Identifiers and Description

Gene Model Identifier

TTHERM_01122740

Standard Name

RRP64 (exosome component RRP6-4)

Aliases

PreTt24593 | 243.m00042

Description

RRP64 3-prime-5-prime exonuclease

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• detection of virus (IEA) | GO:0009597
• protein import into peroxisome matrix, receptor recycling (IEA) | GO:0016562
• protein phosphorylation (IEA) | GO:0006468

Domains

• ( PF00570 ) HRDC domain
• ( PF01612 ) 3'-5' exonuclease
• ( PF08066 ) PMC2NT (NUC016) domain
• ( TIGR00377 ) anti-anti-sigma factor
• ( TIGR01388 ) ribonuclease D

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10594.1	9.997093137033517e-262
	Description: 3-5 exonuclease (879 aa)
DictyBase	DDB_G0271572	2.000383902553626e-98
	Description: exosc10 on chromosome: 2 position 601251 to 605014
Oxytricha	Contig14024.0.g55	5.001102406662288e-90
	Description: 3-5 exonuclease
SGD	YOR001W	1.9996609186508915e-82
	Description: RRP6 Nuclear exosome exonuclease component; has 3-5 exonuclease activity; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay
WormBase	WBGene00000796	4.000989088096131e-71
	Description: locus:crn-3 status:Confirmed UniProt:G5EBX6 protein_id:CAA90108.1
Stentor Coeruleus	SteCoe_9214	8.194012623990515e-40
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01122740(coding)
ATGGCTAGCAATAATAAAATTAAGGATTTAGATGAAATTCTTAACTAAAAGGATTTCATG
AAGTAGGTTTTGTAGAAAGATGCAAGTCTTGTTCGTTTGAGTAACTCTCTTCCATAAAAT
GATGAAATGAAGTTTTACATGAACAATGAGCAACTAAAATAAAAGCAAAAGGCTATCAAT
GTTAAAATTCTCCACCAGTTAAAGAAAATAGCATCATTTATATAATTTGAGCAAGCTTCT
AGCATTGACTTAAACCATTTTAGCCATATCATAGACATGAATGATCTACTTTTTGAGAAT
ATCGACACTTCATTGGACAAAATTAAAAAAATTAATAATGTCACTGAGTCTTCTCTTTTC
GATCCTTCTAAGACTATATCCTCTGACAAGGGCTTCAAGCCTATTAGTGGGGAGGAATCC
GAAGACATAATCACAATAGCAACAAAAGAAAAACCTTAAAACCATTTTAAAGATTGCATT
GATAATTCAATAGAACATCCTTTCATTCCTGTCATCAAAGAAAAGCTAAATGCAGATGTT
CCATTAGATGATGTCATAGTTTAAGTATAGAGAGAGGGAGCTGAAAGCTTTTTTAAAACC
ATTTAAGACCCTTTATAATATGAATTTCCCCACCCTTATGCTTATGAAATTGAGAATTTC
AATTTCTCAGAGTAACAATTACAGACAGATAATATAATAGTTTAGGAGCCTATTAGTCTT
AAAGAGGAGTTAGTGTTTGTAGATAAAGAAGATATTTTAGACGAAATGATAGAGTCTCTG
AAGTAATGTAGCGAAGTAGCTATTGATTTAGAACACCATTCATATCGTTCATTCAACGGT
ATTACTTGCTTGATGCAGATTTCTAGCAGAACTAAAGACTACATTGTGGATGTCTTCAGT
GTATGGAAATCTCTACATAAGCTTAATGCAGTTACTACAGATAAAAATATTGTTAAAGTT
CTTCATGGTGCAGATATGGATATTCAATGGTTACAAAGAGATTTTGGAATTTATATTGTT
AATTTATTCGATACCGGATAAGCAGCCAGAACTTTATCTATGCCCAGCTATGCATTAGCT
TATCTTTTATAATCTATTTCAAAAGTACCCACAGATAAAAAGTACCAATTAGCTGATTGG
AGAATCCGTCCTCTCCCAAGAGAAATGATAAGTTATGCTAGATCAGATACACACTATTTG
TTATCAATTTATGACAATTTAAGAATTCAACTTGTAAGCAAAGCACTTTAGTAAGGATAA
AATGCTTCTCACTTTATTGAGAGTGTTCTGAATAAGTCTAGAGCTATTTGCCTCAAAAAG
TATGTCAAGCCAATTTTAGATGATGAAAAATATCACTCAATTTTACAAAATTAACGTATC
ATCTTATCTGACAGAAAGTTCCGCATTTTAAAAAGACTCCTCGAATGGAGATATAAAATG
GCTGCTAAATATGATGAAAATCCTACCTTTGTTTTAGCTAATGATATTCTTTTCAATATT
GTAAATAGACTACCCTAAACTCAGAAAGAGTTTGCATCTTCAAATCTTAAGCTTAGTTAC
GTATGCCAATATCATGCAAACGAAATTCTTTCTATTATTAAGGAAGAAATTGAATCTGAA
CAAAAGTCTAAATCTGGAGAATCAGAGAGTGCCACCAAAAATTAAAGTGAAATGGAAACT
GAAGATCTGATTTATGCCTCTCGTAACCATAATAATAACATATCAGGATACTAAATAATT
AACACTCAGAGTCACCAAATGGAGTAGGAGCTTGAAGATGAAGAGGTTTCCTTCAAATTT
GAAGTAATTGATGTATAAATTGGGGTGTATTAAGGCAATTTGAATATTTTAGAAGACCAC
ATACTATCATCTTCAACCTCTGCTGAAATATAATCAAAAATAGATAAAATTAATTCTTCT
TTCTTCTATGCAGATCCTGTAGATTTTTATTGCGAAAAATACCCTTTTATGAGAGAAGCT
TATGAACTCGCTAAATTGCAAGAAGAAGAAATTATGAAAAAAAGAAATGACCTGGCCTAC
ATTTAGAGTAAAAACCCATTTGAAGGTGAAAACGAAGGACAAACTAACAAGGAAGAAGAA
GAAAGAGATATTTATTTAGCATTTGATAAGGAAAAAGGACCTTCTTCTAAACCAAAAGAA
GTTGAACAAATAAATGTGCCTGATTTACCTCAATCTTATGAAGATTAGTTTAAAACAAGT
CTCAAAAAGAGAAAATATAATTTTGGCAATGAAGCAAAAAGAAACAACAACTAAGATGAA
GAGGGAGAAGAAGATAATGAAAATGGAGAAAAAATTTACAAAAAAAGATCTACTGGATAA
AAAAGTACATTCGATATGTTAATAGAGTAAGGTCTCAGAGAACAAACTGACTCTGAAGAA
TCAGATTCTGAAGAAGGTGAATAATAGTAGAAGAAGAAAAAAAGAGAGGTTACAGAAGAA
GAAAAAAAACAAATCGAAGATAATTTTAACCAGTTTGCAGATAAAATAAGAAATAGAATC
AATAAAGATCCTAAGTTTAAATCTGGTATCAATGCATAAAAAAAATTCAACAGTAGCAAT
AATAAAAAGGGTGGTAATAAAAAAAATAATAAGTTTATAAGCAAGTTCAACAAAAGCGGA
TTTTGA

