Identifiers and Description

Gene Model Identifier

TTHERM_00243900

Standard Name

SWI1

Aliases

PreTt02385 | 21.m00216

Description

ARID/bright DNA-binding domain protein; ARID/BRIGHT DNA binding domain containing protein. Member of the SWI/SNF complex.

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Domains

  • ( PF00514 ) Armadillo/beta-catenin-like repeat
  • ( PF01388 ) ARID/BRIGHT DNA binding domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_21088.1 9.997093137033517e-262
Description: arid/bright DNA binding domain-containing protein (654 aa)
Oxytricha Contig1044.0.g66 4.000437458487249e-40
Description: ARID/BRIGHT DNA binding domain
DictyBase DDB_G0275333 0.0000000000000299873730555305
Description: DDB_G0275333 on chromosome: 2 position 5369983 to 5371533
Stentor Coeruleus SteCoe_22303 0.0000000000006914400106940203
Description: None
WormBase WBGene00000476 0.000000000040005666873964816
Description: locus:cfi-1 AT-rich interactive domain-containing protein cfi-1 status:Confirmed UniProt:O02326 protein_id:CAB03395.3
SGD YMR176W 0.000000600201742947405
Description: ECM5 Non-essential protein of unknown function, contains ATP/GTP-binding site motif A; null mutant exhibits cellular volume up to four times greater than wild-type, also large drooping buds with elongated necks

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00243900(coding)
ATGAACGAGTCTGAAGAAAGTAAATCCTTTAAGGTCCAGTTAATGGAATACTGGTCATCC
AAAAATATGTCAAATATTAAAATTCCTCAAATTGGAGGACGGGAATTGGACTTCTTTAAA
TTATATAAGGCTGTTATTAAGAGAGGAGGTGCACAAGCTGTTTCTAACAACAAAATGTGG
AAGGAAATAGTCAACGAGTTCGGCTTCCCCTCCACTTGTACATCAGCCTCATTTACTTTG
AGAAACCACTATACTCGTTTCTTGCTAGGTTATGAATAAAAGTACTTTTTCCATAAAGGA
GATGAAGAAGCCATGCCTGTTTTACAAGCTGGACGCAAACGTAAGAGAAAAGATAATCAA
GATAGCAAGCAAGGTGATTCTTCTGAGACAGGATCTGATTCAGAAGAAGCAAAAGACTAA
ATTGAGAAAAAAGTAAAGCCAAACTAGCCTAATAATTTATCGATTGTTTAGCAACCAAAC
AAAGAAGATGTCAAAATATTAAATCAGTAATTTATAAGACCAAACTAATTGAAGTCAAAT
CCTTATCCAGTAATGAGAATGGAACCTCCTAAACAAGAATAAAATAAGAGCACCTTATAT
AAGTAATTAAGTGAAGCATATTAGTTGAATCAAATAAATACAAGACAAGAACTATTCTTC
ACCAGAAAGAACAAAATGTTCCCTATGGTTTAAGACATAAAGAGAATTTCACTTGCCTTC
GAAAGTAGAATATAAGATGAAATAACTTTTGCTCTAAATTAATTACTCCTCTACTCAGTT
AATAGTATGCATCAGTTTACTCTTGAAAGTTATAATCACTTGCTTGAAGGTATTGTCCAA
TATCTAGAAGAGATTATCAAGAATGTACCTTCCCTTAATAAAATTTTGCAACTTAAAGAA
ATTAAACCAAGAACTTTGTAAGAATATGGAGGTACTTCAGACTATAGCTATTCTGGACCT
CCTCCTACAAAAGAGGCATTTAAAGAGCTTTGTATCTTAGACAATTATAACTTCCCTATA
TGTGATATAGTCTTATTTAATTCTTAAAAGAAAAAGGAGGTTTCTCCTATTGTTTTCTTA
CGCAAAAGAAAGCGCTATAATGTTGAAAATCTTAAAGAAATGGCAGGAGAAGTTTATTTG
CTTGAACAAACCCGCACAATCTTTTTAATTTTAAGAAATTTTTCATTTACTAAATCGAAT
GAAGTCTACATGGCTAAAAACGAAAGATTATTATAGATAATGATTTAGCTATTTATCCTT
AATTCAGATTCTTAAATAACAAAATACATATTAGATATCTTGGCTAATATTTCAAAGCAA
ATATAACTTATGAATATTCCCGATTACAAGTTATTCTGTGAAAGGCTCTTTGAATTGCTT
AATGCTGATACAAGTGATGAACTTGAGGCTTGTGTTGACATAATCCGTAATTTGATTGCC
ATCTAAGAAAACGAAAGTATTATCGAAAACTTTTTACCAAAATACATTGACTAAGTAACT
AGACTCATGCTTTAAGCTTAGGGAGATATTAGAGAAGGCATTTTAGAGTTTCTCTGTTTC
CTCAGCGATTTACGTATGGCAACACGTGTTCAATTGGCTCGTCATCCTAAATTAATTATG
AGAATGGTTGGTCTGCTCTCTTCTGGAGTCATGAAATAAAATCGCTAACTTCCAAGCCAT
CTTTAATAACAACAGCACAACTAGCAAGGGGAAGGAGAAAGAAATTCAGAAAAAATTACT
AAATTAGCAGCCTTAACATTAAGTAATATTTCTCTAGCCCCGTTATCTCGTGCATATTTG
AAGCCTTTTGAAAGAGATTTATTTGTTGTAGCCTCAACAGATGAAACAGTAACAAAATAT
ATTTCAAATATTTTGAGTGAACTAATGAACTATGAACCTGAAAGTGATCCTGAAAGATAA
TATATGTTTTAATCAATAAACATGGCAAACATATGA


