Identifiers and Description

Gene Model Identifier

TTHERM_00578940

Standard Name

RPN5 (26S proteasome regulatory subunit N5)

Aliases

PreTt05787 | 78.m00159 | 3733.m00633

Description

RPN5 26S proteasome non-ATPase regulatory subunit; Fusion of uncharacterized protein and 26S proteasome subunit.

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• proteasome regulatory particle (ISS) | GO:0005838

Domains

• ( PF01399 ) PCI domain
• ( PF04702 ) Vicilin N terminal region
• ( PF05073 ) Baculovirus P24 capsid protein
• ( PF06102 ) Domain of unknown function (DUF947)
• ( PF08524 ) rRNA processing

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16310.1	9.997093137033517e-262
	Description: hypothetical protein (432 aa)
Oxytricha	Contig21741.0.g7	1.0002223712504345e-79
	Description: PCI domain
DictyBase	DDB_G0281051	8.999119107228014e-72
	Description: psmD12 on chromosome: 3 position 3979792 to 3981586
WormBase	WBGene00004461	3.998862432046419e-53
	Description: locus:rpn-5 status:Confirmed UniProt:Q19324 protein_id:CCD69211.1
SGD	YDL147W	7.999866353200662e-52
	Description: RPN5 Subunit of the COP9 signalosome (CSN) and non-ATPase regulatory subunit of the 26S proteasome lid, similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein
Stentor Coeruleus	SteCoe_7042	4.780892883885469e-25
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences

>TTHERM_00578940(coding)
ATGGAAATTGAAGAAAGCTCCGAATTCGATAGATAGATTGCTTCCCTCCTCGAAAAGGAA
AGAGAAGCTCGTCTCAATAACAAGAGTGAAGAACTTGTCAACATCGTTAAACAAATCGTC
AAATTAGCTTGGGAAGTAAAAAATTATGACAAGCTCTTTGAACTCATGACTACACTTTCT
TAAAGAAGAGGTCAAAGCAAGAAAGCTTAAACTGATATGATCCAAATTGCTATGGGATAT
ATAGATTAGATTTAAGACATTCCCACTAGAATTAGATTAATCGAAACTATTAAAAACATT
TGTGATAAAAAAATTTACTTAGAAGTAGAATATGCTAGATGTTGTCTAAAGCTCGTTAAA
TACAAGGAAAGTGATAACGAAATTAATGAAGCTGCTAAGATTTTGCAAGAAGTTTAAGTT
GAAACTTATGGCTCTATGGATAAGAGAGAAAAGATTGAATTCATCTTATATCAAATGAAG
ATCATGCTTAAGAAGAAAGATTACATTCGTTTGATGATTATTTCAAAGAAGTTAACACCT
TAAGCCTTAAATGATAAAACAATAGTTGATTTGAAGATTTAATATTACGCTTATTTAGTT
GAATATTACTATCATGAAAGCATATATTTGCAAGTTTCTAACTGCTTCTAACAGATTTTT
GATGCAGTGAATGATAAAATAAACAAGGACATTGAATTGCCTACTGTTTTGGATTTTAAC
TTTGATGCTTCCTTCTAGACTACATTTGAAAATTTTGTTGCTTACCTTCTCATCAATAAG
CACTGCCATGAATAGGTTTAATTGTTACAGAAATTAGTAAGCAGCAAGTATAAACACATT
CTAGAAAGATATCCTGCTTTGAAGAATGCAGTTGAATCTTACTTATTAGATGAATTAATT
TCTACAGACCCTGCAAGTTACAATTTACAGAATATTTAATGTTTTTCTAGACCTGAAAAG
TCAGTTCAACACATAACTGATTTCAGAAAATAATTAATTCATCACAATATTCGTGTTATT
AATAAGTACTACTCTTAAATTTCTTTATCCCGTCTTGCTGCATTATTGAATATTTCTTAA
GAAGAAGCTGAAAATGAGCTTTGTGAAATGCAAAACGACTAGCTAGTAAATTGCAAGATT
GATCGTTTGGAAGGCGTAGTTAATTTCAAGCTTAGACGCTCTGAGAACGATATTCTCAAC
GAATGGGCTACCGATGTTAACTAAATCTTATCATTGATTGATCATACTTCTAACTTAATT
AAGAGAGAAGAAGAATAATACATCGAAGCTAAGTGA

