Identifiers and Description

Gene Model Identifier

TTHERM_00348880

Standard Name

RRM11 (RNA Recognition Motif-containing protein 11)

Aliases

PreTt05300 | 36.m00264 | 3703.m00126

Description

RRM11 RNA recognition motif protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( TIGR01622 ) splicing factor, CC1-like family
  • ( TIGR01628 ) polyadenylate binding protein, human types
  • ( TIGR01642 ) U2 snRNP auxilliary factor, large
  • ( TIGR01659 ) sex-lethal family splicing factor
  • ( TIGR01661 ) ELAV/HuD family splicing factor

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_09792.1 9.997093137033517e-262
Description: hypothetical protein (479 aa)
WormBase WBGene00003902 1.000116773704384e-19
Description: locus:pab-1 status:Confirmed UniProt:Q9U302 protein_id:CAA21572.1
Oxytricha Contig18677.0.g10 2.000769134519826e-18
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
DictyBase DDB_G0291486 5.998633383648922e-18
Description: DDB_G0291486 on chromosome: 6 position 413873 to 415521
SGD YER165W 0.000000000000008002679274403579
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
Stentor Coeruleus SteCoe_14690 0.00000000003775134544279098
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00348880(coding)
ATGAATATAAATTGTCAGTAGTAAGAAGAAAGTTCTTTCGAAATAGATTATAGATTTTAG
AATGATTTGATTTCATTTGAAAATCTCATATCGAATTTCAACTAAAGTAAGCAAACTAAA
GACAACATTGAAGTAGATTTTGATAGCTTGCAAGAGCAGACTAATTAGCTTATGCTACTT
CTACAAAAATCAGCTAATAACAATAAATCAATTCAAAATAAATAAAATGATGAGTTAACT
AATTTTGTAATAGATATTTAGATGGTTTTTAATTCAATTCCTATTAAATTATTTATTGGG
CAAGTTCCTAAGGATTGGTAGGAAAGTGATCTTAAGATTTTTTTTGAAAAACATACCAGT
ATCACATAAATTGAAGTAATAAGAGACTAAAAATTTAGACATTAGGGATGCGCTTTTGCT
ACTTTTTCCTCAATGTCTGAAGCAGAAAAAGTTATTGAATTCTACAAAAATAAACATTTT
CCAAACAGTAAGTAGGAAATTATTATGAAGTGGGCTTCTGGAGAAGAAGAAAGACTCGGA
GTCAGCGAGAATTCAAGTCATAAGCTAATTATAAAAAATCTTCCTGCTTTAATATCAGAT
GCAAGTATTTCTAATATATTTGATAATTTTGGTAGAATCTAATAATTAAAAGTCATACGA
GATAAAAAAACAAGTGAATGCAAAGGTCATGCGTTTATTAAATATTATGAGAAAGAGAGT
GCCCATTTAGCTGTCTAGAACTTGAACAAATAAAATATTTACCTAATTTAAAATAAAAAA
TTGAAAGTTTCTTTTATAGAAAAGAGTTATTAAAAAAAGCAAAAGTAAATTCTAAAATAT
ATGAAACAAAATACAAATCAAATAACATAAAATGGCCCTCTGCCTTCTACAATACCTTTT
GAGAAGTATTATTATGAATATTTTAATTAAGGGGAATCTAATCCTATATTTTACCATCCA
TTTACAGATACTTCTTCTACTGAAACTCCTCCTTACTCCTCATTAATCTGGCACGAAGAT
GGTTCTTGCACAATTACACCTAAACTTTTTCCCTGCCATATAGATTTTACAATGTAAAAT
AAAAGAAAAGATGGTATTAAAAAATATACAAATCAAAAATATGTTGTTTAAGGTCCTTCA
CACTCTAATATTTTTGTCTTTCATCTACCTAAATAATATAATGAAAAAAACTTATTTGAG
CTATTTTCAGGTTATGGAAATATCATTTCAATAACTATTTGTAGAAAATAAAATGGTGAA
AGCCGAGGTTATGGATTTGTTAGTTTTAACTAGCCTTATGAGGCAGCTCATGCAATAAAA
GAATTAAATGGTTTAAATTTGATGGGAAAAAGAATAAAAGTAGAACTAAAATAAACCCAT
ATTGAAAAAGTAAATAGCAATCAAAAAACACTAAACTATGAATGA


