Identifiers and Description

Gene Model Identifier

TTHERM_00551090

Standard Name

RPT6 (26S proteasome regulatory subunit T6)

Aliases

PreTt29213 | 72.m00136

Description

RPT6 26S proteasome ATPase regulatory subunit 6

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Cellular Component

• Fanconi anaemia nuclear complex (IEA) | GO:0043240

Molecular Function

• glutathionylspermidine synthase activity (IEA) | GO:0008885

Biological Process

• pyrimidine ribonucleotide biosynthetic process (ISS) | GO:0009220 | Ref:21637855

Domains

• ( PF00004 ) ATPase, AAA family
• ( PF00005 ) ABC transporter, ATP-binding protein
• ( PF00158 ) Sigma-54 interaction domain
• ( PF01202 ) shikimate kinase
• ( PF01926 ) GTPase of unknown function
• ( PF07724 ) ATPase family associated with various
• ( PF07726 ) ATPase family associated with various
• ( PF07728 ) ATPase family associated with various
• ( TIGR00635 ) Holliday junction DNA helicase RuvB
• ( TIGR00678 ) DNA polymerase III, delta' subunit
• ( TIGR01241 ) ATP-dependent metallopeptidase HflB
• ( TIGR01242 ) 26S proteasome subunit P45 family
• ( TIGR02237 ) DNA repair and recombination protein
• ( TIGR02880 ) CbbX protein
• ( TIGR02881 ) stage V sporulation protein K
• ( TIGR02928 ) orc1/cdc6 family replication initiation protein

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_21548	0
	Description: None
WormBase	WBGene00004506	9.997093137033517e-262
	Description: locus:rpt-6 status:Confirmed UniProt:Q9XTT9 protein_id:CAB11558.1
Tetrahymena borealis	EI9_07336.1	9.997093137033517e-262
	Description: 26S proteasome subunit P45 family protein (396 aa)
DictyBase	DDB_G0292382	9.997093137033517e-262
	Description: psmC5 on chromosome: 6 position 1673522 to 1674865
Oxytricha	Contig1022.1.g101	9.997093137033517e-262
	Description: ATPase family associated with various cellular activities (AAA)
SGD	YGL048C	9.997093137033517e-262
	Description: RPT6 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences

>TTHERM_00551090(coding)
ATGTCAGTAAGTTAAGGTGCAGGATTGAAGGCATTTTATCTTTCTAAGATTGAAGAGCTC
TCTTTGAAAGTTAATGAAAAGTCATAGAATATAAAACGTTTGGAGGCTTAAAGAAACGAA
TATAATAATCAAGTTCGTATGCTCAAAGAAGAATTTTACTCTTTATAATCACCTCACTCT
TATGTTGGTGAAGTTGTTAAGCCAATGGGAAAGAGCAAAGTTTTAGTTAAGATATCTCCT
GATGGCAAATATGTAGTTAATATAGATAAAAGCATTAAAATTGAAGATTGTTTACCAAAT
ACTCGTGTTGCTTTAAAAGGTGACTCTTATGTTCTTCACAAGCTTCTTCCCACTAAGGTT
GATCCTTTGGTTTCTCTCATGAAAGTCGAAAAGGTACCCGATTCTACTTATGATATGATC
GGTGGTCTTGATCAATAAGTTAAGGAAGTAAAGGAAGTTATTGAATTGCCAATTAAGCAT
CCTGAAATTTTTGAGTCTCTTGGTATTGCTTAACCTAAGGGTGTTCTCCTTTACGGACCT
CCTGGTACTGGTAAAACCCTTCTCGCCAGAGCTATTGCACATCATACAGATTGTACTTTT
ATTAGAGTTTCTGGTAGTGAATTGGTTTAGAAATATATTGGTGAAGGAGCAAGAATGGTC
AGAGAATTATTCGTCATGGCTAGATAACATGCTCCTTGTTTGATTTTTATTGATGAAGTC
GATTCTATCGGTGGTGCAAGAATTGATAGTGATAGAGGTGGTGACTCAGAAGTACAAAGA
ACTATGCTTGAACTTCTTAACTAACTTGACGGTTTTGAATCTACAAATAACATTAAAATT
ATCATGGCTACTAATCGTATTGATATATTAGATCCTGCTCTTCTTAGACCAGGTCGTATC
GATAGAAAGGTAGAGTTCCCTAATCCTAGTGTTGAGGCTAGATTAGAAATCTTATCAATC
CACTCAAAGAAAATGAATCTCATGAGAGGTATTAATTTAAAGGCTATAGCTGAAAAGATG
GGAGGAGCTTCTGGTGCAGAATCAAAGGCTGTATGTACTGAAGCTGGTATGTTTGCATTA
AGAGAAAGAAGAATTCATGTTACTCAAGAAGATTTCGAAATGGCTGTTTCAAAGGTTATG
AAAAAGGACTTAGAAAAAAATATGGCTCTTCGTAAATTATGGACATGA