>TTHERM_00243900(gene)
ATGAACGAGTCTGAAGAAAGTAAATCCTTTAAGGTCCAGTTAATGGAATACTGGTCATCC
AAAAATATGTCAAATATTAAAATTCCTCAAATTGGAGGACGGGAATTGGACTTCTTTAAA
TTATATAAGGCTGTTATTAAGAGAGGAGGTGCACAAGCTGTTTCTAACAACAAAATGTGG
AAGGAAATAGTCAACGAGTTCGGCTTCCCCTCCACTTGTACATCAGCCTCATTTACTTTG
AGAAACCACTATACTCGTTTCTTGCTAGGTTATGAATAAAAGTACTTTTTCCATAAAGGA
GATGAAGAAGCCATGCCTGTTTTACAAGCTGGACGCAAACGTAAGAGAAAAGATAATCAA
GATAGCAAGCAAGGTGATTCTTCTGAGACAGGATCTGATTCAGAAGAAGCAAAAGACTAA
ATTGAGAAAAAAGTAAAGCCAAACTAGGTAATCATTAAAGACAATTATAATTAAAAATCT
TTTAAAGTTAATTCGAGTATATTTTGCTCATCTATCGCTCTCAAAAGGGAGTTTGTTTTA
GTTTTATAAGTAGGAGTGAATTTATTAGATTAACAATAAACATGCTATATAAAGCATAAT
TTTATAGATTAATAGAAATTTATTAAAATATCTCGTATTTTATAAGAAAATAAAATATTA
TTAAATATTATAATTGCCCTTTAATTACTCTAAAATTATCTCTCACGAGGTTTTTTTATT
CTAAATAATTCGCTTAAATAAGCTAATAAATGTTTCTTTTACTTATTTTTCCTCTTTTCC
AAACCAAACCAAGTATAAAAAATACTCTCAATATTTTGAAGAAACAAATAAAAAAATATG
TTATGCATCCAAAATCTTTATCTTAATAGCAGCAGTAGCTTGCTTTTGAAAATAATAGAT
TTTTATATTTCTAAATAAATAAAAATATTAAATATCACTTATTTGATTATCAATACAAAT
AATACAAGATTTTCAACTTTATTTACAAAATAAAAATGAATTTATTGTTTTTAAAGATAT
TTAATAGGATAGGAATAAACACGTTTATATTAAGAATTTTACTTTTTTTCATAAAGCGCA
GTTCATTTTTAACATAATTTTAAGATAAAATTCAGAATTTAATGATAATAAAACTGATAC
ATAAACATTTAAAACTTAAAAATGAAAATAAATCAAAAATATTATAGCATATTTATTTAA
TTTAATAATTATTTATTTATTTATTTATTTATTTTATCAAAAGCCTAATAATTTATCGAT
TGTTTAGCAACCAAACAAAGAAGATGTCAAAATATTAAATCAGTAATTTATAAGACCAAA
CTAATTGAAGTCAAATCCTTATCCAGTAATGAGAATGGAACCTCCTAAACAAGAATAAAA
TAAGAGCACCTTATATAAGTAATTAAGTGAAGCATATTAGTTGAATCAAATAAATACAAG
ACAAGAACTATTCTTCACCAGAAAGAACAAAATGTTCCCTATGGTTTAAGACATAAAGAG
AATTTCACTTGCCTTCGAAAGTAGAATATAAGATGAAATAACTTTTGCTCTAAATTAATT
ACTCCTCTACTCAGTTAATAGTATGCATCAGTTTACTCTTGAAAGTTATAATCACTTGCT
TGAAGGTATTGTCCAATATCTAGAAGAGATTATCAAGAATGTACCTTCCCTTAATAAAAT
TTTGCAACTTAAAGAAATTAAACCAAGAACTTTGTAAGAATATGGAGGTACTTCAGACTA
TAGCTATTCTGGACCTCCTCCTACAAAAGAGGCATTTAAAGAGCTTTGTATCTTAGACAA
TTATAACTTCCCTATATGTGATATAGTCTTATTTAATTCTTAAAAGAAAAAGGAGGTTTC
TCCTATTGTTTTCTTACGCAAAAGAAAGCGCTATAATGTTGAAAATCTTAAAGAAATGGC
AGGAGAAGTTTATTTGCTTGAACAAACCCGCACAATCTTTTTAATTTTAAGAAATTTTTC
ATTTACTAAATCGAATGAAGTCTACATGGCTAAAAACGAAAGATTATTATAGATAATGAT
TTAGCTATTTATCCTTAATTCAGATTCTTAAATAACAAAATACATATTAGATATCTTGGC
TAATATTTCAAAGCAAATATAACTTATGAATATTCCCGATTACAAGTTATTCTGTGAAAG
GCTCTTTGAATTGCTTAATGCTGATACAAGTGATGAACTTGAGGCTTGTGTTGACATAAT
CCGTAATTTGATTGCCATCTAAGAAAACGAAAGTATTATCGAAAACTTTTTACCAAAATA
CATTGACTAAGTAACTAGACTCATGCTTTAAGCTTAGGGAGATATTAGAGAAGGCATTTT
AGAGTTTCTCTGTTTCCTCAGCGATTTACGTATGGCAACACGTGTTCAATTGGCTCGTCA
TCCTAAATTAATTATGAGAATGGTTGGTCTGCTCTCTTCTGGAGTCATGAAATAAAATCG
CTAACTTCCAAGCCATCTTTAATAACAACAGCACAACTAGCAAGGGGAAGGAGAAAGAAA
TTCAGAAAAAATTACTAAATTAGCAGCCTTAACATTAAGTAATATTTCTCTAGCCCCGTT
ATCTCGTGCATATTTGAAGCCTTTTGAAAGAGATTTATTTGTTGTAGCCTCAACAGATGA
AACAGTAACAAAATATATTTCAAATATTTTGAGTGAACTAATGAACTATGAACCTGAAAG
TGATCCTGAAAGATAATATATGTTTTAATCAATAAACATGGCAAACATATGA


