Identifiers and Description

Gene Model Identifier

TTHERM_00756450

Standard Name

RRM48 (RNA recognition motif-containing protein 48)

Aliases

PreTt18308 | 123.m00127 | 3742.m00057

Description

RRM48 RNA-binding protein 42 (RBM42)-like RNA recognition motif protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF05172 ) MPPN (rrm-like) domain
  • ( PF07491 ) Protein phosphatase inhibitor
  • ( TIGR00166 ) ribosomal protein S6
  • ( TIGR01622 ) splicing factor, CC1-like family
  • ( TIGR01628 ) polyadenylate binding protein, human types

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_15406.1 9.997093137033517e-262
Description: RNA binding protein (445 aa)
Oxytricha Contig7157.0.g23 9.999888128184441e-42
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
DictyBase DDB_G0289941 2.9998215087698487e-30
Description: DDB_G0289941 on chromosome: 5 position 3478416 to 3479861
SGD YOL041C 7.003307964816097e-28
Description: NOP12 Nucleolar protein involved in pre-25S rRNA processing and biogenesis of large 60S ribosomal subunit; contains an RNA recognition motif (RRM); binds to Ebp2; similar to Nop13p and Nsr1p
WormBase WBGene00008688 1.999790113608142e-24
Description: status:Confirmed UniProt:Q95QL3 protein_id:CAC70081.1
Stentor Coeruleus SteCoe_26182 2.6102790696677047e-23
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00756450(coding)
ATGAGCGGAACTTTAGGATATTTATTATAGCAAAGTGCTTAAAATCAAGGAAAAAAATCC
AATGAAAAGACAAACAGCAAGGCTGTTTCAGAAGTTGCCGATTTATTTTCTAAGGAAAAG
ACTGTTTTAGCTGAACCAGTTATTGTAGAAGCTATCATTAATCCTGAAAATGAAGAAAAT
GAGGAAAATAATCCTTTCATTGATGAAAATATGACTGCAAAATAGAAAAAAGAAAAGGAT
GATAGAACTGTTTTTGTTGGTAACATCTCCTTAGAAGCTACTGGTAGTTAAATTGCTAAA
GAGTTTAAACAATACGGAAAAATTGAAAAGATTTGGATTAGATCAGTCCCAGTTGAAAAC
TCAAAAATGCCTAAAAGAGCTAGTGTTATCCTCAAAAAGTTTAAGGATGGTGCTGATAGA
AAGAATGCTTACATTCTATTTTCTACATAAGAAGAAGCTGAAAAGTCACTTGAAGCTAAT
GGAAAGGTATTTTTGGAAAAGCACTTGAGAGTAGATAAAGCAAATGAAAAAATATTGGAT
TACACCAGAACTATATTTGTTGGTAACTTGCACTTTAAGATTTCTGAAGAATAGCTTAGA
CATCATTTTGAAAGCTGTGGTGATATCTTGAACGTAAGAGTTATCAGAGATCCTAAAACT
CATGAAGGAAAAGGATTTGGTTATGTTTTCTTTAAGGAAAAGACTGGATTCTAAAATGCT
TTAGAAAAAAATGGAACTAAACTCCTTGAAAGAGAAATTAGAGTTAAAAAAGCCGTCCCT
GCAGAGAGACTTGAAAAGAAAAAAGTTAGAAAAGCTGAAAAGGCTAACATTATAAATAAG
GAACATGCTATTTAAAGATTAAAAAGTAAATTGAAAGGTAAAGCCGTTGTTCATGACCAA
GATGATTCCGATGATGAGTAAGAATAGCCTAAGGTTAAAAAAGTAAAGAAGGGTATTCAA
AAAAACGACACTATTCCTACAAAGAACTTTGAAAAGAATATGAAGACAACTAACTTTAAA
GAAAACGAAAATGAAATTTTCGACTTTAAAAATGAAATGTCTATTGCTCCTAGAGTCTTG
AGAAAGAAAATTAAAAAACTTAGCAAAAAGGGAATTGAATCAACTGAAGCTTTTTCAAAG
GTTTAGCAACTTAAGAAAAATAAAAAGATTAGCAACGATAAAAATATCTTTAATTCTAAA
TTCACTCTTTAAGCTAGAAAAGATAAAAGATTCAAAAAAGCCATGCAAAATAAGAAAAAA
GGTAAATTAGAAGTAAAGAAAGAAGATAGAAAAGACAAAAAGAAAAAAACAACAACAGCA
GCAGCCTCCACAGCTAAGAAATAAACTAATTAATGA


