Identifiers and Description

Gene Model Identifier

TTHERM_00421200

Standard Name

REX1 (RNA exonuclease REX1)

Aliases

PreTt07244 | 46.m00299 | 3679.m00149 | RNH70

Description

REX1 exonuclease

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• 3'-5' exonuclease activity (IEA) | GO:0008408
• nucleic acid binding (IEA) | GO:0003676

Biological Process

• nucleobase-containing compound metabolic process (IEA) | GO:0006139

Domains

• ( PF00929 ) exonuclease
• ( PF01372 ) Melittin
• ( PF01612 ) 3'-5' exonuclease
• ( TIGR00073 ) hydrogenase accessory protein HypB

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10952.1	9.997093137033517e-262
	Description: exonuclease (584 aa)
SGD	YGR276C	1.9994920269952867e-34
	Description: RNH70 3-5 exoribonuclease; required for maturation of 3 ends of 5S rRNA and tRNA-Arg3 from dicistronic transcripts
DictyBase	DDB_G0291590	9.99723014177113e-33
	Description: rexo1 on chromosome: 6 position 580025 to 582109
WormBase	WBGene00015462	2.0008113830639685e-30
	Description: status:Confirmed UniProt:O16312 protein_id:CCD63091.1
Oxytricha	Contig22416.0.g98	2.000769134519826e-18
	Description: Exonuclease
Stentor Coeruleus	SteCoe_36101	0.0000000000006914400106940203
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00421200(coding)
ATGGAAAAACCAAGCTAATAAGGAACATATGTTTCAATATTCTAGTAACTACAAAGCTAA
AAAAGCTAGACAACAGGAAGCTCATCAATATTTAGTGGCTTAATGAAAACATAGTCTAGT
GATATTATATAAACATCTTCATAAAAGTCTAGCAAAAAAAATAAAAAACCTAACTTATAA
GATTTAGAATAAAGCTCAACTACTCTGAAAAAGATACAAACTAGTTAAGATCAGGCACCA
AAAGATGAATGTGAAATATCTTAGGAATCAATCAATAATAAATAAACAAGCAAATAGGAG
ATAAAAAATAAAATTGAAATAGTTGATCATGCTAAACCCCGCAAATAAACATCAACAAGA
GTATTTTAAAGTTTACTGTAATGGTTATTTACTAAATAAGGAATAAATCCACTTTGGATT
ATGATAGAAGATAGACACCTAATTTAGAATTTTGTATATATTACATTAACTGTACCTCCT
GATTTTGAAAAGCGCTTGTTAGCTAAATAGGATTTTCCTTTTTTAGGTTAATATTATGAT
TAGAAAAATATTGCAGTTTTTAAAGAAAGAACAGTTCAAAATGAAGATAATTATTGGCAT
TCCCTATTCTAAACAAAGTTAACAGAAGATATTTCTCTTCCACTCTTTAACAAAAATACA
GTCTCTCCCTAATAATAAATAAACTAAGAGTAGTATTAAGCAATGACTTATGAAGAAAAA
CTATATTATAAATATTCATAATTTTGTCATTCTAAATAGACTCTTAAGAATAATTTGTAT
CCTACTGAGAGTGAAGACTTTCCTAATTATGTTAGCTCAACTGAGAGTACATTAAAATTT
GACACAGTTAAATTTGAAAACAAAATTCTTGGATTAGATTGTGAAATGGTTTCAACTGAG
TATGGTTTAGAGCTTGCAAGAATAAGTTTAGTTAATTTCGATGGTGAAGTTTTGATAGAC
TAACTGGTAAAAACGCCAAATAGGATTATAAATTATAACACTTAATATAGTGGAATAACA
TAAGAAATGTTAAAAGATGTAAAAGTAGATTTACAGTAAGCACAGAAACTACTATTTTAG
TATGTTTGCTAAGACACCATTCTCATAGGACATTCTTTAGAGAATGATTTAGTAGCTATG
CAAGTAATTCATAACAAGGTTATAGACACAAGTATATTATTTTTGACAAAGAATGAAAGA
AAGCTAAAATTAAAGGATTTGGCCTAAAAATTTTTGAATTGCAAAATTTAGTAAGGTTCT
CACTGTCCTTCAGAAGATGCAAAAAGTGCATTAAGCTTAGCAAAATTGAGAATTGAAATA
TTAGAAAAGTTTGATAATTCTAAAATAATAAGTGGAACCAGCTAAATTACACTAGATTTA
CTCGATTAAATTATAAAAACAAATAACACTATTTTAATCTTAGACGAAACTGACTAATTA
ATGAGGTTACTTTAATATGGAGTACATTATGATGAGTTAAAGCAAAATAGTAACGAATAA
AGATTAGATAAAATTGTTAAATGGGTGAAGAAGAAAAAGAAAGAAAATTGCATCATTCCA
AGAATAATAATGACATAATTAATAAAAGAGAAAAAATAAATGAGCTATAAAGACTTAGAT
AGTAAATTCAAAGAAATAGTAGATAACTCTCCTTAAAATTCAGTATTTGCTTTCAATTTT
GAAATAGAAGATGATAAATCTTTAAACAACAGTTTAAATGTATCTAACCCATTTTGCATA
TTTGTGTCCATTTGA

