Identifiers and Description

Gene Model Identifier

TTHERM_00663830

Standard Name

XRN3 (5'-3' exoribonuclease 3)

Aliases

PreTt23830 | 98.m00173 | 3736.m00071

Description

XRN3 XRN 5-prime-3-prime exonuclease amine-terminal protein; XRN 5'-3' exonuclease N-terminus family protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Domains

  • ( PF03159 ) XRN 5'-3' exonuclease N-terminus
  • ( PF07609 ) conserved hypothetical protein

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_17204.1 9.997093137033517e-262
Description: XRN 5-3 exonuclease (841 aa)
Oxytricha Contig14644.0.g34 1.9997677415930956e-65
Description: XRN 5-3 exonuclease N-terminus
WormBase WBGene00006964 1.9990871925214856e-61
Description: locus:xrn-2 5-3 exoribonuclease 2 homolog status:Partially_confirmed UniProt:Q9U299 protein_id:CAB54449.2
SGD YOR048C 1.0001055852164665e-60
Description: RAT1 Nuclear 5 to 3 single-stranded RNA exonuclease, involved in RNA metabolism, including rRNA and snRNA processing as well as poly (A+) dependent and independent mRNA transcription termination
DictyBase DDB_G0276137 2.9997246065828143e-59
Description: xrn1 on chromosome: 2 position 6232603 to 6238286
Stentor Coeruleus SteCoe_17518 2.8625185805493937e-20
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00663830(coding)
ATGGGTGTACCAGGCTATTTTAGTTGGATTCACAGAAAGTATCCTTATCAAGTCAGAAAA
GTTAGACGCAACGGAAGAAAGAAACACATCGACTGCCTTTACATAGATGTAAACGGTATT
TGCTACTAATACGCTAGAGATGAGCACCAATATAACTATTTACTCAAACCTAAATCTCTT
GAAACTATATTTAAGCAAGTCATTGATCACATCGACTCAATTATCGAACTAGTAGAGCCT
TAGCTCTAAGTTTATCTTATGTTAGATGGTCCATGCCCAAGAGCAAAGATGAACTAGCAA
AGACAAAGAAGATTCCATGCTGAAATGCATCATTTAACATTGAAGGATGAGCTCAAAAAG
CATGGATTTGATGTGAAGGAAGAAACCGTACCAAATAATTCAATTGCTCCAGGAACTCCT
TTTATGTATGAACTAAATGAGTAGTTAAGGAGATATATTGAAACTCGTATTGCTTTATCT
AACAAAGCTATGACTGATGGAGAAGCAGATCATAAAGAGCATTAGGTAAGTTACAAGAAG
CTCTAATTTATCTTGAGTGATAGTAATGCTCCTGGCGAAGGTGAACATAAAATCCTTGAA
GTAATCAGAAAACATACTAATTTGTAGCTCACACATTGTATTGTTGGAGCTGATGCAGAT
TTACTCCTCCTTTCTCTTGCAACAATTGGCAAGCGTATTTTGATTTTAAGAGAAAACTCA
AAATTTAAAGGAGATAAGACAGATCTCGAAAAAGAATTATAGAAGCTTAAGGAAGAACTT
AGTCATCCACAATTAGACTTGCACAAAGAAAGAGAGTACGATTTAGTTGACATTAATGGA
TTGAAGAGAGTAATTCTTGATAAGTATAAGAAAATGTTTGACAATAAACAAGTATAGAAT
CTAAAATATAATCCTATGTCTCTTATGGATGATTTTGTCTTTTTAAGTTTATTCGCTGGT
AATGACTTCCTTCCTCGTTAGAATTACATGCAAATTAAATCAGAAAAAGGACATAAACCT
AACATTTTAGACAAGCTTATCGAAAAATATGATAGCTATCTTGAGACTGCTACAAGTTAT
CTTAGTGATAGAGGTTTTATTAAATACAATTAAATCATAGAATTTTTTAAGCAAGTAGCC
ACTATTGAGCCTAAATTCAAGAATAATAGAATTTTCGAAGCTCCTTAAAAAGAAGAGAAA
TCGGTCTTTGATTACGTCAAAATTATGAGTTAGAAGTAAATCAATAACGTTGAAGATATT
AAGGATTAGGATTTGATTGATTACGATTTCAAAGAAGAAGACCTTAAATTATAATAGACC
AGCTCTGTAAATGAAGAAACAGAAATCCCTAAGGATATTATTCCTATTTCTGATAGCGAT
GAAGATTAGGAGGAATAAAAATAAAGCCATGATAAAGAATATCACAAAAAAAATAAAAAG
GAATAGAAAAAGCATCACAATCAACATGATAAGGATAATTAATTAGCAAGTGGAACTGAA
GATGAATAGAAAAAGTAAAAGTAGAATCAAGAAGATGATGAAGAAGATGAAATTCAGAAA
ATATTGAGTGATGAAATGAATGGTAAAGAAATTTATTTGAAAGAAAAACTAAAAGTGACG
AATTAGTAAGAATATGATTTAATTATCATGAAATATCTTGAAGGTTTTGAATTCACCCTT
CTTTACTATTTCCGTGGTATTGAGAAAGCTTCATGGAATTACTTTTACCCTCACTATTAT
GCTCCTTTAACTCAAGATGTTGTTGAATTCTTAGAAAGAAATCCTAAATTTGAAGTTAAA
TTTGTCAAAACTCAGCCATTCTAACCTTACAAGCAACTTTTAGCTATTCTTCATCCAGAC
AATGAAGCCCTCTTACCTGCCGAATTCAAAGGTTTATTTAAAAAATATCTACAACCTTTT
TGCCCTTAAATTTTAGATATTGATAAGTATGGAGCTACTATGGAGCATATGTAAATTATA
AAGCTACCTTTTATTGATGTGAATGTCTTAGAATAAGCTTACCAAGAAGGTGAAAAGGCT
CTTGAAAAGTCAAAAAATGAATATGATAAGAACAGAAATATAAGATCATAAGATTTCATT
TTTGAATATGACTTGAATTCTTCTATTAACATTCCTGTTTTTAACAAACTTGTTCACCAC
TAGATCATAGAAAAAGCTAATGTGCACATAATTCCATTTAATCATTTAGATGCAACTTTA
CCTGATAAAATTACAAATTTAACTGTAGACATGGAAAAGAAAAATGCAGAAAGACAGCAG
TTTGAATAGAAAAAGAAGTTTAAGAAGTAGGATAGAGATGACTCAGAAGAATAAAATCAA
TACGAAAAAAAAGGAAAACACCATTACAAAAATGATAATCAAGATGAAAACCAAGAATAC
TCTAAGCATGGACATGGCCATGATAGTCACAAAGGACATTAACAACATGGAGGTCATGAA
GGTCATCATAAAAATTTCCATGGTACTCATCATTAGGGACATAATAAGCAAGAAGAAGAT
GATTGA