>TTHERM_00348880(gene)
ATGAATATAAATTGTCAGTAGTAAGAAGAAAGTTCTTTCGAAATAGATTATAGATTTTAG
AATGATTTGATTTCATTTGAAAATCTCATATCGAATTTCAACTAAAGTAAGCAAACTAAA
GACAACATTGAAGTAGATTTTGATAGCTTGCAAGAGCAGACTAATTAGCTTATGCTACTT
CTACAAAAATCAGCTAATAACAATAAATCAATTCAAAATAAATAAAATGATGAGTTAACT
AATTTTGTAATAGATATTTAGATGGTTTTTAATTCAATTCCTATTAAATTATTTATTGGG
CAAGTTCCTAAGGATTGGTAGGAAAGTGATCTTAAGATTTTTTTTGAAAAACATACCAGT
ATCACATAAATTGAAGTAATAAGAGACTAAAAATTTAGACATTAGGGATGCGCTTTTGCT
ACTTTTTCCTCAATGTCTGAAGCAGAAAAAGTTATTGAATTCTACAAAAATAAACATTTT
CCAAACAGTAAGTAGGAAATTATTATGAAGTGGGCTTCTGGAGAAGAAGAAAGACTCGGA
GTCAGCGAGAATTCAAGTCATAAGCTAATTATAAAAAATCTTCCTGCTTTAATATCAGAT
GCAAGTATTTCTAATATATTTGATAATTTTGGTAGAATCTAATAATTAAAAGTCATACGA
GATAAAAAAACAAGTGAATGCAAAGGTCATGCGTTTATTAAATATTATGAGAAAGAGAGT
GCCCATTTAGCTGTCTAGAACTTGAACAAATAAAATATTTACCTAATTTAAAATAAAAAA
TTGAAAGTTTCTTTTATAGAAAAGAGTTATTAAAAAAAGCAAAAGTAAATTCTAAAATAT
ATGAAACAAAATACAAATCAAATAACATAAAATGGCCCTCTGCCTTCTACAATACCTTTT
GAGAAGTATTATTATGAATATTTTAATTAAGGGGAATCTAATCCTATATTTTACCATCCA
TTTACAGATACTTCTTCTACTGAAACTCCTCCTTACTCCTCATTAATCTGGCACGAAGAT
GGTTCTTGCACAATTACACCTAAACTTTTTCCCTGCCATATAGATTTTACAATGTAAAAT
AAAAGAAAAGATGGTATTAAAAAATATACAAATCAAAAATATGTTGTTTAAGGTCCTTCA
CACTCTAATATTTTTGTCTTTCATCTACCTAAATAATATAATGAAAAAAACTTATTTGAG
CTATTTTCAGGTTATGGAAATATCATTTCAATAACTATTTGTAGAAAATAAAATGGTGAA
AGCCGAGGTTATGGATTTGTTAGTTTTAACTAGCCTTATGAGGCAGCTCATGCAATAAAA
GAATTAAATGGTTTAAATTTGATGGGAAAAAGAATAAAAGTAGAACTAAAATAAACCCAT
ATTGAAAAAGTAAATAGCAATCAAAAAACACTAAACTATGAATGA


>TTHERM_00348880(protein)
MNINCQQQEESSFEIDYRFQNDLISFENLISNFNQSKQTKDNIEVDFDSLQEQTNQLMLL
LQKSANNNKSIQNKQNDELTNFVIDIQMVFNSIPIKLFIGQVPKDWQESDLKIFFEKHTS
ITQIEVIRDQKFRHQGCAFATFSSMSEAEKVIEFYKNKHFPNSKQEIIMKWASGEEERLG
VSENSSHKLIIKNLPALISDASISNIFDNFGRIQQLKVIRDKKTSECKGHAFIKYYEKES
AHLAVQNLNKQNIYLIQNKKLKVSFIEKSYQKKQKQILKYMKQNTNQITQNGPLPSTIPF
EKYYYEYFNQGESNPIFYHPFTDTSSTETPPYSSLIWHEDGSCTITPKLFPCHIDFTMQN
KRKDGIKKYTNQKYVVQGPSHSNIFVFHLPKQYNEKNLFELFSGYGNIISITICRKQNGE
SRGYGFVSFNQPYEAAHAIKELNGLNLMGKRIKVELKQTHIEKVNSNQKTLNYE