Identifiers and Description

Gene Model Identifier

TTHERM_00578640

Standard Name

RPL13 (Ribosomal protein of the large subunit)

Aliases

78.m00129 | PreTt05757 | 3733.m00024

Description

RPL13 60S ribosomal protein L13; Homolog of yeast RPL13/(RPL13e)

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• asparagine metabolic process (IEA) | GO:0006528
• negative regulation of biosynthetic process (IEA) | GO:0009890
• pyrimidine ribonucleotide catabolic process (IEA) | GO:0009222

Domains

• ( PF01294 ) ribosomal protein L13e

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16289.1	1.9990002532767049e-131
	Description: ribosomal protein L13e containing protein (205 aa)
Oxytricha	Contig4065.0.1.g96	3.000458792073453e-56
	Description: Ribosomal protein L13e
DictyBase	DDB_G0291870	2.9993743585281133e-40
	Description: rpl13 on chromosome: 6 position 852689 to 853474
WormBase	WBGene00004425	7.003455847728069e-40
	Description: locus:rpl-13 60S ribosomal protein L13 status:Confirmed UniProt:P91128 protein_id:CCD66399.1
SGD	YDL082W	5.002276765025871e-34
	Description: RPL13A Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp; not essential for viability; has similarity to rat L13 ribosomal protein
Stentor Coeruleus	SteCoe_23192	2.1151310375910805e-19
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00578640(coding)
ATGAAGCACAACAATCAATTACCCGTTGCCTAATTAAGAAAGCATTAATAATTCAGAATT
AAAACTTTCTTCAACCAAGCTGCCTAAAAGAAGGCTAGATTACATGCCAGAAGAGCTTAA
GCCGCCGCTGTCTTCCCCAGACCTACTGAAAAGTTACAACCTGTTGTTAGAAAGCAAACC
CAAAGATACAACAAGTCCACCAAGCTCGGAAGAGGTTTCACCTTACAAGAATTGAAGGCT
GCCGGTATCTCTGCCGCTTTTGCCTAATCTATTGGTATCAAGGTTGACCACAGAAGAAAG
AACAGATGTCAAGAATCTCTTGAATTAAACAAGAAGAGACTTTTGGCTTACGTTAGCAAG
CTCGTTCTCTTCCCTAGACACTAAGGTAAGGCCAAGAAGGGTTTAGTTAATGACACCGCT
GACACCAGCAGTGCTGCTCAAAACGCCTTATAAACCTCTGTTCCTCTTCCCTCTGTCTCC
AAGAGAGAAAAGGCTGTTTCCAACATCGCTGAACTCAGAAAGAAGAAGGTTTACAGAATC
ATCAGACAAGAAAAGACCAACCAAAAGTGGGATGGAAAGAGAAAGGCTAAAGCTCAAGCT
GCCGCTGAACCCAAGGCATGA

