Identifiers and Description

Gene Model Identifier

TTHERM_00268040

Standard Name

NUP185

Aliases

PreTt09839 | 24.m00270 | 3690.m00084

Description

hypothetical protein; Viral A-type inclusion protein repeat containing protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Biological Process

Domains

  • ( PF00038 ) Intermediate filament protein
  • ( PF00435 ) Spectrin repeat
  • ( PF00904 ) Involucrin repeat
  • ( PF01576 ) Myosin tail
  • ( PF01920 ) Prefoldin subunit
  • ( PF02370 ) M protein repeat
  • ( PF02524 ) KID repeat
  • ( PF04508 ) Viral A-type inclusion protein repeat
  • ( PF04702 ) Vicilin N terminal region
  • ( PF05465 ) Halobacterial gas vesicle protein C
  • ( PF06160 ) septation ring formation regulator EzrA
  • ( PF06401 ) Alpha-2-macroglobulin RAP, C-terminal domain
  • ( PF06696 ) Streptococcal surface antigen repeat
  • ( PF06810 ) phage minor structural protein GP20
  • ( PF07197 ) Protein of unknown function (DUF1409)
  • ( PF07200 ) Modifier of rudimentary (Mod(r)) protein
  • ( PF07334 ) Interferon-induced 35 kDa protein (IFP
  • ( PF07926 ) TPR/MLP1/MLP2-like protein
  • ( PF08614 ) Autophagy protein 16 (ATG16)
  • ( PF08647 ) BRE1 E3 ubiquitin ligase
  • ( PF08946 ) Osmosensory transporter coiled coil
  • ( TIGR00293 ) prefoldin, alpha subunit
  • ( TIGR01280 ) exodeoxyribonuclease VII, small subunit
  • ( TIGR02169 ) chromosome segregation protein SMC
  • ( TIGR02338 ) prefoldin, beta subunit
  • ( TIGR03398 ) phospholipase C accessory protein PlcR

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
WormBase WBGene00022500 0.000000100009565553302
Description: locus:lfi-1 status:Partially_confirmed UniProt:H2L0I3 protein_id:CCD73131.1
Tetrahymena borealis EI9_03526.1 0.00000030014504373857585
Description: hypothetical protein (1656 aa)
Oxytricha Contig11784.0.g11 0.0000004998288985444982
Description: Reovirus sigma C capsid protein
SGD YDR356W 0.000005000363240844623
Description: SPC110 Inner plaque spindle pole body (SPB) component, ortholog of human kendrin; involved in connecting nuclear microtubules to SPB; interacts with Tub4p-complex and calmodulin; phosphorylated by Mps1p in cell cycle-dependent manner
DictyBase DDB_G0290503 0.0002999184360822198
Description: DDB_G0290503 on chromosome: 5 position 4159418 to 4164037

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:28386019: Iwamoto M, Osakada H, Mori C, Fukuda Y, Nagao K, Obuse C, Hiraoka Y, Haraguchi T (2017) Compositionally distinct nuclear pore complexes of functionally distinct dimorphic nuclei in the ciliate Tetrahymena. Journal of cell science 130(10):1822-1834

Sequences 

>TTHERM_00268040(coding)
ATGGATAGCAATTAAGCCGCAGACCAAGAAAAATAAGTTGAAGCATAGAATGAAGAATAA
AAATAAGAATAAGAAAACAATGAATAAAAGGAAAATGAATCTGAATAAGCTTAAACAGAT
CCATAAATCAGCTCAGGAAGTAATTAAAAATTTGATATTGAAATCACAGATGAAGACAAT
GACCCAGAGATTGAAAACAATCAAACTATAGAATAGATGAAATTTAAAGCTTATGACCTA
AAAGCTGAATGTAGGAAATTTAGCAGAAGAACTTAAAGTTAAATTCGCAAATTTGGAAAC
GGATTATGA