>TTHERM_00663830(gene)
ATGGGTGTACCAGGCTATTTTAGTTGGATTCACAGAAAGTATCCTTATCAAGTCAGAAAA
GTTAGACGCAACGGAAGAAAGAAACACATCGACTGCCTTTACATAGATGTAAACGGTATT
TGCTACTAATACGCTAGAGATGAGCACCAATATAACTATTTACTCAAACCTAAATCTCTT
GAAACTATATTTAAGCAAGTCATTGATCACATCGACTCAATTATCGAACTAGTAGAGCCT
TAGCTCTAAGTTTATCTTATGTTAGGTAAAATTTTCTAACACTTATATTATTTTAAACGC
TATTAATTTAACATTTTTTTTGTATTTTCTTTACTGATCCAATTGAAACGGTAATTCTTA
TACCTGAGGTTTTCAAATATGAAATCAGAAGAATACTTGGGTCTTCATGTTATTCAAAAC
AATTTTTTTTAATATTTAGCTTAGCAAATCCATTCTAACCAAATTTGAGTGGTTTTGAAA
GCTATTTTTGCATGATGAGATTCAAAAAAAATTAATTTTAATTAAAACTTTTCGCCATCT
TTTATATTTAAAAAATTATTCTTAAAAAAGATGGTCCATGCCCAAGAGCAAAGATGAACT
AGCAAAGACAAAGAAGATTCCATGCTGAAATGCATCATTTAACATTGAAGGATGAGCTCA
AAAAGCATGGATTTGATGTGAAGGAAGAAACCGTACCAAATAATTCAATTGCTCCAGGAA
CTCCTTTTATGTATGAACTAAATGAGTAGTTAAGGAGATATATTGAAACTCGTATTGCTT
TATCTAACAAAGCTATGACTGATGGAGAAGCAGATCATAAAGAGCATTAGGTAAGTTACA
AGAAGCTCTAATTTATCTTGAGTGATAGTAATGCTCCTGGCGAAGGTGAACATAAAATCC
TTGAAGTAATCAGAAAACATACTAATTTGTAGCTCACACATTGTATTGTTGGAGCTGATG
CAGATTTACTCCTCCTTTCTCTTGCAACAATTGGCAAGCGTATTTTGATTTTAAGAGAAA
ACTCAAAATTTAAAGGAGATAAGGTATTTATTTATTTAATAGACTCTTTAATTATTAATT
TTATTAATTAAAAAAATTAATTAAAACAGACAGATCTCGAAAAAGAATTATAGAAGCTTA
AGGAAGAACTTAGTCATCCACAATTAGACTTGCACAAAGAAAGAGAGTACGATTTAGTTG
ACATTAATGGATTGAAGAGAGTAATTCTTGATAAGTATAAGAAAATGTTTGACAATAAAC
AAGTATAGAATCTAAAATATAATCCTATGTCTCTTATGGATGATTTTGTCTTTTTAAGTT
TATTCGCTGGTAATGACTTCCTTCCTCGTTAGAATTACATGCAAATTAAATCAGAAAAAG
GACATAAACCTAACATTTTAGACAAGCTTATCGAAAAATATGATAGCTATCTTGAGACTG
CTACAAGTTATCTTAGTGATAGAGGTTTTATTAAATACAATTAAATCATAGAATTTTTTA
AGCAAGTAGCCACTATTGAGCCTAAATTCAAGAATAATAGAATTTTCGAAGCTCCTTAAA
AAGAAGAGAAATCGGTCTTTGATTACGTCAAAATTATGAGTTAGAAGTAAATCAATAACG
TTGAAGATATTAAGGATTAGGATTTGATTGATTACGATTTCAAAGAAGAAGACCTTAAAT
TATAATAGACCAGCTCTGTAAATGAAGAAACAGAAATCCCTAAGGATATTATTCCTATTT
CTGATAGCGATGAAGATTAGGAGGAATAAAAATAAAGCCATGATAAAGAATATCACAAAA
AAAATAAAAAGGAATAGAAAAAGCATCACAATCAACATGATAAGGATAATTAATTAGCAA
GTGGAACTGAAGATGAATAGAAAAAGTAAAAGTAGAATCAAGAAGATGATGAAGAAGATG
AAATTCAGAAAATATTGAGTGATGAAATGAATGGTAAAGAAATTTATTTGAAAGAAAAAC
TAAAAGTGACGAATTAGTAAGAATATGATTTAATTATCATGAAATATCTTGAAGGTTTTG
AATTCACCCTTCTTTACTATTTCCGTGGTATTGAGAAAGCTTCATGGAATTACTTTTACC
CTCACTATTATGCTCCTTTAACTCAAGATGTTGTTGAATTCTTAGAAAGAAATCCTAAAT
TTGAAGTTAAATTTGTCAAAACTCAGCCATTCTAACCTTACAAGCAACTTTTAGCTATTC
TTCATCCAGACAATGAAGCCCTCTTACCTGCCGAATTCAAAGGTTTATTTAAAAAATATC
TACAACCTTTTTGCCCTTAAATTTTAGATATTGATAAGTATGGAGCTACTATGGAGCATA
TGTAAATTATAAAGCTACCTTTTATTGATGTGAATGTCTTAGAATAAGCTTACCAAGAAG
GTGAAAAGGCTCTTGAAAAGTCAAAAAATGAATATGATAAGAACAGAAATATAAGATCAT
AAGATTTCATTTTTGAATATGACTTGAATTCTTCTATTAACATTCCTGTTTTTAACAAAC
TTGTTCACCACTAGATCATAGAAAAAGCTAATGTGCACATAATTCCATTTAATCATTTAG
ATGCAACTTTACCTGATAAAATTACAAATTTAACTGTAGACATGGAAAAGAAAAATGCAG
AAAGACAGCAGTTTGAATAGAAAAAGAAGTTTAAGAAGTAGGATAGAGATGACTCAGAAG
AATAAAATCAATACGAAAAAAAAGGAAAACACCATTACAAAAATGATAATCAAGATGAAA
ACCAAGAATACTCTAAGCATGGACATGGCCATGATAGTCACAAAGGACATTAACAACATG
GAGGTCATGAAGGTCATCATAAAAATTTCCATGGTACTCATCATTAGGGACATAATAAGC
AAGAAGAAGATGATTGA


