Identifiers and Description

Gene Model Identifier

TTHERM_00630440

Standard Name

RRP63 (exosome component RRP6-3)

Aliases

PreTt06557 | 89.m00151 | 3831.m01452

Description

RRP63 3-prime-5-prime exonuclease

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• detection of virus (IEA) | GO:0009597
• protein import into peroxisome matrix, receptor recycling (IEA) | GO:0016562
• protein phosphorylation (IEA) | GO:0006468

Domains

No Data fetched for Domains

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_04332.1	9.997093137033517e-262
	Description: 3-5 exonuclease (506 aa)
Oxytricha	Contig8740.0.1.g10	3.00017180903994e-49
	Description: 3-5 exonuclease
Stentor Coeruleus	SteCoe_7112	2.031092662734811e-42
	Description: None
DictyBase	DDB_G0278079	2.0003218023735366e-33
	Description: exdl2A on chromosome: 3 position 242964 to 245120
SGD	YOR001W	2.000470901975128e-28
	Description: RRP6 Nuclear exosome exonuclease component; has 3-5 exonuclease activity; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay
WormBase	WBGene00000796	4.9988726541653934e-26
	Description: locus:crn-3 status:Confirmed UniProt:G5EBX6 protein_id:CAA90108.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00630440(coding)
ATGAGTGTTAAAAATAAGTATAATATATAAGACTTCGTAAATTCAAACTATTGTGAAACT
AAACCATTTTATAATGGTTAATATATTTTAGTTTAAACAAAAGAGCAACTCCGCGAATGC
ATTTAAGAGATCAAACAGTTTAACAAAATAGGAGTTGATACAGAATAGAGCTTCATGCAG
ACTTATTAGGCCTTTCTTTGTTTAATTTAAATATCTACTGAAGAGAAAGATTATCTGATT
GATTTACTCTCAATAAATGACAAATAATATATTAAGTCAGAGATTGAGTAAATATTCCTG
GATAAAAATATAATTAAAATTTTTTATGCAGGATAAACTGATATCGTATGGCTATAAAGA
GACTATGATATTTTAATATCTAACTATTTTGATATTTAAACTGCTGCAATATTTTTAAAT
AAGGATGAAAGCTGGTCTTTAACTTATCTTCTTTAAAAATACTGCGACTATACTCTTGAA
AAGAAAGAGAAGAAATAACTTTAACTTTCAGAATGGTCTGATCGCCCACTAAGTGAAGAA
TAATTAAATTATGCAGCTCTCGACTCTCATTTCTTAATAAAAATAAGATACGAGCTACTT
CACGAAATGATCAAAAGACTGGATTTCTAAAGAACACTAGAACTTCTTTACAAAATGCAG
AAAGCTACATCTAAAAAATATGAGAAAAAGCCATTTGATGAGTTATTTTACTTCTAAGCT
TTCGAAAAGTAATCTAAAATTTAGGTTAATAGTATTGGAGCTGGGCTTAAGAGTACAACA
GAATGGAAAATTCTTAATATAATTTTCTTAGAACTTGCAGAATTGAGAGAGAGTTACTCT
GAATAGTAAAATAGATATATTCAAAGTGTTTTAACAGAAGAATCATTGCTGCAAATAGCT
TATTCTACCTTTGATGAAATATAATATAAATTAAAAAGTGTATACGAAATTCAAAACTAA
GACTAATTTACTGAAAAGCATTCTTAAGATTTCTTGAATTCAAATAAGGAGAAAATAATT
TCAATTCTAAATAGACACACAATTGAATTAGATAAAATTATTGAGAAATACGAATTGCTA
TGCATACCAATTAAAAATAAAATGCATATCCTTCAGCAAAGAATTGAGAGGAAAAATAAG
ACATTCTAAGAAAAATACTCGATGAAGACTGTACCTTACGAAAACTGCTAAATACTTTCA
CCAGATGGACAGCAATTATGTAACTGTAACAGTAAAAAAATTTAATGGTATCTTAAGAAA
GGGTTAGCTCATCTTGTAAGCGAAAATCCTACAGTTATCAAACTTAACTTCTAGCCAAGT
GGAAAGGGAAATTTTGATTTGGAGGATTAGAAGATCTTTGAAAACAATTACTATTATGTA
ACAGAAAGAGAAAACAAATGTGTTGTCTGTGGTTCTACAGAAAAATTTGCTAAATTTTAC
GTTATTCCATCTCTCTATAGGCGTCATTTTCCAGATATTTTGAAGAGTCATAGATCTTAG
GATATACTGCTTTTGTGTATGAATTGCCATCAAAGAGCAGGAACTTACTGTGATAAAAAG
ATTGACGAAATTTGTTAGTAATATCAAGTTGATAAAATTAGTTTGTAGTATGCTTCAGTG
GTGTAAGACGTTATCTAAAGATTGAGCAGGAGTGCTAGGTCTTTCCAGAAAAATAAGTCT
CATATGCCCAAAGAGAATAAGAAGAAACTAAAATCAATAATTAGATAGAACTATTAGGAT
TTTATAGAGTTAAAGGATATTCAATAAAAGATAGATATTCACCCTGATTCTTATTTTGGA
ATTAACAAGTAAAATTAAATTAAGATTAATGATAAGTTTATATCATATTGCTTGGAAATT
GATAACTTTAAAAAAATTGGTAAAGAGAATTCATGTAATGATTTTAAGAATTAGCATGGT
AAATATGTAGTAGAATAACTTAAAAACTTAAAAGATCTTACTGAATTTGTTCTTATGTGG
CGTTAGTATTTCATTAAAACAATGTAGCCTAAATATTTACCAAGAGATTGGACAGAAAAG
CCTAAAAGAGTAGAACCAGATAACGAAAGTAAATATGATAAAAAGCTTGAATAGATTCAA
ATATTTTCAAACTAATGA