>TTHERM_00243900(protein)
MNESEESKSFKVQLMEYWSSKNMSNIKIPQIGGRELDFFKLYKAVIKRGGAQAVSNNKMW
KEIVNEFGFPSTCTSASFTLRNHYTRFLLGYEQKYFFHKGDEEAMPVLQAGRKRKRKDNQ
DSKQGDSSETGSDSEEAKDQIEKKVKPNQPNNLSIVQQPNKEDVKILNQQFIRPNQLKSN
PYPVMRMEPPKQEQNKSTLYKQLSEAYQLNQINTRQELFFTRKNKMFPMVQDIKRISLAF
ESRIQDEITFALNQLLLYSVNSMHQFTLESYNHLLEGIVQYLEEIIKNVPSLNKILQLKE
IKPRTLQEYGGTSDYSYSGPPPTKEAFKELCILDNYNFPICDIVLFNSQKKKEVSPIVFL
RKRKRYNVENLKEMAGEVYLLEQTRTIFLILRNFSFTKSNEVYMAKNERLLQIMIQLFIL
NSDSQITKYILDILANISKQIQLMNIPDYKLFCERLFELLNADTSDELEACVDIIRNLIA
IQENESIIENFLPKYIDQVTRLMLQAQGDIREGILEFLCFLSDLRMATRVQLARHPKLIM
RMVGLLSSGVMKQNRQLPSHLQQQQHNQQGEGERNSEKITKLAALTLSNISLAPLSRAYL
KPFERDLFVVASTDETVTKYISNILSELMNYEPESDPERQYMFQSINMANI