Identifiers and Description

Gene Model Identifier

TTHERM_01014700

Standard Name

THD4 (Tetrahymena histone deacetylase 4)

Aliases

PreTt04600 | 197.m00074 | 3748.m00310

Description

THD4 histone deacetylasehistone-like deacetylase family classII protein; Histone deacetylase family protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_20223.1 9.997093137033517e-262
Description: histone deacetylase (555 aa)
Oxytricha Contig2098.0.g3 8.999979922762958e-79
Description: Histone deacetylase domain
SGD YNL021W 4.000904604388404e-59
Description: HDA1 Putative catalytic subunit of a class II histone deacetylase complex that also contains Hda2p and Hda3p; Hda1p interacts with the Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation
WormBase WBGene00018319 2.000065869309806e-55
Description: locus:hda-6 Histone deacetylase 6 status:Confirmed UniProt:Q20296 protein_id:CCD71098.1
DictyBase DDB_G0280195 1.9998323414791308e-36
Description: hdaC on chromosome: 3 position 3087742 to 3093065
Stentor Coeruleus SteCoe_35833 1.462486227251231e-31
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82

Sequences 

>TTHERM_01014700(coding)
ATGATGGATGCCAAGGATAAAAAAGTAGGATTTATATATGATGAAAGAATGCTTTTACAT
AAACTCTCTAAGTAGCCTCCTCATCCTGAGTGCCCTGAAAGAATAGAAAAAATAATAGAA
AACTTAAAAAAAACTGGATTATGGAGTTAATTAGATGTAATTAACTAGGTAGAGCCAATT
TAAAAAGATATTTTAAATAAAGTGCACAGAGATTCATATGTAGATTTAGTAGAATAAATG
TGGCCTGAAGGCTGTGAAAAAGAAAACATGGTTTTAAATGGATGTTATTATAATAAGTAC
ACAGGATAAAGTGCTTTTTTGTCATCAGGTGCTGTAATTTAATCAATAGATTTGATCAAA
TCCAAATCTTGGCATACTGCTTTTTGTTGTGTTAGACCGCCTGGACATCACAGTGGAGCT
TCATAGTAGTGTAGTGGATTTTGTTTCTTTAACAATGTTGTTGTGGGAGCCAAGTATTTA
AGAGAAAAATATTCAGTCAAAAAAATAGCAATTTTCGATTTTGATGTACATCATGGAGAC
GGAACTCAAGCTCTTACATACGATGATCATGAATTGTTATTTATAAGTATACATTAGTAT
GATGAAGGAAAATTTTATCCTTTCTAAAGTGGAGATTTAAGTAAAGTAGGAAATGGATTT
AACATTAATATTGGTTGGAACACTTCAAATTTTTAAAGTGCTGGAGATGATGAATACATT
TATGCTTTTGAATCAATTGTAATGCCAGCATTGACTGAATTTTAGCCAGATTTTATATTT
ATTTCTGCCGGATTTGATTCAGCAGCTAACGATAAACTAGGTAGGTGCTAATTGACAAAT
ATAGGATACGAATATATGAGTTCAAGACTAGTATAAATATTTCCTAATTTATTGTTTGTT
TTAGAAGGTGGATATAACCTTGATAGCATATAATGGGCATCAGAAGCTGTTATTAGGAGA
ATTTTGGATCCTTTAAACGAAAAATAACTTGAAAGTTTGAGAAATAACATACTGCCAAAC
TAGATGTCAATAAAAGTAATTAATGAATGTAAGCTGGCTCATAATAAATTTTGGAAATTA
CAAGACAAATACAACATTACAAACATCATAGAAAAAAATTAATTTTTTGGAAAAAGTATA
ATATCAGATTTTAGTAAAAACTTTAAGATAGACAACTTCAATGATAAATTATATTACACT
TTAAATTAAATTGAGATTTAATATTTAGAGAAACCTGAGTTTAGGTAGCTACTTTGGCAT
GGAAATTAAATGAAATAGTTTGGAAATGAAATGCTATTTGAAATTTAAAAAAGTATTGAT
GTGGGTTTTGAGATAAAGATAGTAGGTGAGGATAGTATTATCATAAAAGGAATAAAAACA
AAAGATTTTGAAAATAGATAATTAGATGTAATAAATTAAACAATTCAATATCAATAAAAG
GTTTTTGAACATTTTACAGAATAATTAAAAGAAAAAAAACAAATTATTTATGATTCTATT
AAAAACTAATTAAAAGAAATTTCAAATATTCCAATAAATTCACAGCTAATAATTGATGGA
AGTAATTGCTAAGTGATAATCTCGCACATACCAAACAACAATAGCAATCTGATAAATATC
TAATAAATTTGTGAATAATTATCCTCTTATTTCTATGATTAGGAGAAAAAGTGA