>TTHERM_00756450(gene)
ATGAGCGGAACTTTAGGATATTTATTATAGCAAAGTGCTTAAAATCAAGGAAAAAAATCC
AATGAAAAGACAAACAGCAAGGCTGTTTCAGAAGTTGCCGATTTATTTTCTAAGGAAAAG
ACTGTTTTAGCTGAACCAGTTATTGTAGAAGCTATCATTAATCCTGAAAATGTAATTATT
TTGATACTCCTACAATTAAATAAAATCAATTTAAAAATCTAAATTATTCTGTTTTTTTAT
TTAGGAAGAAAATGAGGAAAATAATCCTTTCATTGATGAAAATATGACTGCAAAATAGAA
AAAAGAAAAGGATGATAGAACTGTTTTTGTTGGTAACATCTCCTTAGAAGCTACTGGTAG
TTAAATTGCTAAAGAGTTTAAACAATACGGAAAAGTAAAATAAAAATATGAAATTACAAT
ATATAAAAAAATTATTTTTTAATAGATTGAAAAGATTTGGATTAGATCAGTCCCAGTTGA
AAACTCAAAAATGCCTAAAAGAGCTAGTGTTATCCTCAAAAAGGTAATTTATAAAATAGC
AAATTAAAAATTATTTTAGGCGTATTCAACTTACTATTTACAAATTCTTAAAAGTTTAAG
GATGGTGCTGATAGAAAGAATGCTTACATTCTATTTTCTACATAAGAAGAAGCTGAAAAG
TCACTTGAAGCTAATGGAAAGGTATTTTTGGAAAAGCACTTGAGAGTAGATAAAGCAAAT
GAAAAAATAGTAAATAGATATAATACTTATTAATAGCAATATAAATAATATTATAATTAT
TAAAATACAAGTTGGATTACACCAGAACTATATTTGTTGGTAACTTGCACTTTAAGATTT
CTGAAGAATAGCTTAGACATCATTTTGAAAGCTGTGGTGATATCTTGAACGTAAGAGTTA
TCAGAGATCCTAAAACTCATGAAGGAAAAGGATTTGGTTATGTTTTCTTTAAGGAAAAGA
CTGGATTCTAAAATGCTTTAGAAAAAAATGGAACTAAACTCCTTGAAAGAGAAATTAGAG
TTAAAAAAGCCGTCCCTGCAGAGAGACTTGAAAAGAAAAAAGTTAGAAAAGCTGAAAAGG
CTAACATTATAAATAAGGAACATGCTATTTAAAGATTAAAAAGTAAATTGAAAGGTAAAG
CCGTTGTTCATGACCAAGATGATTCCGATGATGAGTAAGAATAGCCTAAGGTTAAAAAAG
TAAAGAAGGGTATTCAAAAAAACGACACTATTCCTACAAAGAACTTTGAAAAGAATATGA
AGACAACTAACTTTAAAGAAAACGAAAATGAAGTACTTACTAAATTTAATTTATTGCCAA
GTATAATACAAATAAAAAATTATAAAAAAATAGATTTTCGACTTTAAAAATGAAATGTCT
ATTGCTCCTAGAGTCTTGAGAAAGAAAATTAAAAAACTTAGCAAAAAGGTATTATAAATA
TTGAATTTTAAATTGAGAAAATTAATTTTTATTTATAATAAATTAGGGAATTGAATCAAC
TGAAGCTTTTTCAAAGGTTTAGCAACTTAAGAAAAATAAAAAGATTAGCAACGATAAAAA
TATCTTTAATTCTAAATTCACTCTTTAAGCTAGAAAAGTAATTAATTCGCTTAAATTTTT
ATTGATAAATATAATAATAATATTTTACTCGTAATTTAAAACAGGATAAAAGATTCAAAA
AAGCCATGCAAAATAAGAAAAAAGGTAAATTAGAAGTAAAGAAAGAAGATAGAAAAGACA
AAAAGAAAAAAACAACAACAGCAGCAGCCTCCACAGCTAAGAAATAAACTAATTAATGA


>TTHERM_00756450(protein)
MSGTLGYLLQQSAQNQGKKSNEKTNSKAVSEVADLFSKEKTVLAEPVIVEAIINPENEEN
EENNPFIDENMTAKQKKEKDDRTVFVGNISLEATGSQIAKEFKQYGKIEKIWIRSVPVEN
SKMPKRASVILKKFKDGADRKNAYILFSTQEEAEKSLEANGKVFLEKHLRVDKANEKILD
YTRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKEKTGFQNA
LEKNGTKLLEREIRVKKAVPAERLEKKKVRKAEKANIINKEHAIQRLKSKLKGKAVVHDQ
DDSDDEQEQPKVKKVKKGIQKNDTIPTKNFEKNMKTTNFKENENEIFDFKNEMSIAPRVL
RKKIKKLSKKGIESTEAFSKVQQLKKNKKISNDKNIFNSKFTLQARKDKRFKKAMQNKKK
GKLEVKKEDRKDKKKKTTTAAASTAKKQTNQ