>TTHERM_00663830(protein)
MGVPGYFSWIHRKYPYQVRKVRRNGRKKHIDCLYIDVNGICYQYARDEHQYNYLLKPKSL
ETIFKQVIDHIDSIIELVEPQLQVYLMLDGPCPRAKMNQQRQRRFHAEMHHLTLKDELKK
HGFDVKEETVPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGEADHKEHQVSYKK
LQFILSDSNAPGEGEHKILEVIRKHTNLQLTHCIVGADADLLLLSLATIGKRILILRENS
KFKGDKTDLEKELQKLKEELSHPQLDLHKEREYDLVDINGLKRVILDKYKKMFDNKQVQN
LKYNPMSLMDDFVFLSLFAGNDFLPRQNYMQIKSEKGHKPNILDKLIEKYDSYLETATSY
LSDRGFIKYNQIIEFFKQVATIEPKFKNNRIFEAPQKEEKSVFDYVKIMSQKQINNVEDI
KDQDLIDYDFKEEDLKLQQTSSVNEETEIPKDIIPISDSDEDQEEQKQSHDKEYHKKNKK
EQKKHHNQHDKDNQLASGTEDEQKKQKQNQEDDEEDEIQKILSDEMNGKEIYLKEKLKVT
NQQEYDLIIMKYLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLTQDVVEFLERNPKFEVK
FVKTQPFQPYKQLLAILHPDNEALLPAEFKGLFKKYLQPFCPQILDIDKYGATMEHMQII
KLPFIDVNVLEQAYQEGEKALEKSKNEYDKNRNIRSQDFIFEYDLNSSINIPVFNKLVHH
QIIEKANVHIIPFNHLDATLPDKITNLTVDMEKKNAERQQFEQKKKFKKQDRDDSEEQNQ
YEKKGKHHYKNDNQDENQEYSKHGHGHDSHKGHQQHGGHEGHHKNFHGTHHQGHNKQEED
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