Identifiers and Description

Gene Model Identifier

TTHERM_00095540

Standard Name

CBF5 (Centromere Binding Factor 5)

Aliases

PreTt22853 | 7.m00302

Description

CBF5 tRNA pseudouridine synthase; Putative rRNA pseudouridine synthase

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Biological Process

Domains

  • ( PF00831 ) ribosomal protein L29
  • ( PF01472 ) PUA domain
  • ( PF01509 ) TruB family pseudouridylate synthase (N
  • ( PF08068 ) DKCLD (NUC011) domain
  • ( PF08660 ) Oligosaccharide biosynthesis protein Alg14 like
  • ( TIGR00012 ) ribosomal protein L29
  • ( TIGR00425 ) rRNA pseudouridine synthase, putative
  • ( TIGR00431 ) tRNA pseudouridine synthase B
  • ( TIGR00451 ) uncharacterized domain 2

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Stentor Coeruleus SteCoe_38151 0
Description: None
WormBase WBGene00010478 9.997093137033517e-262
Description: Putative H/ACA ribonucleoprotein complex subunit 4 status:Confirmed UniProt:O17919 protein_id:CAB07244.1
Tetrahymena borealis EI9_00259.1 9.997093137033517e-262
Description: rRNA pseudouridine synthase, family protein (426 aa)
DictyBase DDB_G0281933 9.997093137033517e-262
Description: nola4 on chromosome: 3 position 5161271 to 5163028
Oxytricha Contig17910.0.g6 9.997093137033517e-262
Description: DKCLD (NUC011) domain
SGD YLR175W 9.997093137033517e-262
Description: CBF5 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), acts on both large and small rRNAs and on snRNA U2; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00095540(coding)
ATGGGTAAAGATAAGAAGAAGCAAAGAAAGCAATCAAGCGAAGTTGCTGAAGTTGAAGAG
CAAGTCGTCGCTTAAGATTTTATTAAACCTTCCAAGGGAGGCGCTAAGTTGGATGCTAGC
CAATGGCCCTTATTATTAAAGAATTACGATAAGATGAACATCAGATCATCTCACTACACC
CCCATTCCTAACGGATCTAACCCCCTAGCTAGACCCATGGAAGAACATTTAAAATATGGT
GTTATGAATTTGGATAAGCCTTCTAACCCCTCTTCTCACGAAGTTGTCGCATGGGTTAAG
AAGTTGTTCGAAAATATCACTAAGATGGAAAAGACCGGTCACTCTGGTACCCTTGATCCT
AAGGTTACTGGTTGTTTGATCGTTTGTTTGAACCGTGCTACTAGATTGGTTAAGGCTCAA
TAGAGCGCTGGTAAGGAATACGTTGGTATTGTTAGACTCCACAACGATATTGAATCCGAA
CTCAAGCTCGCTAAGGCCCTCCAACAATTGACTGGTCCCCTTTTCCAAAAGCCCCCTCTT
ATTTCCGCTGTCAAGAGAGAATTGAGAGTTAGAACTATTTATGAATCTAAGTTAATTGAA
TACAATCCCGAAAAGAAGATGGGTATCATCTGGATGAGTTGCGAAGCTGGTACTTACGTT
AGAACCCTCTGTGTCCACTTAGGTCTCTTACTCGGTACTGGTGGTCATATGGAAGAACTT
AGAAGAGTTCGTTCTGGTATCCTCGACGAAAACTAATATCTCGTCACCATGCACGACGTC
AAGGACTCTATCTGGAGATATCAACACTTCAAGGATGAATCTTATCTCAGACGTGTTGTT
TTACCTCTTGAAGTTTTACTTACTAGTTTCCCTCGTATTGTCGTTAAGGATTCTACCGTT
AACTCTATCTGTTATGGTGCTAAGCTCATGCTCCCTGGTGTCCTCCGTTATGACAACAAC
ATTGAAAACGGTAAGGAAGTAGTTTTGATCACCACCAAGGGTGAAGCTATCGCTGTTGCT
GTTGCTTAAATGACCACCTCCGAACTCGCCACCTGCGATCACGGTATCGTCTGCAAGACC
AAGAGAGTTATTATGGACAGAGACCTCTATCCCAAGAGATGGGGTTTGGGTCCTAGAGCC
TTAAGAAAGAAAAACCTCATCAAGGAAGGTCTCTTAGATAAGCACGGAAAGCCCAACGAT
TAAACACCTAACGACTGGACTGTTTTCTACGTTAATGAAGAAAATAACAACATCCCCAAG
CCTGAAGAAAATTGA