>TTHERM_00551090(gene)
ATGTCAGTAAGTTAAGGTGCAGGATTGAAGGCATTTTATCTTTCTAAGATTGAAGAGCTC
TCTTTGAAAGTTAATGAAAAGTCATAGAATATAAAACGTTTGGAGGCTTAAAGAAACGAA
TATAATAATCAAGGTATATCATTAAGCGTTGATTTATTTAGTAGATTATAGATAAGAGCA
AAAATTTTCATAAAATAATCAAAAAGCTGGCTAATTACAGCAGTAAAAAAAGGCACAAGC
ACAAAATGCATAAAGCTTTTCTTAATTTGATTAATAAAATAATCTTGCCAATTTTTCATC
AAATAATTACAAATCTATTTTTAAAATGTTTAAAAGACAACAATATTTAATAAATAATTA
ACTTGAGATGAAAACAAAAATGCTTGATTTGTTTTGTAGTGATTGAATTTACCTTTACTA
CACTCAATAAATTGTTTGATTAATTTAAAATATCACAGCTTTTAAAATTATTTCTAAAAA
TTTTGTTTAACTTATAATAAATAAATAGTTCGTATGCTCAAAGAAGAATTTTACTCTTTA
TAATCACCTCACTCTTATGTTGGTGAAGTTGTTAAGCCAATGGGAAAGAGCAAAGTTTTA
GTTAAGGTAGAATATACAATTAAATACAATATTTTATTTTAGACAAAATAAAATATATAT
TAAATTTTTACTTTTGGTTTATGCAATATAAAAATAATAAATTCTTAAATGATTAGATAT
CTCCTGATGGCAAATATGTAGTTAATATAGATAAAAGCATTAAAATTGAAGATTGTTTAC
CAAATACTCGTGTTGCTTTAAAAGGTGACTCTTATGTTCTTCACAAGCTTCTTCCCACTA
AGGTTGATCCTTTGGTTTCTCTCATGAAAGTCGAAAAGGTACCCGATTCTACTTATGATA
TGATCGGTGGTCTTGATCAATAAGTTAAGGAAGTAAAGGAAGTTATTGAATTGCCAATTA
AGCATCCTGAAATTTTTGAGTCTCTTGGTATTGCTTAACCTAAGGGTGTTCTCCTTTACG
GACCTCCTGGTACTGGTAAAACCCTTCTCGCCAGAGCTATTGCACATCATACAGTAAATA
ATTATATTAGAAAATAAACAGTTGGAACCCTCCTATATTTATCACCAATATTTTATTTAA
AAATTTAAATAAATTAGAAGAAAAACGAACTAAAAAATAAATATTAATGTAAAAAAGCTC
TAGGTTTTTCTGAAATAAAATATTTTTAAAATAAATTTTAGAATTTTTGTTAAATTTATT
AGGGATTTAATTAAATTTTATAATTATGAGTTTATAAAAAGTATTTAGTAATAAAAATAG
AAAAAGAGCTAAAGAAAATTTTAAGAATTTAACTTGAAAATATAGTTTTACGAAATCAAT
TGAGATTTAAACAGTCAAAAAAAATAATAAATAATTTTTATTTCCAGAAAAAATTAATTG
TCTTATTATTTTAACTTAGCTAATTTATTTTTATTGAATAGGATTGTACTTTTATTAGAG
TTTCTGGTAGTGAATTGGTTTAGAAATATATTGGTGAAGGAGCAAGAATGGTCAGAGAAT
TATTCGTCATGGCTAGATAACATGCTCCTTGTTTGATTTTTATTGATGAAGTCGATTCTA
TCGGTGGTGCAAGAATTGATAGTGATAGAGGTGGTGACTCAGAAGTACAAAGAACTATGC
TTGAACTTCTTAACTAAGTAAATAAATTAATAAAAAATATAATTAAAAATGGTATTTTTA
ATTTTTTAAAATTTTTAAATAGCTTGACGGTTTTGAATCTACAAATAACATTAAAATTAT
CATGGCTACTAATCGTATTGATATATTAGATCCTGCTCTTCTTAGACCAGGTCGTATCGA
TAGAAAGGTAGAGTTCCCTAATCCTAGTGTTGAGGTAATTGATAAAACATGATATTTTTT
ATTTAATTATTAAGCATACTATTTATATTTAAAAAATAATTATAAATTTATAGGCTAGAT
TAGAAATCTTATCAATCCACTCAAAGAAAATGAATCTCATGAGAGGTATTAATTTAAAGG
CTATAGCTGAAAAGATGGGAGGAGCTTCTGGTGCAGAATCAAAGGTGAATAATAATTATT
TTATATTTTATTAATTAATATTTTTTTAAATATTTATTATTAGGCTGTATGTACTGAAGC
TGGTATGTTTGCATTAAGAGAAAGAAGAATTCATGTTACTCAAGAAGATTTCGAAATGGC
TGTTTCAAAGGTTATGAAAAAGGACTTAGAAAAAAATATGGCTCTTCGTAAATTATGGAC
ATGA

>TTHERM_00551090(protein)
MSVSQGAGLKAFYLSKIEELSLKVNEKSQNIKRLEAQRNEYNNQVRMLKEEFYSLQSPHS
YVGEVVKPMGKSKVLVKISPDGKYVVNIDKSIKIEDCLPNTRVALKGDSYVLHKLLPTKV
DPLVSLMKVEKVPDSTYDMIGGLDQQVKEVKEVIELPIKHPEIFESLGIAQPKGVLLYGP
PGTGKTLLARAIAHHTDCTFIRVSGSELVQKYIGEGARMVRELFVMARQHAPCLIFIDEV
DSIGGARIDSDRGGDSEVQRTMLELLNQLDGFESTNNIKIIMATNRIDILDPALLRPGRI
DRKVEFPNPSVEARLEILSIHSKKMNLMRGINLKAIAEKMGGASGAESKAVCTEAGMFAL
RERRIHVTQEDFEMAVSKVMKKDLEKNMALRKLWT