Identifiers and Description

Gene Model Identifier

TTHERM_00658750

Standard Name

RRM41 (RNA recognition motif-containing protein 41)

Aliases

PreTt02160 | 97.m00146 | 3724.m00053

Description

RRM41 RNA recognition motif protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF00098 ) Zinc knuckle

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_16217.1 5.9995201161793426e-102
Description: RNA binding protein (316 aa)
Oxytricha Contig1956.0.g14 0.00000019998969434520019
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase WBGene00003902 0.0000029996948234116693
Description: locus:pab-1 status:Confirmed UniProt:Q9U302 protein_id:CAA21572.1
DictyBase DDB_G0283687 0.000004000864880866421
Description: DDB_G0283687 on chromosome: 4 position 982205 to 984735
SGD YER165W 0.000004000864880866421
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00658750(coding)
ATGTCATTCTCTATTAAAAGTAATTAGATTGATAAATAGATAGATAGACAGAAAAGCAGA
TCAAACAAAGTGATATATATTTATAAAACTATTAATCAAAGAAAGGAAAGTCATAAAAAA
AATAATAATAAATTAGAAGAAATAAATAAATAAATTTTGAAAAAATAATAATTGCATTAA
ATTTAAAAAATGTCTCGCCCATAAACAAAGCTTTATGTTGCCAAATTCGGTAACAACGTA
GGTAGAAAAGAAATCGAAGAAACTTTTGGTAAGTATGGTGATATCTATAGTTGCAAAGTA
AATGACCGTGAAGGTTATGCAACTGTATCTTACAAATATTAAGATTAAGCTGATAAAGCT
ATTTCAAAACTTAATGGATCTGATGTTTTAGGTGGAAGTTTATTGGTAGAACATACTCTC
AAGAAGAGCAGAGATGATGACCATAGCAGATATCCCAGAGACAGCAGATATGGTAACAGC
AGTTATAGAGATCAAAATGGATACAGAGGAGGTCCTTAAAGCTCTTCTCGTTATGGTGGA
GATCGTGGTCGCAGTAGTGGAGATAGAGATAGCTACAGAAGAGGAACTAGTGGACCACCT
AGAACTGATAAAGAAAAATATATGAAGGAAGGTTTATGCTTCACCTGCAAGGGATAAGGT
CATATCTCTAAAAATTGTCCTGAAGCTAGAAACGGTGGAAGTGGAAGAGACAGAAGAGAC
TCTAGAGGCGGAAGAGTTAATGGATTTAGACCTGATAGAGAAAGAAGACCTTATAGAGAA
AGAAGTAGAAGTAATGATAGAAGCAAGGGCAAGAGCAGAAGAGACAATAGCAGAAGCAGA
AGCCCTCATGATAAGTATGCTGACAAGGATAGAAAGAGAAGATCAAGAAAGCACTCTAGA
AAGAGCAGTTCTTCTAGCAGCCACTCAGGAAGATCTAATTCTAGAAAGGACAGAAAGAGA
TCTGAATCTTCCTCTTCTCAATCCTCTAGATCAAATTCTAATTCTAGCCGCTCTAATTCA
GCAAGCGTTAATAAGTAATAAAATGGAGATATGAAAATGAACGGCAACATGAATGACTAA
ATTAAAGATATGAATGTTTCTCAATGA