>TTHERM_00578940(gene)
ATGGAAATTGAAGAAAGCTCCGAATTCGATAGATAGATTGCTTCCCTCCTCGAAAAGGAA
AGAGAAGCTCGTCTCAATAACAAGAGTGAAGAACTTGTCAACATCGTTAAACAAATCGTA
ACTCATTCTTTTAGAAGTCATTATTGATTATTGTGTAATGAATGAGCTTTATTGCAGTGT
CTTTCTTTGCAATTAGGTGCCATTACATAAAAATTGAAGCTTATTTTTACTCGAGATTAA
TAATAGAATTATGTTTTCTTTCATATATTTCTATTAAAATTTTTTTATTGTAATAAATAG
GTCAAATTAGCTTGGGAAGTAAAAAATTATGACAAGCTCTTTGAACTCATGACTACACTT
TCTTAAAGAAGAGGTCAAAGCAAGAAAGCTTAAACTGATATGATCCAAATTGCTATGGGA
TATATAGATTAGATTTAAGACATTCCCACTAGAATTAGATTAATCGAAACTATTAAAAAC
ATTTGTGATAAAAAAATTTACTTAGAAGTAAAAATTAGATTTAAATAATAAATTTTTTAG
AGGAAGGAATTACTTTCTTAAAATAATTTAAAAATAATGCGAATTTGAAATAAAGTATTT
CTTGTTTTAATAAATAGGTAGAATATGCTAGATGTTGTCTAAAGCTCGTTAAATACAAGG
AAAGTGATAACGAAATTAATGAAGCTGCTAAGATTTTGCAAGAAGTTTAAGTAGACATTT
CCTTTTATTTTATTTAATAATAAATATACAAATAAAAAAGATACGCTAAAAACGATATTT
GAAATTTTTCAATAAAAATTTGAATACATTCAATTCACAAATTGACTATTAATAACTATG
AATCCTACTTAAATTAATTATTACTAAAAGCAAATCAAGATTTAAATCTTGAATTCCATT
TTACACATTACTACATAGTTTAAATTGAAGTATTTTAAATTTAAAGCTTGCAAAAAGAGT
TATCATTTTGAGAAATAGCAAATAAAAACTAATTTTAAACAGATAATATTCTTAAAATTA
AATATTTTTTATGAATAATCAATGTACTTTGAATAATAAAATAATTACTATTCAATCAGA
CAATTTTAGCATTGATTCTCTTTAATAAGCACAATAAGAATAATTAATAATTAAAATAAT
TATTATTTAGGTATTGAAATAATTTAATTAACAATTTTACTGAATTTAATTTTTTAAGAT
AAAGTTAAATGAATTTCCTCAACAATAAAAAAGACATAGTTTTTGTTTAAGAAATGATTA
ATAATTTTTTAGATCATCCATATAGAAAATAATTTTATTACAACACTCTTAATTTATAAA
ATGTGTTAATTAATTATAATTAAATATATAATATTCTTCAATAAATAAATAGCTTGATAT
CATATTTTTATATATTTAAAAATATTATTATTATTCACTCATAGTTTAGTTTGAATATGA
AATATGAAAATGAAATTATTTTAATAATGTGATTATTATAGAATGATTATTAACTTATCT
ATTTATTTAACGAATAGGTTGAAACTTATGGCTCTATGGATAAGAGAGAAAAGATTGAAT
TCATCTTATATCAAATGAAGATCATGCTTAAGAAGAAAGATTACATTCGTTTGATGATTA
TTTCAAAGAAGTTAACACCTTAAGCCTTAAATGATAAAACAATAGTTGATTTGAAGATTT
AATATTACGCTTATTTAGTTGAATATTACTATCATGAAAGCATATATTTGCAAGTTTCTA
ACTGCTTCTAACAGATTTTTGATGCAGTGAATGATAAAATAAACAAGGACATTGAATTGC
CTACTGTTTTGGATTTTAACTTTGATGCTTCCTTCTAGACTACATTTGAAAATTTTGTTG
CTTACCTTCTCATCAATAAGCACTGCCATGAATAGGTTTAATTGTTACAGAAATTAGTAA
GCAGCAAGTATAAACACATTCTAGAAAGATATCCTGCTTTGAAGAATGCAGTTGAATCTT
ACTTATTAGATGAATTAATTTCTACAGACCCTGCAAGTTACAATTTACAGAATATTTAAT
GTTTTTCTAGACCTGAAAAGTCAGTTCAACACATAACTGATTTCAGAAAATAATTAATTC
ATCACAATATTCGTGTTATTAATAAGTACTACTCTTAAATTTCTTTATCCCGTCTTGCTG
CATTATTGAATATTTCTTAAGAAGAAGCTGAAAATGAGCTTTGTGAAATGCAAAACGACT
AGCTAGTAAATTGCAAGATTGATCGTTTGGAAGGCGTAGTTAATTTCAAGCTTAGACGCT
CTGAGAACGATATTCTCAACGAATGGGCTACCGATGTTAACTAAATCTTATCATTGATTG
ATCATACTTCTAACTTAATTAAGAGAGAAGAAGAATAATACATCGAAGCTAAGTGA

>TTHERM_00578940(protein)
MEIEESSEFDRQIASLLEKEREARLNNKSEELVNIVKQIVKLAWEVKNYDKLFELMTTLS
QRRGQSKKAQTDMIQIAMGYIDQIQDIPTRIRLIETIKNICDKKIYLEVEYARCCLKLVK
YKESDNEINEAAKILQEVQVETYGSMDKREKIEFILYQMKIMLKKKDYIRLMIISKKLTP
QALNDKTIVDLKIQYYAYLVEYYYHESIYLQVSNCFQQIFDAVNDKINKDIELPTVLDFN
FDASFQTTFENFVAYLLINKHCHEQVQLLQKLVSSKYKHILERYPALKNAVESYLLDELI
STDPASYNLQNIQCFSRPEKSVQHITDFRKQLIHHNIRVINKYYSQISLSRLAALLNISQ
EEAENELCEMQNDQLVNCKIDRLEGVVNFKLRRSENDILNEWATDVNQILSLIDHTSNLI
KREEEQYIEAK