>TTHERM_01122740(gene)
ATGGCTAGCAATAATAAAATTAAGGATTTAGATGAAATTCTTAACTAAAAGGATTTCATG
AAGTAGGTTTTGTAGAAAGATGCAAGTCTTGTTCGTTTGAGTAACTCTCTTCCATAAAAT
GATGAAATGAAGTTTTACATGAACAATGAGCAACTAAAATAAAAGCAAAAGGCTATCAAT
GTTAAAATTCTCCACCAGTTAAAGAAAATAGCATCATTTATATAATTTGAGCAAGCTTCT
AGCATTGACTTAAACCATTTTAGCCATATCATAGACATGAATGATCTACTTTTTGAGAAT
ATCGACACTTCATTGGACAAAATTAAAAAAATTAATAATGTCACTGAGTCTTCTCTTTTC
GATCCTTCTAAGACTATATCCTCTGACAAGGGCTTCAAGCCTATTAGTGGGGAGGAATCC
GAAGACATAATCACAATAGCAACAAAAGAAAAACCTTAAAACCATTTTAAAGATTGCATT
GATAATTCAATAGAACATCCTTTCATTCCTGTCATCAAAGAAAAGCTAAATGCAGATGTT
CCATTAGATGATGTCATAGTTTAAGTATAGAGAGAGGGAGCTGAAAGCTTTTTTAAAACC
ATTTAAGACCCTTTATAATATGAATTTCCCCACCCTTATGCTTATGAAATTGAGAATTTC
AATTTCTCAGAGTAACAATTACAGACAGATAATATAATAGTTTAGGAGCCTATTAGTCTT
AAAGAGGAGTTAGTGTTTGTAGATAAAGAAGATATTTTAGACGAAATGATAGAGTCTCTG
AAGTAATGTAGCGAAGTAGCTATTGATTTAGAACACCATTCATATCGTTCATTCAACGGT
ATTACTTGCTTGATGCAGATTTCTAGCAGAACTAAAGACTACATTGTGGATGTCTTCAGT
GTATGGAAATCTCTACATAAGCTTAATGCAGTTACTACAGATAAAAATATTGTTAAAGTT
CTTCATGGTGCAGATATGGATATTCAATGGTTACAAAGAGATTTTGGAATTTATATTGTT
AATTTATTCGATACCGGATAAGCAGCCAGAACTTTATCTATGCCCAGCTATGCATTAGCT
TATCTTTTATAATCTATTTCAAAAGTACCCACAGATAAAAAGTACCAATTAGCTGATTGG
AGAATCCGTCCTCTCCCAAGAGAAATGATAAGTTATGCTAGATCAGATACACACTATTTG
TTATCAATTTATGACAATTTAAGAATTCAACTTGTAAGCAAAGCACTTTAGTAAGGATAA
AATGCTTCTCACTTTATTGAGAGTGTTCTGAATAAGTCTAGAGCTATTTGCCTCAAAAAG
TATGTCAAGCCAATTTTAGATGATGAAAAATATCACTCAATTTTACAAAATTAACGTATC
ATCTTATCTGACAGAAAGTTCCGCATTTTAAAAAGACTCCTCGAATGGAGATATAAAATG
GCTGCTAAATATGATGAAAATCCTACCTTTGTTTTAGCTAATGATATTCTTTTCAATATT
GTAAATAGACTACCCTAAACTCAGAAAGAGTTTGCATCTTCAAATCTTAAGCTTAGTTAC
GTATGCCAATATCATGCAAACGAAATTCTTTCTATTATTAAGGAAGAAATTGAATCTGAA
CAAAAGTCTAAATCTGGAGAATCAGAGAGTGCCACCAAAAATTAAAGTGAAATGGAAACT
GAAGATCTGATTTATGCCTCTCGTAACCATAATAATAACATATCAGGATACTAAATAATT
AACACTCAGAGTCACCAAATGGAGTAGGAGCTTGAAGATGAAGAGGTTTCCTTCAAATTT
GAAGTAATTGATGTATAAATTGGGGTGTATTAAGGCAATTTGAATATTTTAGAAGACCAC
ATACTATCATCTTCAACCTCTGCTGAAATATAATCAAAAATAGATAAAATTAATTCTTCT
TTCTTCTATGCAGATCCTGTAGATTTTTATTGCGAAAAATACCCTTTTATGAGAGAAGCT
TATGAACTCGCTAAATTGCAAGAAGAAGAAATTATGAAAAAAAGAAATGACCTGGCCTAC
ATTTAGAGTAAAAACCCATTTGAAGGTGAAAACGAAGGACAAACTAACAAGGAAGAAGAA
GAAAGAGATATTTATTTAGCATTTGATAAGGAAAAAGGACCTTCTTCTAAACCAAAAGAA
GTTGAACAAATAAATGTGCCTGATTTACCTCAATCTTATGAAGATTAGTTTAAAACAAGT
CTCAAAAAGAGAAAATATAATTTTGGCAATGAAGCAAAAAGAAACAACAACTAAGATGAA
GAGGGAGAAGAAGATAATGAAAATGGAGAAAAAATTTACAAAAAAAGATCTACTGGATAA
AAAAGTACATTCGATATGTTAATAGAGTAAGGTCTCAGAGAACAAACTGACTCTGAAGAA
TCAGATTCTGAAGAAGGTGAATAATAGTAGAAGAAGAAAAAAAGAGAGGTTACAGAAGAA
GAAAAAAAACAAATCGAAGATAATTTTAACCAGTTTGCAGATAAAATAAGAAATAGAATC
AATAAAGATCCTAAGTTTAAATCTGGTATCAATGCATAAAAAAAATTCAACAGTAGCAAT
AATAAAAAGGGTGGTAATAAAAAAAATAATAAGTTTATAAGCAAGTTCAACAAAAGCGGA
TTTTGA