>TTHERM_00630440(gene)
ATGAGTGTTAAAAATAAGTATAATATATAAGACTTCGTAAATTCAAACTATTGTGAAACT
AAACCATTTTATAATGGTTAATATATTTTAGTTTAAACAAAAGAGCAACTCCGCGAATGC
ATTTAAGAGATCAAACAGTTTAACAAAATAGGTATTATTTAAAAATTTTTTTTACCAATC
ATTCAATAAATCATTAAAAATATTTATATATTTATTTATTTATTAATTATAAAAGGAGTT
GATACAGAATAGAGCTTCATGCAGACTTATTAGGCCTTTCTTTGTTTAATTTAAATATCT
ACTGAAGAGAAAGATTATCTGATTGATTTACTCTCAATAAATGACAAATAATATATTAAG
TCAGAGATTGAGTAAATATTCCTGGATAAAAATATAATTAAAATTTTTTATGCAGGATAA
ACTGATATCGTATGGCTATAAAGAGACTATGATATTTTAATATCTAACTATTTTGATATT
TAAACTGCTGCAATATTTTTAAATAAGGATGAAAGCTGGTCTTTAACTTATCTTCTTTAA
AAATACTGCGACTATACTCTTGAAAAGAAAGAGAAGAAATAACTTTAAGTAGAATTTCTT
TATTTGTTTATTTGTTTTATTAACTTCTATTTTTAATTGTTGATAAAAATTAGCTTTCAG
AATGGTCTGATCGCCCACTAAGTGAAGAATAATTAAATTATGCAGCTCTCGACTCTCATT
TCTTAATAAAAATAAGATACGAGCTACTTCACGAAATGATCAAAAGACTGGATTTCTAAA
GAACACTAGAACTTCTTTACAAAATGCAGAAAGCTACATCTAAAAAATATGAGAAAAAGC
CATTTGATGAGTTATTTTACTTCTAAGCTTTCGAAAAGTAATCTAAAATTTAGGTTAATA
GTATTGGAGCTGGGCTTAAGAGTACAACAGAATGGAAAATTCTTAATATAATTTTCTTAG
AACTTGCAGAATTGAGAGAGAGTTACTCTGAATAGTAAAATAGATATATTCAAAGTGTTT
TAACAGAAGAATCATTGCTGCAAATAGCTTATTCTACCTTTGATGAAATATAATATAAAT
TAAAAAGTGTATACGAAATTCAAAACTAAGACTAATTTACTGAAAAGCATTCTTAAGATT
TCTTGAATTCAAATAAGGAGAAAATAATTTCAATTCTAAATAGACACACAATTGAATTAG
ATAAAATTATTGAGAAATACGAATTGCTATGCATACCAATTAAAAATAAAATGCATATCC
TTCAGCAAAGAATTGAGAGGAAAAATAAGACATTCTAAGAAAAATACTCGATGAAGACTG
TACCTTACGAAAACTGCTAAATACTTTCACCAGATGGACAGCAATTATGTAACTGTAACA
GTAAAAAAATTTAATGGTATCTTAAGAAAGGGTTAGCTCATCTTGTAAGCGAAAATCCTA
CAGTTATCAAACTTAACTTCTAGCCAAGTGGAAAGGGAAATTTTGATTTGGAGGATTAGA
AGATCTTTGAAAACAATTACTATTATGTAACAGAAAGAGAAAACAAATGTGTTGTCTGTG
GTTCTACAGAAAAATTTGCTAAATTTTACGTTATTCCATCTCTCTATAGGCGTCATTTTC
CAGATATGTAACAAATCAATTTCACAAAAATTTTTGTTTCACCTTTAATAAATTATTTGC
AATGAGGTTTTATTTAATTAAAAATTATATTAATTAAATTTAGAAATACTGTAATTTTTA
TACACTTCCCTCCTCCATGAACCCTCCTAATTTTTTATCTATAAAGGCTAAACAAGCCAT
TAAATTTTAAAATTTAAAGAAAATGGAAGGGCTAAAACTAGAATAATTACAGTACTTAGA
ACTTTAAATTTTAATTGAAAATAAAAAAAATAATTGAAAGTATTCAATAGTTTAATGAAG
GACTATTCAAACATGAAATATATTTTACAAATCAAATAAAATTAAAATAAATTTTTGAAT
ATAAAAAAATTAGTTTGAAGAGTCATAGATCTTAGGATATACTGCTTTTGTGTATGAATT
GCCATCAAAGAGCAGGAACTTACTGTGATAAAAAGATTGACGAAATTTGTTAGTAATATC
AAGTTGATAAAATTAGTTTGTAGTATGCTTCAGTGGTGTAAGACGTTATCTAAAGATTGA
GCAGGAGTGCTAGGTCTTTCCAGAAAAATAAGTCTCATATGCCCAAAGAGAATAAGAAGA
AACTAAAATCAATAATTAGATAGAACTATTAGGATTTTATAGAGTTAAAGGATATTCAAT
AAAAGATAGATATTCACCCTGATTCTTATTTTGGAATTAACAAGTAAAATTAAATTAAGA
TTAATGATAAGTTTATATCATATTGCTTGGAAATTGATAACTTTAAAAAAATTGGTAAAG
AGAATTCATGTAATGATTTTAAGAATTAGCATGGTAAATATGTAGTAGAATAACTTAAAA
ACTTAAAAGATCTTACTGAATTTGTTCTTATGTGGCGTTAGTATTTCATTAAAACAATGT
AGCCTAAATATTTACCAAGAGATTGGACAGAAAAGCCTAAAAGAGTAGAACCAGATAACG
AAAGTAAATATGATAAAAAGCTTGAATAGATTCAAATATTTTCAAACTAATGA