>TTHERM_00268040(gene)
ATGGATAGCAATTAAGCCGCAGACCAAGAAAAATAAGTTGAAGCATAGAATGAAGAATAA
AAATAAGAATAAGAAAACAGTAAATTTTTTTTTTTCAAATTCAATTTATAATTGTTAATG
TTTTTAAAAAGCCATTAATATATAATTATCTTAAAAATATTTCTAAATATTTTTTGAATC
CGGCTTCTATTTTTATTGAAACTTATGAACCAAATTAATATTCTGCTTACAATTGAAAAA
AACGAAATAAAGATTTTAGTTTAAAATAAATATTTTATTCAAGTAATAATTTTATTATTT
TATAATTAAGATGAATAAAAGGAAAATGAATCTGAATAAGCTTAAACAGATCCATAAATC
AGCTCAGGAAGTAATTAAAAATTTGATATTGAAATCACAGATGAAGACAATGACCCAGAG
ATTGAAAACAATCAAACTATAGGTAAAATTATTTTAAAAGTATACATAGTATATTAATAT
TGTTATTTTTATTTAAATTTAGAATAGATGAAATTTAAAGCTTATGACCTAAAAGCTGAA
TGTAAATATTGACTTTTAGCTTTTATATATAAACATTTTTTAGTAAAAAAGGTAGGAAAT
TTAGCAGAAGAACTTAAAGTTAAATTCGCAAATTTGGAAACGGATTATGATTAATGTAAA
GATGAAAAAGAAGAATTAGAAAAAAAGTATAAATAAAGTATTGAAAAGTATGGTGAAATG
ATGAAAAATTATGAACATTAGATTATTAGCTTAGAAAACGAAAATAATATAAGAATTCAA
TAATTATAGCAGTAAATAGATGAATTAAAAAAATAGAATGAAGAAAAAGAATAGAGCTAC
TTAAATATGCAATAACAGATAAAATAAGATAAGTAAAGCTTTGATGACATATAAAACAAA
TATGAAGAAATTAATAAACATAATTAAGAATAATTCAAATAAAATAGTGACCAATGGGTA
AAACTAGTCAATCTAACTGAAGAAGTTATTTTCAATTTTTACAATTCTAATTTCTTTACT
GAAAATAAAGACGACATATCAAGTTAAACTCATATAATATTGTAGCATCAATAAACTTTC
CAACAATTAATTGAAAAATATGTGACCTTCTTAGCTGAATAAAAAGAAAAAAATGAAGCT
ATTTCAGATGAAGCTTTTAACAAAATAAAATCTGAAAACGGAAATGGTGTCTAAAAGACT
AACCAAAGAGTATAAGATTTATAACAAAAGTTCGAAGCGTACTAGCAATAATTCAATAAA
TTAAATTCAGAATCATAGGAAAATGAAACTAAACTCCAAGAAACAAAAAAGCAATTAGAA
GATTTGTAAAATGAATTGGGAAACAAAAATAATTAAATATAAGAATTAAATGAATAGCAT
TAAAAATCTTAAACAGAAATCTAAAAATTGAATGAACAAATAACTTCAAATCAATAAAGA
ATAGAAGAGCTTTAGAAAAACGAAAATATCTTAGTTGAGAAAGATAAAAATATAAATGAG
ATCAAAGAATAATTATCAGCTTTAAATCAGCAAATTGAAGGATTCAAGGATATTTAAAAT
AAGTTGGATACTAAAACTGAAGAATTTGAAAAGCTTGAGAAAGATTTTAATTAATAAAAA
AGTGAATTAGAAGAAAAAATAAAATCAAAAGATGAAGAAATAGAGAATCTCAGCAAAAAA
ATTCAAGATATAGTAGAATAATAACAAGAAAAACAAAAATAATTAGATGATTTGAATTCT
AATTTATAAAATTCTAATAAAGAAAATGAATAACTGAAATAAGAAATTAATGATTTTAAA
AATAAAATTAACAATAGTAACTAGGATTAAGAGTAATAATCAAACTAATTAAAAGCAGAA
TTAAAACAAACTTAAGAATAGCTAAATGATTCTTAATAAAAATTTGAATAAGCAGATAAA
GAATTAAAAGATCTCAAATAGCAAATTGAAGATGAAAAAGTTAAATTGAATGATAAGAGT
TAGGAATCAGAGAACTTGAAAGACTAACTCAAATCAGCAAATGAAAAACTAAATGAATCT
CAATAAAAGTTAGAGCAAATTTAAAAAAATTTTGATGATTTGAAGCAAAATAACGATTTA
CAGAAGATAGTTGATGAAAAACAATAAAAATGTGAAGAATTAGAAAGAGAATTGAAAGAG
TTAAAAACTTAACAAGAATAAGTTACAGCTTAAGTCCAATAATTAAATGTAGAGAAAGAA
GAAATTTAAACTAAATTTAACTAGGTCGAACAGGAAAAAGAATAACTTAAAAAGTAAGAG
