILRNFSFTKSNEVYMAKNERLLQIMIQLFIL
NSDSQITKYILDILANISKQIQLMNIPDYKLFCERLFELLNADTSDELEACVDIIRNLIA
IQENESIIENFLPKYIDQVTRLMLQAQGDIREGILEFLCFLSDLRMATRVQLARHPKLIM
RMVGLLSSGVMKQNRQLPSHLQQQQHNQQGEGERNSEKITKLAALTLSNISLAPLSRAYL
KPFERDLFVVASTDETVTKYISNILSELMNYEPESDPERQYMFQSINMANI