>TTHERM_01122740(protein)
MASNNKIKDLDEILNQKDFMKQVLQKDASLVRLSNSLPQNDEMKFYMNNEQLKQKQKAIN
VKILHQLKKIASFIQFEQASSIDLNHFSHIIDMNDLLFENIDTSLDKIKKINNVTESSLF
DPSKTISSDKGFKPISGEESEDIITIATKEKPQNHFKDCIDNSIEHPFIPVIKEKLNADV
PLDDVIVQVQREGAESFFKTIQDPLQYEFPHPYAYEIENFNFSEQQLQTDNIIVQEPISL
KEELVFVDKEDILDEMIESLKQCSEVAIDLEHHSYRSFNGITCLMQISSRTKDYIVDVFS
VWKSLHKLNAVTTDKNIVKVLHGADMDIQWLQRDFGIYIVNLFDTGQAARTLSMPSYALA
YLLQSISKVPTDKKYQLADWRIRPLPREMISYARSDTHYLLSIYDNLRIQLVSKALQQGQ
NASHFIESVLNKSRAICLKKYVKPILDDEKYHSILQNQRIILSDRKFRILKRLLEWRYKM
AAKYDENPTFVLANDILFNIVNRLPQTQKEFASSNLKLSYVCQYHANEILSIIKEEIESE
QKSKSGESESATKNQSEMETEDLIYASRNHNNNISGYQIINTQSHQMEQELEDEEVSFKF
EVIDVQIGVYQGNLNILEDHILSSSTSAEIQSKIDKINSSFFYADPVDFYCEKYPFMREA
YELAKLQEEEIMKKRNDLAYIQSKNPFEGENEGQTNKEEEERDIYLAFDKEKGPSSKPKE
VEQINVPDLPQSYEDQFKTSLKKRKYNFGNEAKRNNNQDEEGEEDNENGEKIYKKRSTGQ
KSTFDMLIEQGLREQTDSEESDSEEGEQQQKKKKREVTEEEKKQIEDNFNQFADKIRNRI
NKDPKFKSGINAQKKFNSSNNKKGGNKKNNKFISKFNKSGF