>TTHERM_00578640(gene)
ATGAAGCACAACAATCAATTACCCGTTGCCTAATTAAGAAAGCATTAATAATTCAGAATT
AAAACTTTCTTCAACCAAGCTGCCTAAAAGAAGGCTAGATTACATGCCAGAAGAGCTTAA
GCCGCCGCTGTCTTCCCCAGACCTACTGAAAAGTTACAACCTGTTGTTAGAAAGCAAACC
CAAAGGTGAATATCTATCATTCAATCCAAATTAAATCACAAACCGATCACCATTTTTTTC
TTAAAAATTATTGATTCAAAATACAAATATGCATTTTACTTTTTCATTTTACAATTTCCA
TCGAACTCTAAAAGATGGGACAGCTTCCCATGCAATTGTATTTTTTTACAGTTCGTTTTA
ACCAAATAAATGCTGGTCAATCGCTCAGTCAATAAATCAATCAATTAAAGAGTCAATTAA
ATAAAAAAATCACTAGAATTAGGGTAACTTAATCGAATAGATATTTCATTCTTAAGTTAG
CAGATGAATTTAAAATTGTAATAGAAATATAATTAAATGCGGAATACTTTTTAACAAAAT
GGAATTCAATCATAACCTGTATTGCGGAAATCTAGTAAAGTAGATTTAGCTTCTGATTTA
TCTGATTGTTAGATTTGAAATATCATCAGCCTTTAATTAGGTTTTAACTAAATAAATGTA
AATAACACAATTTAGGTATTCTAAAACTTCTCAATAAAGAATATAATCAGTAGACATTAT
GCCAACATATTTAGCAAAGAATATAAAAGCAATTTATGTATACAGTAGATCGATTAATTG
ATTAGGTAGGGAGTCTTAGCGTCAATCAAAGATCAAGTAGATCATTTGGTTTCTAATAAA
TTTAAGCAAGCTAAATTATAAAATATCTAAATACAAATTTAAAAAGACGAAATTATCAAA
ACTCATAAATGAATGATGATGAAATAATTTAAATAGAGCAACTTGTAATATTTGTTCAAT
GAAAAAAAAATATGCAAAATAAAGCCGCCAAATATTTAAAAATTTAGGCATGTTAGGGTA
CATTAAATACTCATTTATCAAAACTCAAATAAACCTTATTGATTGAATGAAATAATTACT
TGCATAATAATTAAAATTGATTGATTCATGATAATGACTGTTTAATTGATTGATTGAAGC
TGAAATATTTAGGAATTGAATATAATTGTAAAAACAATTTAAATTCTACAAAAAAGTTTA
ATAAGGTTAAAACTAAAAGTAAATATAATCCATTCATTTAAAGTTTAATCTTTAAATTAA
GTGAAATCATGCATATTATTTTTGAATGCTTTACAAAATTAAATCGCAATAAAAATAAGA
ATAAAAATAAATACTGATTGGTTTAAACTTCAATTATTTATTAATAAATTTTACTCATCT
ATTTTCTATTAAATTTAGATACAACAAGTCCACCAAGCTCGGAAGAGGTTTCACCTTACA
AGAATTGAAGGCTGCCGGTATCTCTGCCGCTTTTGCCTAATCTATTGGTATCAAGGTTGA
CCACAGAAGAAAGAACAGATGTCAAGAATCTCTTGAATTAAACAAGAAGAGACTTTTGGC
TTACGTTAGCAAGCTCGTTCTCTTCCCTAGGTAAATAAAGAAACATTAATAAATTTTATT
AGCAAATATAAAGAAATAGGCATAGTATTTTTGTATATATCATTTAAATACCTTCAAATA
ATTTACAAGTTAAGCAATTAGATTATGAATTTTAATCTAAAAATTTTAACTTACTTACCA
TTTTATTTGATTTGTATTTTAACTGAGCAAAAATACTTACTGAATATATATATATATATT
TATATGCAAACTAGCCTAAAGATATTTGCAAGAAATTAATATCTGTAATATGGCAATTTC
TTATCTTTATTTTTAATAAAAATAGACACTAAGGTAAGGCCAAGAAGGGTTTAGTTAATG
ACACCGCTGACACCAGCAGTGCTGCTCAAAACGCCTTATAAACCTCTGTTCCTCTTCCCT
CTGTCTCCAAGAGAGAAAAGGCTGTTTCCAACATCGCTGAACTCAGAAAGAAGAAGGTTT
ACAGAATCATCAGACAAGAAAAGACCAACCAAAAGTGGGATGGAAAGAGAAAGGCTAAAG
CTCAAGCTGCCGCTGAACCCAAGGCATGA

>TTHERM_00578640(protein)
MKHNNQLPVAQLRKHQQFRIKTFFNQAAQKKARLHARRAQAAAVFPRPTEKLQPVVRKQT
QRYNKSTKLGRGFTLQELKAAGISAAFAQSIGIKVDHRRKNRCQESLELNKKRLLAYVSK
LVLFPRHQGKAKKGLVNDTADTSSAAQNALQTSVPLPSVSKREKAVSNIAELRKKKVYRI
IRQEKTNQKWDGKRKAKAQAAAEPKA