>TTHERM_00658750(gene)
ATGTCATTCTCTATTAAAAGTAATTAGATTGATAAATAGATAGATAGACAGAAAAGCAGA
TCAAACAAAGTGATATATATTTATAAAACTATTAATCAAAGAAAGGAAAGTCATAAAAAA
AATAATAATAAATTAGAAGAAATAAATAAATAAATTTTGAAAAAATAATAATTGCATTAA
ATTTAAAAAATGTCTCGCCCATAAACAAAGCTTTATGTTGCCAAATTCGGTAACAACGTA
GGTAGAAAAGAAATCGAAGAAACTTTTGGTAAGTATGGTGATATCTATAGTTGCAAAGTA
AATGACCGTGAAGGTTATGCAACTGTATCTTACAAATATTAAGATTAAGCTGATAAAGCT
ATTTCAAAACTTAATGGATCTGATGTTTTAGGTGGAAGTTTATTGGTAGAACATACTCTC
AAGAAGAGCAGAGATGATGACCATAGCAGATATCCCAGAGACAGCAGATATGGTAACAGC
AGTTATAGAGATCAAAATGGATACAGAGGAGGTCCTTAAAGCTCTTCTCGTTATGGTGGA
GATCGTGGTCGCAGTAGTGGAGATAGAGATAGCTACAGAAGAGGAACTAGTGGACCACCT
AGAACTGATAAAGAAAAATATATGAAGGAAGGTTTATGCTTCACCTGCAAGGGATAAGGT
CATATCTCTAAAAATTGTCCTGAAGCTAGAAACGGTGGAAGTGGAAGAGACAGAAGAGAC
TCTAGAGGCGGAAGAGTTAATGGTAAATATTTGATATAATCAATCATATATGTTTAATAA
ATAAAATCCTCTTAACTCCTTTAGAATATTTAGTTTTATTTGATAAAAAAATGAATAAAT
ATAATTTTAAAATGAATTATTTAACATTTTCGAATGCTAAATATTTAAGGAATCATAGAT
TTTGAAAATTTATTTGGTTTATTGGTCTTGCGTTTAAACAAATCTCATTAAAATTTAAAA
ATGAGTTTTTTTGTTTTTTAAATTCTTAACTCCTTAGGACTGAAATTGATTGATTAATTT
ATTTAATTTTCTGCTTTTCTTCTATTATATTAGCTTAATTTGTTGTGAAAAAGGACAATA
GATAGATAATTAGATAGTTAGCTAAAAATTCTTTTTAAATTAATCTCAAACTTCCTTTTA
TATTAAATAATCTAATTAATTAATTAATATTCACTGATGTGTCTAATTAGTTAATTAATT
TCAGAGAAATAAAGCACCACCAAAATACAACTTAAGCCACTTTTTTTTATTTTTTGAATA
TTGCTCCAAAAGCATAAAAATTTAAATTAGAATATAATCACACATACATACATAGTCATT
TACTTATATTTAGAAACAATTTTATATAAATAATAGGATTTAGACCTGATAGAGAAAGAA
GACCTTATAGAGAAAGAAGTAGAAGTAATGATAGAAGCAAGGGCAAGAGCAGAAGAGACA
ATAGCAGAAGCAGAAGCCCTCATGATAAGTATGCTGACAAGGATAGAAAGAGAAGATCAA
GAAAGCACTCTAGAAAGAGCAGTTCTTCTAGCAGCCACTCAGGAAGATCTAATTCTAGAA
AGGACAGAAAGAGATCTGAATCTTCCTCTTCTCAATCCTCTAGATCAAATTCTAATTCTA
GCCGCTCTAATTCAGCAAGCGTTAATAAGTAATAAAATGGAGATATGAAAATGAACGGCA
ACATGAATGACTAAATTAAAGATATGAATGTTTCTCAATGA


>TTHERM_00658750(protein)
MSFSIKSNQIDKQIDRQKSRSNKVIYIYKTINQRKESHKKNNNKLEEINKQILKKQQLHQ
IQKMSRPQTKLYVAKFGNNVGRKEIEETFGKYGDIYSCKVNDREGYATVSYKYQDQADKA
ISKLNGSDVLGGSLLVEHTLKKSRDDDHSRYPRDSRYGNSSYRDQNGYRGGPQSSSRYGG
DRGRSSGDRDSYRRGTSGPPRTDKEKYMKEGLCFTCKGQGHISKNCPEARNGGSGRDRRD
SRGGRVNGFRPDRERRPYRERSRSNDRSKGKSRRDNSRSRSPHDKYADKDRKRRSRKHSR
KSSSSSSHSGRSNSRKDRKRSESSSSQSSRSNSNSSRSNSASVNKQQNGDMKMNGNMNDQ
IKDMNVSQ