Identifiers and Description

Gene Model Identifier

TTHERM_00691500

Standard Name

RRP41 (exosome complex exonuclease RRP41)

Aliases

PreTt02988 | 106.m00175 | 3674.m00041

Description

RRP41 3-prime exoribonuclease family 1 protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Biological Process

Domains

  • ( PF01138 ) 3' exoribonuclease family, domain 1
  • ( PF02425 ) Paralytic/GBP/PSP peptide
  • ( PF03725 ) 3' exoribonuclease family, domain 2
  • ( TIGR01966 ) ribonuclease PH
  • ( TIGR02065 ) exosome complex exonuclease 1

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_17594.1 9.99955252024689e-165
Description: 3 exoribonuclease family, domain 1 containing protein (241 aa)
Tetrahymena borealis EI9_05330.1 9.99955252024689e-165
Description: ATPase, AAA family protein (1070 aa)
Oxytricha Contig15304.0.g55 2.998863950472602e-38
Description: 3 exoribonuclease family, domain 1
WormBase WBGene00007201 9.99893167504554e-35
Description: locus:exos-4.1 Putative exosome complex component RRP41 status:Confirmed UniProt:Q17533 protein_id:CAA97771.3
Tetrahymena borealis EI9_14703.1 9.99893167504554e-35
Description: SNF2 family domain-containing protein (1551 aa)
DictyBase DDB_G0291328 1.0004572433669413e-23
Description: DDB_G0291328 on chromosome: 6 position 128308 to 129151
Stentor Coeruleus SteCoe_12747 2.1151310375910805e-19
Description: None
SGD YGR195W 2.99851380290819e-19
Description: SKI6 Exosome non-catalytic core component; involved in 3-5 RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00691500(coding)
ATGAATTAAGATTTTTTAGTGTTGTAAGAGTTTAGAGAAGATGGTAGAAAAAAAAATGAG
CTGCGTAAAGTAGATTGCATATTAGGATTTGATTAAACTGTTGAAGGATCTTGTAAATTG
ATTTAAGGATTGACTGAAATAGTTTGCTTGATAAAGGGACCTCATAATAAATCAACTAGA
AGAGAATCAGAAGGATTTTTAAATGTTTAATATAATGTAGCCCCATTCAGTGGAACTGAT
AGAAGAAAAATTTCCAAATTCGATAAGGATTGGAACGAATTCACTGAAAATTTAAGAGTC
AGTTTTGAAAGTGTAATTCTAACAGAGCAATTAGGTTCAGGAGAAATTGATATTATAGTT
TCAGTTATTTAAGCTGATGGTAGTGCCAAAAGCTCAATTTTTAATGCCATTTCCTTAGCT
TTAATGGATGCAGGTATTCCAATGAAGGATTTCACTGTATCTTCAACAGTAATAAGCTTA
AACAGCGAAATTTTATTAGATGCAACATACTAGGAGTAAAAAAAAGCTAGTGCAGAATTG
ATAATATCTTATTTACCAAGAAGTGATTAGGTAGATTTTATGGAAATGAAATCAAGTAAA
ATAAGTTAATAAGATACTAAAGAGATGTGTAAAATTGCGGTTGATGGTTGTAAATAAATG
TATCAAATATTAAGAACTTTCGTTTTGGAAAGCTCAGTAAAAACTCTTTTGAGCACAAGA
TGA


>TTHERM_00691500(gene)
ATGAATTAAGATTTTTTAGTGTTGTAAGAGTTTAGAGAAGATGGTAGAAAAAAAAATGAG
CTGCGTAAAGTAGATTGCATATTAGGATTTGATTAAACTGTTGAAGGATCTTGTAAATTG
ATTTAAGGATTGACTGAAATAGTTTGCTTGATAAAGGGACCTCATAATGTATTTATTAAC
ATTATTAAATTTAGTTAAATAAAAATAATTCTATGAAATACAAAAGAAATCAACTAGAAG
AGAATCAGAAGGATTTTTAAATGTTTAATATAATGTAGCCCCATTCAGTGGAACTGATAG
AAGAAAAATTTCCAAATTCGATAAGTAATAAATAGTTTAAACTGCAGATGTTTTATCATT
TATATTATATAATAATGTAGGGATTGGAACGAATTCACTGAAAATTTAAGAGTCAGTTTT
GAAAGTGTAATTCTAACAGAGCAATTAGGTTCAGGAGAAATTGATATTATAGTTTCAGTT
ATTTAAGCTGATGGTAGTGCCAAAAGCTCAATTTTTAATGCCATTTCCTTAGCTTTAATG
GATGCAGGTATGCTTTTTTAATTAATAAACTTTTCTCAAATTTTAATCGAAATATTTGCA
TTAAATAAGGTATTCCAATGAAGGATTTCACTGTATCTTCAACAGTAATAAGCTTAAACA
GCGAAATTTTATTAGGTAAATTATATTCATGAAGTTTTAAAAGTAGTAAATAAAATATAT
AAAAAAGATGCAACATACTAGGAGTAAAAAAAAGCTAGTGCAGAATTGATAATATCTTAT
TTACCAAGAAGTGATTAGGTAGATTTTATGGAAATGAAATCAAGTAAAATAAGTTAATAA
GATACTAAAGAGATGTGTAAAATTGCGGTTGATGGTTGTAAATAAATGTATCAAATATTA
AGAACTTTCGTTTTGGAAAGCTCAGTAAAAACTCTTTTGAGCACAAGATGA


>TTHERM_00691500(protein)
MNQDFLVLQEFREDGRKKNELRKVDCILGFDQTVEGSCKLIQGLTEIVCLIKGPHNKSTR
RESEGFLNVQYNVAPFSGTDRRKISKFDKDWNEFTENLRVSFESVILTEQLGSGEIDIIV
SVIQADGSAKSSIFNAISLALMDAGIPMKDFTVSSTVISLNSEILLDATYQEQKKASAEL
IISYLPRSDQVDFMEMKSSKISQQDTKEMCKIAVDGCKQMYQILRTFVLESSVKTLLSTR