Identifiers and Description

Gene Model Identifier

TTHERM_00649110

Standard Name

RPN12 (26S proteasome regulatory subunit N12)

Aliases

PreTt09225 | 94.m00143 | 3677.m00051

Description

RPN12 26S proteasome non-ATPase regulatory subunit 8

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Cellular Component

• cell surface (IEA) | GO:0009986

Molecular Function

• gluconate 2-dehydrogenase activity (IEA) | GO:0008873

Biological Process

• pyrimidine ribonucleotide biosynthetic process (IEA) | GO:0009220

Domains

• ( PF03399 ) SAC3/GANP family

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_17868.1	9.99955252024689e-165
	Description: 26S proteasome non-ATPase regulatory subunit Nin1/mts3 family protein (271 aa)
Oxytricha	Contig2043.0.g70	1.9998323414791308e-36
	Description: SAC3/GANP/Nin1/mts3/eIF-3 p25 family
DictyBase	DDB_G0272564	1.000137892321693e-31
	Description: psmD8-1 on chromosome: 2 position 2397564 to 2398683
WormBase	WBGene00004468	4.998021988471165e-24
	Description: locus:rpn-12 26S proteasome non-ATPase regulatory subunit 8 status:Confirmed UniProt:Q23449 protein_id:CAA93778.1
Stentor Coeruleus	SteCoe_16339	1.5628821893349888e-18
	Description: None
SGD	YFR052W	0.00000000000003999587784428659
	Description: RPN12 Subunit of the 19S regulatory particle of the 26S proteasome lid; synthetically lethal with RPT1, which is an ATPase component of the 19S regulatory particle; physically interacts with Nob1p and Rpn3p

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21637855: Xiong J, Yuan D, Fillingham JS, Garg J, Lu X, Chang Y, Liu Y, Fu C, Pearlman RE, Miao W (2011) Gene network landscape of the ciliate Tetrahymena thermophila. PloS one 6(5):e20124

Sequences

>TTHERM_00649110(coding)
ATGACTTTATAGTAAGCTTAACCTCTCTTAGCAGAATTTGAAACTTTAATAGCTTCTAAC
AGCAATGCTCCTAGAGTAGGCTAATTAATATCTTAGTTAAAGCGTATTATATTCCTCCTA
CCCAGTAATGATCCTCTCACTAAAACAAAAAATGAATAAGAGTTGATTGCATCCAGACGT
TTCCACGAATTGTGCATTTTACATAGCATTTAATCCAAAAACATTCAAAGCTTTGAGTCA
GCAATTAATTACTTAAGAGCTTATTACGAAAATTATCCTTAATTGCCAGCTTCTCAAGAT
AGAAATTAAATTATTGCATTGAATTTGTTATATCTTCTTTCTTTCAATAAAAACACTGAA
TACCATTCAGCTTTGGAGTTAGTTCCAGTTGAAGACTTGCACAATAATTAATTTATTCAA
TTCGTTACTGAATTAGAAAAGTAGTTGGCTATTGGTAACTACTCTGAAGCTCTCCTTTCT
AAAAACAAGTCTCCTCTTGCTCACTTCGATATATTCTTGGATAGAATCTTCGAAACTATT
AGATTTGAAACTGCTAGAAGTGCTGAAAAAGCCTATGAAAGTTTATCAATAAATGATGCA
ATTAAATTATTTAACCTTCAAAATGCCGATTAACTTAAAAGCTTTTCAGCTGAACAATCA
AAATAAGGAGAAGAACAAGGATTTTCTTGGGTTTTCGAAAATAATAGATTAGTCTTCCGT
CATAAAGATTCTGATAAAAAAGCATTATTCAACTCTGAATTTCTTATTTCAACAGCACTA
AGTTATGCTCATGAAATTGAAAAGATTGTTTGA

>TTHERM_00649110(gene)
ATGACTTTATAGTAAGCTTAACCTCTCTTAGCAGAATTTGAAACTTTAATAGCTTCTAAC
AGCAATGCTCCTAGAGTAGGCTAATTAATATCTTAGTTAAAGGTATTTCTTTTAAAAGAA
AAAATTAAGTTTAGTATCTATTTTAAGTGAATTTAATCAATCAATAAATCATTTACTTCT
AAATATCAAACATTTACTTTTATAAAAACAAATAGCGTATTATATTCCTCCTACCCAGTA
ATGATCCTCTCACTAAAACAAAAAATGAATAAGAGTTGATTGCATCCAGTAATGAACAGC
TTTAATTTTTAATCTCTAAATTATTTCATAAAACAGATAAAACGATAAATTGGGAGTATT
AAATATTTGTTTTAAAAAAGGACGTTTCCACGAATTGTGCATTTTACATAGCATTTAATC
CAAAAACATTCAAAGCTTTGAGTCAGCAATTAATTACTTAAGAGCTTATTACGAAAATTA
TCCTTAATTGCCAGCTTCTCAAGATAGAAATTAAATTATTGCATTGAATTTGTTATATCT
TCTTTCTTTCAATAAGTAATTCAATATAAATAAATTTTAAAATAGAATTAATAAATTTTA
TTATTAAATAGAAACACTGAATACCATTCAGCTTTGGAGTTAGTTCCAGTTGAAGACTTG
CACAATAATTAATTTATTCAATTCGTTACTGAATTAGAAAAGTAGTTGGCTATTGGTAAC
TACTCTGAAGCTCTCCTTTCTAAAAACAAGTCTCCTCTTGCTCACTTCGATATATTCTTG
GATAGAATCTTCGAAACTATTAGGTAACTTAGGATATTCTTTTGATTTTTAACTGATTAA
GAGATTTATTCTTTATATTTATAAAAAATGAATTTAAATGATTCATTAAATGTGTTAGAG
AGCGTTTGTTAATAGAGTTTATTAAGGGAATTATAACAAATAAATTAGTAGAAACAAATA
AAAGCTAAGAAATTAATATTAATTTTAAAAAAACAGATTTGAAACTGCTAGAAGTGCTGA
AAAAGCCTATGAAAGTTTATCAATAAATGATGCAATTAAATTATTTAACCTTCAAAATGC
CGATTAACTTAAAAGCTTTTCAGCTGAACAATCAAAATAAGGAGAAGTAAATTAACTATT
TGAATGAGCAATTAATTAATCAATAATTATTATTTTTTTTAAGGAACAAGGATTTTCTTG
GGTTTTCGAAAATAATAGATTAGTCTTCCGTCATAAAGATTCTGATAAAAAAGCATTATT
CAACTCTGAATTTCTTATTTCAACAGCACTAAGTTATGCTCATGAAATTGAAAAGATTGT
TTGA

>TTHERM_00649110(protein)
MTLQQAQPLLAEFETLIASNSNAPRVGQLISQLKRIIFLLPSNDPLTKTKNEQELIASRR
FHELCILHSIQSKNIQSFESAINYLRAYYENYPQLPASQDRNQIIALNLLYLLSFNKNTE
YHSALELVPVEDLHNNQFIQFVTELEKQLAIGNYSEALLSKNKSPLAHFDIFLDRIFETI
RFETARSAEKAYESLSINDAIKLFNLQNADQLKSFSAEQSKQGEEQGFSWVFENNRLVFR
HKDSDKKALFNSEFLISTALSYAHEIEKIV