Identifiers and Description

Gene Model Identifier

TTHERM_00467760

Standard Name

RAB6A

Aliases

PreTt18678 | 55.m00233 | 3710.m00082

Description

RAB6A Rab-family small GTPase; Rab VI family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

  • ferric-hydroxamate transmembrane transporter activity (IEA) | GO:0015622
  • glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity (IEA) | GO:0008886
  • rhamnulokinase activity (IEA) | GO:0008993

Domains

  • ( PF00025 ) ADP-ribosylation factor family
  • ( PF00071 ) Ras family
  • ( PF01926 ) GTPase of unknown function
  • ( PF03029 ) Conserved hypothetical ATP binding protein
  • ( PF08477 ) Miro-like protein
  • ( TIGR00157 ) ribosome small subunit-dependent GTPase A
  • ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_15717.1 2.000893364583308e-148
Description: Ras family protein (229 aa)
DictyBase DDB_G0268068 5.9988196117913e-83
Description: rab6 on chromosome: 1 position 1398472 to 1399280
WormBase WBGene00004270 3.0005855096961235e-80
Description: locus:rab-6.2 Ras-related protein Rab-6.2 status:Confirmed UniProt:Q22782 protein_id:CCD74453.1
Oxytricha Contig5831.0.g6 9.99711830094262e-74
Description: Ras family
SGD YLR262C 9.004385969422137e-73
Description: YPT6 Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6
Stentor Coeruleus SteCoe_6177 1.8048513878454153e-35
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences 

>TTHERM_00467760(coding)
ATGAACTCAGAAACAAAAGGATCAATAGCTACTCCCTTGTCAAAATATAAATTAGTATTT
TTAGGAGATTAGGGTGTAGGAAAGACATCAATTATTAACAGATTTATGTTTGACACATTT
GATGGAAAAGATCACCCTACAGTTGGTATTGATTTTATCTCCAAGACCCTCTATTATGAA
GATAGAACTATAAGATTACAACTATGGGATACAGCTGGATAAGAAAGATTTAGAAGTTTA
ATTCCTTCATATATTAGAGATAGCGCTGTTGCAGTTGTCTGTTACGATATTACAAACAAA
GTTTCATTCGATAATGTTGCCAAATGGATAGAAGATGTTAGGGCAGAAAGAGGACACGAT
GTCATTATTTGCTTAGTTGGTAGTAAAAATGATTTAGTTGACAAAAGGGTAGTATAAACA
ACAGATGGTTAAGTTAAAGCAAAAGAATTAGATGTCAAATTTTTTGAAGTTAGTGCTCTC
ACTGGTTAAAATGTATAATAACTATTTAGATCTATTGCTAATATGCTTCCAGGAGCAGAA
GTTAGCTAGCTTGCTCAGCTTTAAGGAGGAATGAACAAAAACGTAAATAATAACTAAGAA
GAAACAAAATAAAATTTTCAACTGGACTAAAACCAAACAGAAGAGCAAAATAAAGAAAAA
AAAGAAAAAAAATAAGGCGGCTGCTGTTGA


>TTHERM_00467760(gene)
ATGAACTCAGAAACAAAAGGATCAATAGCTACTCCCTTGTCAAAATATAAATTAGTATTT
TTAGGAGATTAGGGTGTAGGAAAGACATCAATTATTAACAGATTTATGTTTGACACATTT
GATGGAAAAGATCACGTAAATAATTCTTCTTCTTCTTTAAATGCTCTATAAAACCAATCC
ATAATTTGTAAATAAAAATGATCAACTGTTTTTAAAAATTTAAATAAAAACACAACTACA
TTAATGAAATATATTAAAGAGAATTAAGGAGAAATAGATTTAAAAATATAAATCATTAAA
TTATCTAAAAATAATTTGTTATTATATATTTGGGATTCGCTTAAATCTAGCTCATTTTAA
CTCCTTAATGAAATTATTTATTATAAATCATAAATATAAAAAAACAATCATCATATATAA
AGAATATTTAAATCTAAGAGTATATTTATTATAGCCACTTGAAACTTAGAATTATGGATT
AACTTTAAATAAAATTGAATATCTGAGTTAAATTAAAATAATTATTTTTAATATTAGCCT
ACAGTTGGTATTGATTTTATCTCCAAGACCCTCTATTATGAAGATAGAACTATAAGATTA
CAACTATGGGATACAGCTGGATAAGAAAGATTTAGAAGTTTAATTCCTTCATATATTAGA
GATAGCGCTGTTGCAGTTGTCTGTTACGATATTACAAGTAATTAGATAGCCTCATTCGAT
TTATATTAATATTTATTTTTCCTCCGACTAAAATAGACAAAGTTTCATTCGATAATGTTG
CCAAATGGATAGAAGATGTTAGGGCAGAAAGAGGACACGATGTCATTATTTGCTTAGTTG
GTAGTAAAAATGATTTAGTTGACAAAAGGTAAATATTATTAATTAAAAGTCATTCTTTAA
ACTCAATATGCTTTTTTGATTCAACTATTTAGGGTAGTATAAACAACAGATGGTTAAGTT
AAAGCAAAAGAATTAGATGTCAAATTTTTTGAAGTTAGTGCTCTCACTGGTTAAAATGTA
TAATAACTATTTAGATCTATTGCTAATATGCTTCCAGGAGCAGAAGTTAGCTAGCTTGCT
CAGCTTTAAGGAGGAATGAACAAAAACGTAAATAATAACTAAGGTATTTTATTTTAAAAG
AAAATTAACAAATAAATAAATAAACGAACAAAGTATATTTAAAAATATTAATTTTTATTT
TAATATCTAATAAACAGAAGAAACAAAATAAAATTTTCAACTGGACTAAAACCAAACAGA
AGAGCAAAATAAAGAAAAAAAAGAAAAAAAATAAGGCGGCTGCTGTTGA


>TTHERM_00467760(protein)
MNSETKGSIATPLSKYKLVFLGDQGVGKTSIINRFMFDTFDGKDHPTVGIDFISKTLYYE
DRTIRLQLWDTAGQERFRSLIPSYIRDSAVAVVCYDITNKVSFDNVAKWIEDVRAERGHD
VIICLVGSKNDLVDKRVVQTTDGQVKAKELDVKFFEVSALTGQNVQQLFRSIANMLPGAE
VSQLAQLQGGMNKNVNNNQEETKQNFQLDQNQTEEQNKEKKEKKQGGCC