Identifiers and Description

Gene Model Identifier

TTHERM_00691500

Standard Name

RRP41 (exosome complex exonuclease RRP41)

Aliases

PreTt02988 | 106.m00175 | 3674.m00041

Description

RRP41 3-prime exoribonuclease family 1 protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• tRNA-intron endonuclease activity (IEA) | GO:0000213

Biological Process

• pollen-pistil interaction (IEA) | GO:0009875
• protein deglycosylation (IEA) | GO:0006517

Domains

• ( PF01138 ) 3' exoribonuclease family, domain 1
• ( PF02425 ) Paralytic/GBP/PSP peptide
• ( PF03725 ) 3' exoribonuclease family, domain 2
• ( TIGR01966 ) ribonuclease PH
• ( TIGR02065 ) exosome complex exonuclease 1

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_17594.1	9.99955252024689e-165
	Description: 3 exoribonuclease family, domain 1 containing protein (241 aa)
Oxytricha	Contig15304.0.g55	2.998863950472602e-38
	Description: 3 exoribonuclease family, domain 1
WormBase	WBGene00007201	9.99893167504554e-35
	Description: locus:exos-4.1 Putative exosome complex component RRP41 status:Confirmed UniProt:Q17533 protein_id:CAA97771.3
DictyBase	DDB_G0291328	1.0004572433669413e-23
	Description: DDB_G0291328 on chromosome: 6 position 128308 to 129151
Stentor Coeruleus	SteCoe_12747	2.1151310375910805e-19
	Description: None
SGD	YGR195W	2.99851380290819e-19
	Description: SKI6 Exosome non-catalytic core component; involved in 3-5 RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00691500(coding)
ATGAATTAAGATTTTTTAGTGTTGTAAGAGTTTAGAGAAGATGGTAGAAAAAAAAATGAG
CTGCGTAAAGTAGATTGCATATTAGGATTTGATTAAACTGTTGAAGGATCTTGTAAATTG
ATTTAAGGATTGACTGAAATAGTTTGCTTGATAAAGGGACCTCATAATAAATCAACTAGA
AGAGAATCAGAAGGATTTTTAAATGTTTAATATAATGTAGCCCCATTCAGTGGAACTGAT
AGAAGAAAAATTTCCAAATTCGATAAGGATTGGAACGAATTCACTGAAAATTTAAGAGTC
AGTTTTGAAAGTGTAATTCTAACAGAGCAATTAGGTTCAGGAGAAATTGATATTATAGTT
TCAGTTATTTAAGCTGATGGTAGTGCCAAAAGCTCAATTTTTAATGCCATTTCCTTAGCT
TTAATGGATGCAGGTATTCCAATGAAGGATTTCACTGTATCTTCAACAGTAATAAGCTTA
AACAGCGAAATTTTATTAGATGCAACATACTAGGAGTAAAAAAAAGCTAGTGCAGAATTG
ATAATATCTTATTTACCAAGAAGTGATTAGGTAGATTTTATGGAAATGAAATCAAGTAAA
ATAAGTTAATAAGATACTAAAGAGATGTGTAAAATTGCGGTTGATGGTTGTAAATAAATG
TATCAAATATTAAGAACTTTCGTTTTGGAAAGCTCAGTAAAAACTCTTTTGAGCACAAGA
TGA

>TTHERM_00691500(gene)
ATGAATTAAGATTTTTTAGTGTTGTAAGAGTTTAGAGAAGATGGTAGAAAAAAAAATGAG
CTGCGTAAAGTAGATTGCATATTAGGATTTGATTAAACTGTTGAAGGATCTTGTAAATTG
ATTTAAGGATTGACTGAAATAGTTTGCTTGATAAAGGGACCTCATAATGTATTTATTAAC
ATTATTAAATTTAGTTAAATAAAAATAATTCTATGAAATACAAAAGAAATCAACTAGAAG
AGAATCAGAAGGATTTTTAAATGTTTAATATAATGTAGCCCCATTCAGTGGAACTGATAG
AAGAAAAATTTCCAAATTCGATAAGTAATAAATAGTTTAAACTGCAGATGTTTTATCATT
TATATTATATAATAATGTAGGGATTGGAACGAATTCACTGAAAATTTAAGAGTCAGTTTT
GAAAGTGTAATTCTAACAGAGCAATTAGGTTCAGGAGAAATTGATATTATAGTTTCAGTT
ATTTAAGCTGATGGTAGTGCCAAAAGCTCAATTTTTAATGCCATTTCCTTAGCTTTAATG
GATGCAGGTATGCTTTTTTAATTAATAAACTTTTCTCAAATTTTAATCGAAATATTTGCA
TTAAATAAGGTATTCCAATGAAGGATTTCACTGTATCTTCAACAGTAATAAGCTTAAACA
GCGAAATTTTATTAGGTAAATTATATTCATGAAGTTTTAAAAGTAGTAAATAAAATATAT
AAAAAAGATGCAACATACTAGGAGTAAAAAAAAGCTAGTGCAGAATTGATAATATCTTAT
TTACCAAGAAGTGATTAGGTAGATTTTATGGAAATGAAATCAAGTAAAATAAGTTAATAA
GATACTAAAGAGATGTGTAAAATTGCGGTTGATGGTTGTAAATAAATGTATCAAATATTA
AGAACTTTCGTTTTGGAAAGCTCAGTAAAAACTCTTTTGAGCACAAGATGA

>TTHERM_00691500(protein)
MNQDFLVLQEFREDGRKKNELRKVDCILGFDQTVEGSCKLIQGLTEIVCLIKGPHNKSTR
RESEGFLNVQYNVAPFSGTDRRKISKFDKDWNEFTENLRVSFESVILTEQLGSGEIDIIV
SVIQADGSAKSSIFNAISLALMDAGIPMKDFTVSSTVISLNSEILLDATYQEQKKASAEL
IISYLPRSDQVDFMEMKSSKISQQDTKEMCKIAVDGCKQMYQILRTFVLESSVKTLLSTR