Identifiers and Description

Gene Model Identifier

TTHERM_00686060

Standard Name

Aliases

PreTt18220 | 104.m00152 | 3732.m00065 | UBQ1

Description

zinc finger C3HC4 type (RING finger) protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00097 ) zinc finger, C3HC4 type (RING
  • ( PF08394 ) Archaeal TRASH domain

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_17392.1 6.99920276797163e-121
Description: hypothetical protein (187 aa)
Oxytricha Contig1781.0.g94 1.999981404597394e-31
Description: Zinc finger, C3HC4 type (RING finger)
DictyBase DDB_G0285333 5.998186291993296e-23
Description: DDB_G0285333 on chromosome: 4 position 3097865 to 3099004
WormBase WBGene00004381 9.000561397357242e-21
Description: locus:rnf-5 RING finger protein 5 status:Confirmed UniProt:Q09463 protein_id:CAA86745.1
Stentor Coeruleus SteCoe_13050 0.0000000000006914400106940203
Description: None
SGD YLR323C 0.000000100009565553302
Description: CWC24 Essential protein, component of a complex containing Cef1p; has similarity to S. pombe Cwf24p

General Information

No. Gene Name(s) Paragraph Text
123 (no standard gene name) The UBQ1 protein contains one domain. The domain (E-value=2.4E-11) is a zinc finger structure that binds two zinc cations and some DNA, RNA, or protein molecules. The closest homologs are in Paramecium tetraurelia strain d4-2, stylonychia lemnae, and oxytricha trifallax. UBQ1 may play an integral role in the ubiquitination pathway, which attaches ubiquitin to substrate proteins. The effect of ubiquitination may affect the substrate protein in various ways including: marking for degradation, altering location, changing protein activity, or promoting and preventing protein interactions.

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00686060(coding)
ATGTAGCATTAATAGCATGATGAAGAAGAATAAAAAAGCAGTGCAAGTGATATTCATGCT
TTGTTAGAGAAATTCGAATGCACAGTTTGTTTAGAAGTTGCAAAAGAACCTGTTGTCACA
GAATGCGGTCATTTATTTTGCTGGCCATGCATTTATAAGTGGTTGAATTAAAATAATGAG
TATTTAGTATGTCCAAATTGCAAAAATGGAATTAAAAAAGAACTAATAAGACCTCTTTAT
GCTCGTAATGAAGATGATACCCACCAAAAATAGAGAGATTCAAATATACCTAAAAGAGCA
TTACCTCCTCGTTAAATCCCTTAAAAAAATTAAAATCACCTTGGAGGAAGAGTCTCTTCA
GCAAATTTATCATTAGGAGTAAGCTTTGCAGGTTATGGATACTTCCCATCTTTGTATGGC
TTGTTAAATCAATATAAAAATAACATTACAGATCAGTTGGAGTCAAATGTTTCTCCGGAA
GTTGCAAAGCAACCGTTTTTAGAAAGATTCTTTTACATTTTGTGCATATTATGTATTTTA
TTTTTAGTTTTTTGTATGTGA


>TTHERM_00686060(gene)
ATGTAGCATTAATAGCATGATGAAGAAGAATAAAAAAGCAGTGCAAGTGATATTCATGCT
TTGTTAGAGAAATTCGAATGCACAGTTTGTTTAGAAGTTGCAAAAGAACCTGTTGTCACA
GAATGCGGTCATTTATTTTGGTAATATTATTTATCTAATACTATTGATTAAATATTTTAT
ATATTTATAAAATATAGCTGGCCATGCATTTATAAGGTAATTAAATGGAATAAATATAAA
GCATCATATTTGTATGGAAAGATAATAAAAATTTTAAATAAAAAGTGCATTAGATTAAAA
AATGTTTTATTTAAATGATTTGTAATTAATTTTTTGTATAATTTATAGTGGTTGAATTAA
AATAATGAGTATTTAGTATGTCCAAATTGCAAAAATGGAATTAAAAAAGAACTAATAAGA
CCTCTTTATGCTCGTAATGAAGATGATACCCACCAAAAATAGAGGTTAAATTTATTTAAA
AATCAGTTTAGAATAATATTTAATTTTAATATTCATAAAAAGAGATTCAAATATACCTAA
AAGAGCATTACCTCCTCGTTAAATCCCTTAAAAAAATTAAAATCACCTTGGAGGAGTAAA
CTTTATTCATAAATGAATATAAAATTCATTTTATTATTTAATTTATTGAAAAAGAGAGTC
TCTTCAGCAAATTTATCATTAGGAGTAAGCTTTGCAGGTTATGGATACTTCCCATCTTTG
TATGGCTTGTTAAATGTAAAAATTATACTTCTTGTATAAATTATTGATATTAACATTTTA
CTATTATAAAGCAATATAAAAATAACATTACAGATCAGTTGGAGTGTAAATTGTTTTAAT
ATTAAAATAATAAATTTATCATGTATAATTTAAAAATATAGCAAATGTTTCTCCGGAAGT
TGCAAAGCAACCGTTTTTAGAAAGATTCTTTTACATTTTGTGCATATTATGTATTTTATT
TTTAGTTTTTTGTATGTGA


>TTHERM_00686060(protein)
MQHQQHDEEEQKSSASDIHALLEKFECTVCLEVAKEPVVTECGHLFCWPCIYKWLNQNNE
YLVCPNCKNGIKKELIRPLYARNEDDTHQKQRDSNIPKRALPPRQIPQKNQNHLGGRVSS
ANLSLGVSFAGYGYFPSLYGLLNQYKNNITDQLESNVSPEVAKQPFLERFFYILCILCIL
FLVFCM