Identifiers and Description

Gene Model Identifier

TTHERM_01043090

Standard Name

RPS27 (Ribosomal Protein of the Small subunit 27)

Aliases

PreTt03242 | 208.m00035 | 3807.m00208

Description

RPS27 40S ribosomal protein S27; Homolog of yeast RPS27- human RPS27;

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• asparagine metabolic process (IEA) | GO:0006528
• negative regulation of biosynthetic process (IEA) | GO:0009890
• pyrimidine ribonucleotide catabolic process (IEA) | GO:0009222

Domains

No Data fetched for Domains

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_20149.1	4.999934616708877e-52
	Description: ribosomal protein S27 (82 aa)
SGD	YKL156W	5.997739233660418e-28
	Description: RPS27A Protein component of the small (40S) ribosomal subunit; nearly identical to Rps27Bp and has similarity to rat S27 ribosomal protein
DictyBase	DDB_G0277635	9.997975313387782e-28
	Description: rps27 on chromosome: 2 position 8305176 to 8306165
WormBase	WBGene00004496	1.0004572433669413e-23
	Description: locus:rps-27 40S ribosomal protein S27 status:Confirmed UniProt:Q9TXP0 protein_id:CCD71974.1
Oxytricha	Contig4448.0.g28	9.998720540547892e-23
	Description: Ribosomal protein S27

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_01043090(coding)
ATGGAAAGAGATCTTTTAAACCCCATCTACGAAGAAGAAAAGCAAAAGAATAAGTTCAAG
AGACTTATCCAAGCTCCCAACTCTTACTTCATGGATGTTAAGTGTGCTCAATGCCAAAAC
ATCCAAATGATTTTCTCTAACGCTCAATCTACCATTATTTGTGAAAAGTGCTCTGCTATC
CTCTGCAAGCCCACTGGTGGTAAGGTTCAAATCTAAGCTGGTTGCGCCTTCAAGATTAAA
AACTGA

>TTHERM_01043090(gene)
ATGGAAAGAGATCTTTTAAACCCCATCTACGAAGAAGAAAAGCAAAAGAATAAGTTCAAG
AGACTTATCCAAGCTCCCAACTCTTACTTCATGGATGTTAAGTGTGCTCAATGCCAAAAC
ATCCAAATGATTTTCTCTAACGCTCAATCTACCATTATTTGTGAAAAGTAATTCACTCAA
GCATTCATTATTTTCATTAAAAAATAGTTTTGACTCAATCAAGCTCCAAATCAAATAAAT
AAAATGAATTTGGACAAAAGCTGCTTCCTCAATTTCAAGAGAAACTTAAAATAATTTTAA
TGTATTTTCAATAGCTAGCTAGCTTGCAATCGTTATCTCAAATTTACAAATAAATAGGAT
AACAAACAAACAATCAAAATAAACAAACCAATATTTTACACAATCAAATTTTTGTGAATG
TTGCAGAAAGTTACCAAACTGAGGCTATTATTTAAAATTTTAGGGATATTTAGTTTTGTT
TACATCCAGATGTATAGTAGCTTATTAATATAAAGCGTTCTAAAATTTAGAAATGCAAAA
CATTCTCTAATTTTATTCGAATTTTTAACTCTTTGCAATCGATTTTAAGTATCTAAATTT
ATAATTATTAAAAATTAAATAGGTGCTCTGCTATCCTCTGCAAGCCCACTGGTGGTAAGG
TTCAAATCTAAGCTGGTTGCGCCTTCAAGATTAAAAACTGA

>TTHERM_01043090(protein)
MERDLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTIICEKCSAI
LCKPTGGKVQIQAGCAFKIKN