>TTHERM_00095540(gene)
ATGGGTAAAGATAAGAAGAAGCAAAGAAAGCAATCAAGCGAAGTTGCTGAAGTTGAAGAG
CAAGTCGTCGCTTAAGATTTTATTAAACCTTCCAAGGGAGGCGCTAAGTTGGATGCTAGC
CAATGGCCCTTATTATTAAAGAATTACGATAAGATGAACATCAGATCATCTCACTACACC
CCCATTCCTAACGGATCTAACCCCCTAGCTAGACCCATGGAAGAACATTTAAAATATGGT
GTTATGAATTTGGATAAGCCTTCTAACCCCTCTTCTCACGAAGTTGTCGCATGGGTTAAG
AAGTTGTTCGAAAATATCACTAAGATGGAAAAGACCGGTCACTCTGGTACCCTTGATCCT
AAGGTTACTGGTTGTTTGATCGTTTGTTTGAACCGTGCTACTAGATTGGTTAAGGCTCAA
TAGAGCGCTGGTAAGGAATACGTTGGTATTGTTAGACTCCACAACGATATTGAATCCGAA
CTCAAGCTCGCTAAGGCCCTCCAACAATTGACTGGTCCCCTTTTCCAAAAGCCCCCTCTT
ATTTCCGCTGTCAAGAGAGAATTGAGAGTTAGAACTATTTATGAATCTAAGTTAATTGAA
TACAATCCCGAAAAGAAGATGGGTATCATCTGGATGAGTTGCGAAGCTGGTACTTACGTT
AGAACCCTCTGTGTCCACTTAGGTCTCTTACTCGGTACTGGTGGTCATATGGAAGAACTT
AGAAGAGTTCGTTCTGGTATCCTCGACGAAAACTAATATCTCGTCACCATGCACGACGTC
AAGGACTCTATCTGGAGATATCAACACTTCAAGGATGAATCTTATCTCAGACGTGTTGTT
TTACCTCTTGAAGTTTTACTTACTAGTTTCCCTCGTATTGTCGTTAAGGATTCTACCGTT
AACTCTATCTGTTATGGTGCTAAGCTCATGCTCCCTGGTGTCCTCCGTTATGACAACAAC
ATTGAAAACGGTAAGGAAGTAGTTTTGATCACCACCAAGGGTGAAGCTATCGCTGTTGCT
GTTGCTTAAATGACCACCTCCGAACTCGCCACCTGCGATCACGGTATCGTCTGCAAGACC
AAGAGAGTTATTATGGACAGAGACCTCTATCCCAAGAGATGGGGTTTGGGTCCTAGAGCC
TTAAGAAAGAAAAACCTCATCAAGGAAGGTCTCTTAGATAAGCACGGAAAGCCCAACGAT
TAAACACCTAACGACTGGACTGTTTTCTACGTTAATGAAGAAAATAACAACATCCCCAAG
CCTGAAGAAAATTGA


>TTHERM_00095540(protein)
MGKDKKKQRKQSSEVAEVEEQVVAQDFIKPSKGGAKLDASQWPLLLKNYDKMNIRSSHYT
PIPNGSNPLARPMEEHLKYGVMNLDKPSNPSSHEVVAWVKKLFENITKMEKTGHSGTLDP
KVTGCLIVCLNRATRLVKAQQSAGKEYVGIVRLHNDIESELKLAKALQQLTGPLFQKPPL
ISAVKRELRVRTIYESKLIEYNPEKKMGIIWMSCEAGTYVRTLCVHLGLLLGTGGHMEEL
RRVRSGILDENQYLVTMHDVKDSIWRYQHFKDESYLRRVVLPLEVLLTSFPRIVVKDSTV
NSICYGAKLMLPGVLRYDNNIENGKEVVLITTKGEAIAVAVAQMTTSELATCDHGIVCKT
KRVIMDRDLYPKRWGLGPRALRKKNLIKEGLLDKHGKPNDQTPNDWTVFYVNEENNNIPK
PEEN