>TTHERM_00630440(protein)
MSVKNKYNIQDFVNSNYCETKPFYNGQYILVQTKEQLRECIQEIKQFNKIGVDTEQSFMQ
TYQAFLCLIQISTEEKDYLIDLLSINDKQYIKSEIEQIFLDKNIIKIFYAGQTDIVWLQR
DYDILISNYFDIQTAAIFLNKDESWSLTYLLQKYCDYTLEKKEKKQLQLSEWSDRPLSEE
QLNYAALDSHFLIKIRYELLHEMIKRLDFQRTLELLYKMQKATSKKYEKKPFDELFYFQA
FEKQSKIQVNSIGAGLKSTTEWKILNIIFLELAELRESYSEQQNRYIQSVLTEESLLQIA
YSTFDEIQYKLKSVYEIQNQDQFTEKHSQDFLNSNKEKIISILNRHTIELDKIIEKYELL
CIPIKNKMHILQQRIERKNKTFQEKYSMKTVPYENCQILSPDGQQLCNCNSKKIQWYLKK
GLAHLVSENPTVIKLNFQPSGKGNFDLEDQKIFENNYYYVTERENKCVVCGSTEKFAKFY
VIPSLYRRHFPDILKSHRSQDILLLCMNCHQRAGTYCDKKIDEICQQYQVDKISLQYASV
VQDVIQRLSRSARSFQKNKSHMPKENKKKLKSIIRQNYQDFIELKDIQQKIDIHPDSYFG
INKQNQIKINDKFISYCLEIDNFKKIGKENSCNDFKNQHGKYVVEQLKNLKDLTEFVLMW
RQYFIKTMQPKYLPRDWTEKPKRVEPDNESKYDKKLEQIQIFSNQ