CAAGAAAAAATTGACTTATTAAGTTAGGCTAAATAAGAAAAAGAAAATAATGAACAAGAA
ATCAATAATTTAAAGTAGACTATTGCAAATTTAGAAAAAGAAAGAACAGATATTTAAATA
CAATCTTAAGAAAAAGATAAATAATTGGATGACGCTAAACATACCTTAGAAAATTTAAAC
AAAGAAATCGAACAATTAAAGAATTAAAATTAGGCAATAGGTGATGTTAATGAGAAAAAT
AAGTAATTAGAAAGCGAAATCACCTAAATTAAAAGCGAAATTGAATAAAAAAATACTGAA
ATTTAAAGTTTAAATAGTAAAAATGAAACTGAGATATCAGAAAAAAAATAATAACTTGAA
GATCATACTAAATAAGTGAATTAGTTAAATGAATAAATTCATCAATTGAGCACTGAGAAT
GAAAACCTTAAAAACGAAATTCAAACTAACTAAAATATATCTTAAACTAAATTAACAGAT
TTAAATTCTGAAATTGAAGGCTTTTAAAAAGAAATAGAAGAGACAAAACTATAGCTAGAT
GATAAAAATACATAGTTAAAAGGTTTACAGGTAAAGCTAGAAGCACTTGAAAAGCAACTT
TTAGAAAAAAATGAAGAAATACAAAAAGTAAATTAATAATTAAAAGAAAGTGAATAAAAG
CACGAAGCCATCTAAAAATAGAATGAAGAATTGTAAAATTCTTTGAAAACACTAGAGGAA
AAAGATTATAATTAGATTCAAAACGATCTAAATTAGTAAGTTTCAGATTTAAAATAAAAA
GAGTAGGATTTAAATAAATAATTAGATTAAAAGTTGCAAGAAATCAATTAGATTAAATAA
TAATTATCAAATGAAACATCAGATTTCATGAAAAAGAATGTATAACTTTAATAGACAATT
TAGTAGCTAAATCAAACAATTTCATAATATCAAGAACAAATAGAGAGAATAAAAACCGAT
TTATATTAAAGCTAATAAGAAAAAAGCTAACTTTAAAGTAAATTAAATGAGGCAAACAGA
GAAATTTAAAATAAAGAAGATGATTTAAATAAAAAAGTAGAAATAATAGCTGAGCTTGAA
CAAAATAACAAAGATTTAAAAATAAATCTTCACAACTATGAAGTAAAGAGTTATGATTTA
GATAAAGAGAGATTTGATGTGTTAGAAATATAGATATAACATAATAAAGAATAGTAAGTT
TAGTATAAACAAGCAGAAGAAAAAATTTAAAAACTAGAAGAAGAAATAAAAAAGTTACTT
GCTGACAAAACAGATTCATTGGAAAAACTCTAGAAGGAAATTAAAACTGAATAAGTGATT
GGAGAAGAGATGTCTAAGAAATTCAGATCAAATTTAGCAGAGTTATAAATCAATAACGAA
TAAAATAGCTTGGAAAATTCTCAAAAAACTATAAATCAATTAGCAGAAGTAGTATTGAGA
AAAGTAAAAGACTGTTTCTATTCCAGCACTAAAATTGTTTAAATTTCTCGTCTCTTTTAT
GATGGATCTGATGGACGTAATGCTTCACAAGATAATGCCCTTTCTTTAATCCAAGAACTT
AATGAAGCCTAACACGCATCTATCACAATTCACAAGCTTTTAGGTTTCGAGTATAAGAAA
TTCAAGAATATTTTACCAATTTAATATTTAAGAAACGACTTTAAGGTTATAAATCAAACA
GAAAATACAACTTAGCCACTTTACGTTAATGAAAATGATCAAGTTGCTTAATATGCAATA
GTAAATTATGAAATCTAAAATAACAAATTTTATGTTGGATTGATTTAATTTGATGTTGTT
AGCACTTACTTTAGAGTTGGTTTTGTCCCTGTTAATCCTTAAACCAAATAAGAGTAGTGG
GGTGAAGCTATTTATGCTAACTTCTGTCTAAATCATGAAGCTGCTAACTCAAAAAATTAT
AGAAATCTTGTGAGAATCAATCATTTCAATCCTATCTTTAGCATTAAAAAGGGCTATATC
TATATTCGTTTTAATATCTAGAAGAACATTTTCTAATTCTGTGACACAAATTATCAATTG
AGCGAATTATCCAAATGCTAATTTAAAAGTGATTTACATTACAAACTCTTCATCGGCATG
AAAGAAACTAAGGGACATTTCTAAATAGTTGATTTGAAGGAATAAAGTAGAGATGAAGAT
ATTAATATTATGACTCAAATATTCTCTAATGAACAGCCATAATTCGAAGATTTGATTAGA
CTTTTTATTTGA


>TTHERM_00268040(protein)
MDSNQAADQEKQVEAQNEEQKQEQENNEQKENESEQAQTDPQISSGSNQKFDIEITDEDN
DPEIENNQTIEQMKFKAYDLKAECRKFSRRTQSQIRKFGNGL