Identifiers and Description

Gene Model Identifier

TTHERM_00623050

Standard Name

LC3B

Aliases

PreTt07392 | 87.m00172 | 3814.m00877

Description

LC3B thioredoxin; Light chain subunit of ciliary three-headed outer arm dynein (OAD)

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• inorganic molecular entity transmembrane transporter activity (ISS) | GO:0015318 | Ref:16933976
• sodium:inorganic phosphate symporter activity (ISS) | GO:0015319 | Ref:16933976

Biological Process

• cardiac chamber development (ISS) | GO:0003205 | Ref:16933976
• chromatin organization (ISS) | GO:0006325 | Ref:16933976
• glycine catabolic process (ISS) | GO:0006546 | Ref:16933976
• peptidoglycan biosynthetic process (ISS) | GO:0009252 | Ref:16933976
• siderophore metabolic process (ISS) | GO:0009237 | Ref:16933976

Domains

No Data fetched for Domains

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_11983.1	7.002411919958887e-50
	Description: thioredoxin family protein (108 aa)
WormBase	WBGene00010160	0.000000000000020000882446601127
	Description: locus:png-1 Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase status:Confirmed UniProt:Q9TW67 protein_id:CAB04487.2
SGD	YLR043C	0.00000000000020009182674645818
	Description: TRX1 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system which protects cells against oxidative and reductive stress, forms LMA1 complex with Pbi2p, acts as a cofactor for Tsa1p, required for ER-Golgi transport and vacuole inheritance
DictyBase	DDB_G0276057	0.0000000000019997478866288316
	Description: DDB_G0276057 on chromosome: 2 position 6469384 to 6471238
Oxytricha	Contig15740.0.g80	0.00000000009998509410508463
	Description: Thioredoxin

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00623050(coding)
ATGTCTCATCCCTACATAGAAATTACAAGCACCAAGCAATTCGAAGATATTCTCGAAAAG
AACGAATATGTTTTAGTTGATTTCTTTGCTTCCTGGTGTGGCCCTTGCAAAATTTTAGCT
GAATAATTCGAACCTATTAAGAAAGATCACAAGAACCTAACTATTGTTAAGGTTAACATT
GACGAAGAAGATTTAGAATCTATTGTTGAATCTCACAATGTTTCTTCTCTTCCTCACGTT
TTCTTATACCACAAGAAGACTGTTGTTAAATAATTCATTGGTAACCAAAAAGACCAATTA
TGGGAAATGGCTAAACTCAGTGATGCTAAGTGA

>TTHERM_00623050(gene)
ATGTCTCATCCCTACATAGAAATTACAAGCACCAAGCAATTCGAAGATATTCTCGAAAAG
AACGAATATGTTTTAGTTGATTTCTTTGCTTCCTGGTGTGGCCCTTGCAAAATTTTAGCT
GAATAATTCGAACCTATTAAGAAAGATCACAAGAACCTAACTATTGTTAAGGTTAACATT
GACGAAGAAGATTTAGAATCTATTGTTGAATCTCACAATGTTTCTTCTCTTCCTCACGTT
TTCTTATACCACAAGAAGACTGTTGTTAAATGTAATTTCATTTTCGACTTTAAAAGTCTA
TTAACTGATTTTAAAAAATAATTTTTAAATAATTTATAAAAATAGAATTCATTGGTAACC
AAAAAGACCAATTATGGGAAATGGCTAAACTCAGTGATGCTAAGTGA

>TTHERM_00623050(protein)
MSHPYIEITSTKQFEDILEKNEYVLVDFFASWCGPCKILAEQFEPIKKDHKNLTIVKVNI
DEEDLESIVESHNVSSLPHVFLYHKKTVVKQFIGNQKDQLWEMAKLSDAK