Identifiers and Description

Gene Model Identifier

TTHERM_00640040

Standard Name

PHR1 (PHotolyase Repair 1)

Aliases

PreTt10572 | 92.m00114

Description

PHR1 DNA photolyase FAD-binding domain protein; FAD binding domain of DNA photolyase family protein; utilizes visible light and long wavelength UV light to repair cyclobutane pyrimidine dimers

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Biological Process

Domains

  • ( PF00875 ) deoxyribodipyrimidine photolyase
  • ( PF03441 ) FAD binding domain of DNA
  • ( TIGR00591 ) deoxyribodipyrimidine photolyase
  • ( TIGR02765 ) cryptochrome, DASH family
  • ( TIGR02766 ) cryptochrome, plant family

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_01777.1 9.997093137033517e-262
Description: FAD binding domain-DNA photolyase (489 aa)
SGD YOR386W 9.999353957415832e-59
Description: PHR1 DNA photolyase involved in photoreactivation, repairs pyrimidine dimers in the presence of visible light; induced by DNA damage; regulated by transcriptional repressor Rph1p
Oxytricha Contig17048.0.g64 8.001655364039598e-37
Description: FAD binding domain of DNA photolyase

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00640040(coding)
ATGGATATATTAAATAGCAAATAATTTAGTGAAAATCAAAAGAAACAAAAAGTGAATTTG
TTTTGGTTTAGAAGAGATCTTAGATTATTTGACAACGTTGGGCTTTATCATGCTTTAAAG
GAATCTATACCTGTCGTACCTCTGTTTATATTTGACAAAGACATTTTAAATGAGCTCGAA
GATAAAAAGGATTGCAGAGTAGAATTCATTCATAATTATTTGAGTTAAATGTAAGATAAC
CTTAGAAAACATGGATCAACAATGGTTGTCAAACATTCTAATGCAGAAAGTGCTTTCAAG
AGTCTTATGGAGGAATTTGATATCTCTTGTGTATTCACAAACAGAGACTATGAACCATAC
GCAAAAAAGAGAGATTAATAGATTAAAGAGATACTAAACAGTAAAGGAATAGGATTCAAA
GATTTTAAGGACTAGGTTATTTTTGAAGCTAAAGAAGTACATCAAGACGATGGAAGTGCA
TTTAAGGTCTATACTCCTTTCAGTAAAAAATGGATCTCTTTACTTAGTGAACCTGATTAT
TAGAGTTACAAATCAGAGTCACTCATGAATAATTACTGGAAAAGCTAAGTAGAAGTTCCT
TTTCCTACTTTAGAATAGATAGGGTTTTAAAAAACAGGAATAGAGTTTCCACCAAGCTAG
TTAGATGAAGAATTGGTTAAAAATTATGATAAGACAAGAGATTACCCTCACATTAAAACA
TCTTTGATGAGTGTTCATTTGAGATTTGGCACTGTTTCTATCAGAGAGCTTGTTAGGAAA
GCCGTTCTCCTTAATTAGAAATATCTTGATGAGCTCTGCTGGAGAGAGTTCTTTATGATG
ATGATAGATTAGTTTCCTCTATTTGCTACAGAAAATTTCAAAAAGGCTTATAATAAAGTA
GAATGGAGAAACAACCCAGAGGAGTTTAAGGCATGGTGCGAAGGCAAAACTGGTTACCCT
TTATTAGATGCAGGAATGAGGTAACTAAATAAAACAGGTTACTTACCTAATAAGCTTAGA
ATGATTGCTGCAAGCTTCTTAACTAAAAATTTACTTATCGATTGGAGATGGGGCGAGAGG
TACTTTGCCTAAAAGTTAATAGATTACGACCTAGCAGCTAATGTAGGAGGATGGCAGTGG
GTAAATGGTTCAGGAACAGACTAAGCCCCATACATTAGAGTATTAGATCCTGTAATGCAA
CAAAAAAAGTATGATCCTGATTTCAAATACGTTAAAACTTGGGTTGAAGATTTTAATGAA
GATACCTACCCAAAAAGAATTGTTAACTATGAAGAGTCAAGACAAAGAGCCCTAGATGCT
TTCTCAATAGTTTTCAAAAAAAATTAAATTAAGCAGCATTAGCAATAAATAAAGGAAAAA
AAAGCAAATTATTAGCACTATTATAAAAATAAAAAATGA