>TTHERM_00421200(gene)
ATGGAAAAACCAAGCTAATAAGGAACATATGTTTCAATATTCTAGTAACTACAAAGCTAA
AAAAGCTAGACAACAGGAAGCTCATCAATATTTAGTGGCTTAATGAAAACATAGTCTAGT
GATATTATATAAACATCTTCATAAAAGTCTAGCAAAAAAAATAAAAAACCTAACTTATAA
GATTTAGGTAGAAATAAGTTAAAAATATAACGAAATTAATATATCTTTTTAAAATATATA
AGAATAAAGCTCAACTACTCTGAAAAAGATACAAACTAGTTAAGATCAGGCACCAAAAGA
TGAATGTGAAATATCTTAGGAATCAATCAATAATAAATAAACAAGCAAATAGGAGATAAA
AAATAAAATTGAAATAGTTGATCATGCTAAACCCCGCAAATAAACATCAACAAGAGTATT
TTAAAGTTTACTGTAATGGTTATTTACTAAATAAGGAATAAATCCACTTTGGATTATGAT
AGAAGTAAATCATATTCGAGAGTTAATTTTTATTTACTTATTAATTCTTAATATCTAAAG
GATAGACACCTAATTTAGAATTTTGTATATATTACATTAACTGTACCTCCTGATTTTGAA
AAGCGCTTGTTAGCTAAATAGGATTTTCCTTTTTTAGGTTAATATTATGATTAGAAAAAT
ATTGCAGTTTTTAAAGAAAGAACAGTTCAAAATGAAGATAATTATTGGCATTCCCTATTC
TAAACAAAGTTAACAGAAGATATTTCTCTTCCACTCTTTAACAAAAATACAGTCTCTCCC
TAATAATAAATAAACTAAGAGTAGTATTAAGCAATGACTTATGAAGAAAAACTATATTAT
AAATATTCATAATTTTGTCATTCTAAATAGACTCTTAAGAATAATTTGTATCCTACTGAG
AGTGAAGACTTTCCTAATTATGTTAGCTCAACTGAGAGTACATTAAAATTTGACACAGTT
AAATTTGAAAACAAAATTCTTGGATTAGATTGTGAAATGGTATTCGAAAATTATTATTAA
TAATAAATAAATAAATATTAAAGTGGGTTAATTAAATATTAGGTTTCAACTGAGTATGGT
TTAGAGCTTGCAAGAATAAGTTTAGTTAATTTCGATGGTGAAGTTTTGATAGACTAACTG
GTAAAAACGCCAAATAGGATTATAAATTATAACACTTAATATAGTGGAATAACATAAGAA
ATGTTAAAAGATGTAAAAGTAGATTTACAGTAAGCACAGAAACTACTATTTTAGTATGTT
TGCTAAGACACCATTCTCATAGGACATTCTTTAGAGAATGATTTAGTAGCTATGCAAGTA
TTTATTTAGTTATTTTTTAGGTCATAATTATATATAAATAATCTCATGAAAAAATTAAAG
GTAATTCATAACAAGGTTATAGACACAAGTATATTATTTTTGACAAAGAATGAAAGAAAG
CTAAAATTAAAGGATTTGGCCTAAAAATTTTTGAATTGCAAAATTTAGTAAGGTTCTCAC
TGTCCTTCAGAAGATGCAAAAAGTGCATTAAGCTTAGCAAAATTGAGAATTGAAATATTA
GAAAAGTTTGATAATTCTAAAATAATAAGTGGAACCAGCTAAATTACACTAGATTTACTC
GATTAAATTATAAAAACAAATAACACTATTTTAATCTTAGACGAAACTGACTAATTAATG
AGGTTACTTTAATATGGAGTACATTATGATGAGTTAAAGCAAAATAGTAACGAATAAAGT
ATTTTACACTAATTAATTAATGATATAAGCTAAATAAAATTTTATTTTAAATTAGGATTA
GATAAAATTGTTAAATGGGTGAAGAAGAAAAAGAAAGAAAATTGCATCATTCCAAGAATA
ATAATGACATAATTAATAAAAGAGAAAAAATAAATGAGCTATAAAGACTTAGATAGTAAA
TTCAAAGAAATAGTAGATAACTCTCCTTAAAATTCAGGTATATAAATCCATATCTGATTC
ATTCATTAAATCTTAATTTTATTCTAAAAAATAGTATTTGCTTTCAATTTTGAAATAGAA
GATGATAAATCTTTAAACAACAGTTTAAATGTATCTAACCCATTTTGCATATTTGTGTCC
ATTTGA

>TTHERM_00421200(protein)
MEKPSQQGTYVSIFQQLQSQKSQTTGSSSIFSGLMKTQSSDIIQTSSQKSSKKNKKPNLQ
DLEQSSTTLKKIQTSQDQAPKDECEISQESINNKQTSKQEIKNKIEIVDHAKPRKQTSTR
VFQSLLQWLFTKQGINPLWIMIEDRHLIQNFVYITLTVPPDFEKRLLAKQDFPFLGQYYD
QKNIAVFKERTVQNEDNYWHSLFQTKLTEDISLPLFNKNTVSPQQQINQEQYQAMTYEEK
LYYKYSQFCHSKQTLKNNLYPTESEDFPNYVSSTESTLKFDTVKFENKILGLDCEMVSTE
YGLELARISLVNFDGEVLIDQLVKTPNRIINYNTQYSGITQEMLKDVKVDLQQAQKLLFQ
YVCQDTILIGHSLENDLVAMQVIHNKVIDTSILFLTKNERKLKLKDLAQKFLNCKIQQGS
HCPSEDAKSALSLAKLRIEILEKFDNSKIISGTSQITLDLLDQIIKTNNTILILDETDQL
MRLLQYGVHYDELKQNSNEQRLDKIVKWVKKKKKENCIIPRIIMTQLIKEKKQMSYKDLD
SKFKEIVDNSPQNSVFAFNFEIEDDKSLNNSLNVSNPFCIFVSI