>TTHERM_01014700(gene)
ATGATGGATGCCAAGGATAAAAAAGTAGGATTTATATATGATGAAAGAATGCTTTTACAT
AAACTCTCTAAGTAGCCTCCTCATCCTGAGTGCCCTGAAAGAATAGAAAAAATAATAGAA
AACTTAAAAAAAACTGGATTATGGAGTTAATTAGATGTAATTAACTAGGTAGAGCCAATT
TAAAAAGATATTTTAAATAAAGTGCACAGAGATTCATATGTAGATTTAGTAGAATGTAAT
TAGTTGTAGCTATTTGATTAGATCTTCTTTTTTCTTTTAGATTAATAAATCATTTCAAAA
TGCTGCTTTAATTATTTATATTAACTCCTACTTAATCATTTTATATAATATTTTATTTTT
TAATTAGAAATGTGGCCTGAAGGCTGTGAAAAAGAAAACATGGTTTTAAATGGATGTTAT
TATAATAAGTACACAGGATAAAGTGCTTTTTTGTCATCAGGTGCTGTAATTTAATCAATA
GATTTGATCAAATCCAAATCTTGGCATACTGCTTTTTGTTGTGTTAGGTTTAATATTTAT
TTTTTTATATTGAAAATAATTGGGATTTGATTTATAATTTAAAATTTGAAATTAAAATTA
AGACCGCCTGGACATCACAGTGGAGCTTCATAGTAGTGTAGTGGATTTTGTTTCTTTAAC
AATGTTGTTGTGGGAGCCAAGTATTTAAGAGAAAAATATTCAGTCAAAAAAATAGCAATT
TTCGATTTTGATGTACATCATGGAGACGGAACTCAAGCTCTTACATACGATGATCATGAA
TTGTTATTTATAAGTATACATTAGTATGATGAAGGTATTTATTATGAGATAAATCTAACA
AATTAAATTTGCATTATTTATAAATATATAGGAAAATTTTATCCTTTCTAAAGTGGAGAT
TTAAGTAAAGTAGGAAATGGATTTAACATTAATATTGGTTGGAACACTTCAAATTTTTAA
AGTGCTGGAGATGATGAATACATTTATGCTTTTGAATCAATTGTAATGCCAGCATTGACT
GAATTTTAGCCAGATTTTATATTTATTTCTGCCGGATTTGATTCAGCAGCTAACGATAAA
CTAGGTAGGTGCTAATTGACAAATATAGGATACGAGTAAAATTTAAACAAAAGTCTATTT
TTACTTTAAATAATTATATTTATTATTATTTATAGATATATGAGTTCAAGACTAGTATAA
ATATTTCCTAATTTATTGTTTGTTTTAGAAGGTGGATATAACCTTGATAGCATATAATGG
GCATCAGAAGCTGTTATTAGGAGAATTTTGGATCCTTTAAACGAAAAATAACTTGAAAGT
TTGAGAAATAACATACTGCCAAACTAGATGTCAATAAAAGTAATTAATGAATGTAAGCTG
GCTCATAATAAATTTTGGAAATTACAAGACAAATACAACATTACAAACATCATAGAAAAA
AATTAATTTTTTGGAAAAAGTATAATATCAGATTTTAGTAAAAACTTTAAGATAGACAAC
TTCAATGATAAATTATATTACACTTTAAATTAAATTGAGATTTAATATTTAGAGAAACCT
GAGTTTAGGTAGCTACTTTGGCATGGAAATTAAATGAAATAGTTTGGAAATGAAATGCTA
TTTGAAATTTAAAAAAGTATTGATGTGGGTTTTGAGATAAAGATAGTAGGTGAGGATAGT
ATTATCATAAAAGGAATAAAAACAAAAGATTTTGAAAATAGATAATTAGATGTAATAAAT
TAAACAATTCAATATCAATAAAAGGTTTTTGAACATTTTACAGAATAATTAAAAGAAAAA
AAACAAATTATTTATGATTCTATTAAAAACTAATTAAAAGAAATTTCAAATATTCCAATA
AATTCACAGCTAATAATTGATGGAAGTAATTGCTAAGTGATAATCTCGCACATACCAAAC
AACAATAGCAATCTGATAAATATCTAATAAATTTGTGAATAATTATCCTCTTATTTCTAT
GATTAGGAGAAAAAGTGA


>TTHERM_01014700(protein)
MMDAKDKKVGFIYDERMLLHKLSKQPPHPECPERIEKIIENLKKTGLWSQLDVINQVEPI
QKDILNKVHRDSYVDLVEQMWPEGCEKENMVLNGCYYNKYTGQSAFLSSGAVIQSIDLIK
SKSWHTAFCCVRPPGHHSGASQQCSGFCFFNNVVVGAKYLREKYSVKKIAIFDFDVHHGD
GTQALTYDDHELLFISIHQYDEGKFYPFQSGDLSKVGNGFNINIGWNTSNFQSAGDDEYI
YAFESIVMPALTEFQPDFIFISAGFDSAANDKLGRCQLTNIGYEYMSSRLVQIFPNLLFV
LEGGYNLDSIQWASEAVIRRILDPLNEKQLESLRNNILPNQMSIKVINECKLAHNKFWKL
QDKYNITNIIEKNQFFGKSIISDFSKNFKIDNFNDKLYYTLNQIEIQYLEKPEFRQLLWH
GNQMKQFGNEMLFEIQKSIDVGFEIKIVGEDSIIIKGIKTKDFENRQLDVINQTIQYQQK
VFEHFTEQLKEKKQIIYDSIKNQLKEISNIPINSQLIIDGSNCQVIISHIPNNNSNLINI
QQICEQLSSYFYDQEKK