>TTHERM_00640040(gene)
ATGGATATATTAAATAGCAAATAATTTAGTGAAAATCAAAAGAAACAAAAAGTGAATTTG
TTTTGGTTTAGAAGAGATCTTAGATTATTTGACAACGTTGGGCTTTATCATGCTTTAAAG
GAATCTATACCTGTCGTACCTCTGTTTATATTTGACAAAGACATTTTAAATGAGCTCGAA
GATAAAAAGGATTGCAGAGTAGAATTCATTCATAATTATTTGAGTTAAATGTAAGATAAC
CTTAGAAAACATGGATCAACAATGGTTGTCAAACATTCTAATGCAGAAAGTGCTTTCAAG
AGTCTTATGGAGGAATTTGATATCTCTTGTGTATTCACAAACAGAGACTATGAACCATAC
GCAAAAAAGAGAGATTAATAGATTAAAGAGATACTAAACAGTAAAGGAATAGGATTCAAA
GATTTTAAGGACTAGGTTATTTTTGAAGCTAAAGAAGTACATCAAGACGATGGAAGTGCA
TTTAAGGTCTATACTCCTTTCAGTAAAAAATGGATCTCTTTACTTAGTGAACCTGATTAT
TAGAGTTACAAATCAGAGTCACTCATGAATAATTACTGGAAAAGCTAAGTAGAAGTTCCT
TTTCCTACTTTAGAATAGATAGGGTTTTAAAAAACAGGAATAGAGTTTCCACCAAGCTAG
TTAGATGAAGAATTGGTTAAAAATTATGATAAGACAAGAGATTACCCTCACATTAAAACA
TCTTTGATGAGTGTTCATTTGAGATTTGGCACTGTTTCTATCAGAGAGCTTGTTAGGAAA
GCCGTTCTCCTTAATTAGAAATATCTTGATGAGCTCTGCTGGAGAGAGTTCTTTATGATG
ATGATAGATTAGTTTCCTCTATTTGCTACAGAAAATTTCAAAAAGGCTTATAATAAAGTA
GAATGGAGAAACAACCCAGAGGAGTTTAAGGCATGGTGCGAAGGCAAAACTGGTTACCCT
TTATTAGATGCAGGAATGAGGTAACTAAATAAAACAGGTTACTTACCTAATAAGCTTAGA
ATGATTGCTGCAAGCTTCTTAACTAAAAATTTACTTATCGATTGGAGATGGGGCGAGAGG
TACTTTGCCTAAAAGTTAATAGATTACGACCTAGCAGCTAATGTAGGAGGATGGCAGTGG
GTAAATGGTTCAGGAACAGACTAAGCCCCATACATTAGAGTATTAGATCCTGTAATGCAA
CAAAAAAAGTATGATCCTGATTTCAAATACGTTAAAACTTGGGTTGAAGATTTTAATGAA
GATACCTACCCAAAAAGAATTGTTAACTATGAAGAGTCAAGACAAAGAGCCCTAGATGCT
TTCTCAATAGTTTTCAAAAAAAATTAAATTAAGCAGCATTAGCAATAAATAAAGGAAAAA
AAAGCAAATTATTAGCACTATTATAAAAATAAAAAATGA


>TTHERM_00640040(protein)
MDILNSKQFSENQKKQKVNLFWFRRDLRLFDNVGLYHALKESIPVVPLFIFDKDILNELE
DKKDCRVEFIHNYLSQMQDNLRKHGSTMVVKHSNAESAFKSLMEEFDISCVFTNRDYEPY
AKKRDQQIKEILNSKGIGFKDFKDQVIFEAKEVHQDDGSAFKVYTPFSKKWISLLSEPDY
QSYKSESLMNNYWKSQVEVPFPTLEQIGFQKTGIEFPPSQLDEELVKNYDKTRDYPHIKT
SLMSVHLRFGTVSIRELVRKAVLLNQKYLDELCWREFFMMMIDQFPLFATENFKKAYNKV
EWRNNPEEFKAWCEGKTGYPLLDAGMRQLNKTGYLPNKLRMIAASFLTKNLLIDWRWGER
YFAQKLIDYDLAANVGGWQWVNGSGTDQAPYIRVLDPVMQQKKYDPDFKYVKTWVEDFNE
DTYPKRIVNYEESRQRALDAFSIVFKKNQIKQHQQQIKEKKANYQHYYKNKK