Identifiers and Description

Gene Model Identifier

TTHERM_00691350

Standard Name

RRM57 (RNA recognition motif-containing protein 57)

Aliases

PreTt02973 | 106.m00113 | 3674.m00026

Description

RRM57 predicted protein; polyadenylate-binding protein 2

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_08800.1 9.997329401607134e-86
Description: polyadenylate-binding protein 2 (610 aa)
WormBase WBGene00003902 0.00000000000020009182674645818
Description: locus:pab-1 status:Confirmed UniProt:Q9U302 protein_id:CAA21572.1
Oxytricha Contig21044.0.g17 0.00000000000020009182674645818
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD YER165W 0.00000000002000577768187062
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
DictyBase DDB_G0290745 0.0000000010002658722841845
Description: pabpc1B on chromosome: 5 position 4494408 to 4497035

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00691350(coding)
ATGTAGAAAAACTCCTCATAAAATTAGAGTACTACTCTTTTTATCCAATCACTCCATTAG
GATGTTACCAAGAATTTACTTTTCAAGTAGTTCAAGAAATTTGGTACTATCGAGTCATTG
AAGCACTTCCCTAAGAACAGAACAGCCTTAGTTGAATTCTAAACTCCTGAAGAAGCACAG
AATGCTAAGTAAAGCCTCAATTACATAAAGCTTCTTGGCAAGGAAATTAATATTATTAAT
TACTAAACTAAGGATGAACTTGAGCAAAAGAAAGATTATAACTTATTAATTCAAAATGTT
CCTTTAGATCTTGAAACCATTACTTTACACAATTTTATGACTAAGTATGGTGAAATAAGC
TCTCTATTACTTAAGAAGGACTAATTAAACTAGAATTTAGGTGATGGTTTTATTCAATTC
GAAACTAAAGAAGCATGCGATAAAATTTTGAAAGAACATGAGTAAAATGGTAAGATTTCT
CTTCCTAACTCTAATATCTCTTTCAATATCTAAAAAAACAACTAAATCAAGTAAAAAAAT
ACAAAAATCATGATTTATGGTTTATTCGAGCATGAAATCGCAGCTGATTAAAAGGAATCC
AAGACTTAATCAATCAATGCCATTTTCGAAGAAATTAAGAAAGACCTTTAAGTTGATTTT
AATTTCTATACTGAATACAACGAAAAAAAGAAGAATTTCTGGGCCAAGGTTGATTTTACA
TACGATGATGATTAGCAAAAAGAAGAGATTTGTAAGATTATTATAGAATAAGTTCAAAAG
AATTTCCATTACTCAGGAGATTAAAGCAAGGGACCTAAGATTGTTAGTTGA


>TTHERM_00691350(gene)
ATGTAGAAAAACTCCTCATAAAATTAGAGTACTACTCTTTTTATCCAATCACTCCATTAG
GATGTTACCAAGAATTTACTTTTCAAGTAGTTCAAGAAATTTGGTACTATCGAGTCATTG
AAGCACTTCCCTAAGAACAGAACAGCCTTAGTTGAATTCTAAACTCCTGAAGAAGCACAG
AATGCTAAGTAAAGCCTCAATTACATAAAGCTTCTTGGCAAGGAAATTAATATTATTAAT
TACTAAACTAAGGATGAACTTGAGCAAAAGAAAGATTATAACTTATTAATTCAAAATGTT
CCTTTAGATCTTGAAACCATTACTTTACACAATTTTATGACTAAGTATGGTGAAATAAGC
TCTCTATTACTTAAGAAGGACTAATTAAACTAGAATTTAGGTGATGGTTTTATTCAATTC
GAAACTAAAGAAGCATGCGATAAAATTTTGAAAGAACATGAGTAAAATGGTAAGATTTCT
CTTCCTAACTCTAATATCTCTTTCAATATCTAAAAAAACAACTAAATCAAGTAAAAAAAT
ACAAAAATCATGATTTATGGTTTATTCGAGCATGAAATCGCAGCTGATTAAAAGGAATCC
AAGACTTAATCAATCAATGCCATTTTCGAAGAAATTAAGAAAGACCTTTAAGTTGATTTT
AATTTCTATACTGAATACAACGAAAAAAAGAAGAATTTCTGGGCCAAGGTTGATTTTACA
TACGATGATGATTAGCAAAAAGAAGAGATTTGTAAGATTATTATAGAATAAGTTCAAAAG
AATTTCCATTACTCAGGAGATTAAAGCAAGGGACCTAAGATTGTTAGTTGA


>TTHERM_00691350(protein)
MQKNSSQNQSTTLFIQSLHQDVTKNLLFKQFKKFGTIESLKHFPKNRTALVEFQTPEEAQ
NAKQSLNYIKLLGKEINIINYQTKDELEQKKDYNLLIQNVPLDLETITLHNFMTKYGEIS
SLLLKKDQLNQNLGDGFIQFETKEACDKILKEHEQNGKISLPNSNISFNIQKNNQIKQKN
TKIMIYGLFEHEIAADQKESKTQSINAIFEEIKKDLQVDFNFYTEYNEKKKNFWAKVDFT
YDDDQQKEEICKIIIEQVQKNFHYSGDQSKGPKIVS