Identifiers and Description

Gene Model Identifier

TTHERM_00144830

Standard Name

TWI11 (Tetrahymena piWI 11)

Aliases

PreTt26691 | 11.m00388 | 3702.m00110

Description

TWI11 piwi domain protein; Argonaute/Piwi family protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

  • ( SD02064 )
  • ( SD02065 )
  • ( SD02066 ) Macronucleus: N-terminal HA tag on Twi 11
  • ( SD02067 ) Macronucleus: N-terminal HA tag on Twi 11
  • ( SD02114 )
  • ( SD02797 ) Micronucleus: HA tagged TWI11
  • ( SD02798 ) Micronucleus: HA tagged TWI11
  • ( SD02799 ) Micronucleus: Neo3 upstream of HA tagged TWI11
  • ( SD02800 ) Micronucleus: Neo3 upstream of HA tagged TWI11
  • ( SD02801 ) Micronucleus: TWI11-HA with neo3 in 5’ region Macronucleus: TWI11-HA with neo3 in 5’ region
  • ( SD02802 ) Micronucleus: TWI11-HA with neo3 in 5’ region Macronucleus: TWI11-HA with neo3 in 5’ region
  • ( SD02803 ) Micronucleus: TWI11-HA with neo3 in 5’ region Macronucleus: TWI11-HA with neo3 in 5’ region
  • ( SD02804 ) Micronucleus: TWI11-HA with neo3 in 5’ region Macronucleus: TWI11-HA with neo3 in 5’ region
  • ( SD02805 ) Micronucleus: TWI11-HA with neo3 in 5’ region Macronucleus: TWI11-HA with neo3 in 5’ region
  • ( SD02853 ) Macronucleus: TWI11 with neo3
  • ( SD02854 ) Micronucleus: Part of TWI11 coding replaced with neo3 cassette.
  • ( SD02855 ) Micronucleus: Part of TWI11 coding replaced with neo3 cassette, homozygous
  • ( SD02856 ) Micronucleus: Part of TWI11 coding replaced with neo3 cassette, heterozygous
  • ( SD02857 ) Micronucleus: Part of TWI11 coding replaced with neo3 cassette, homozygous
  • ( SD02858 ) Micronucleus: Neo 3 cassette replaces part of TWI11 coding region Macronucleus: Neo 3 cassette replaces part of TWI11 coding region
  • ( SD02860 ) Micronucleus: Neo3 replaces part of TWI11 Macronucleus: Neo3 replaces part of TWI11
  • ( SD02861 ) Micronucleus: Original ΔTWI11 mic replaced by the WT mic of a CU427 cell Macronucleus: Still has ΔTWI11 with neo3 replacing part of coding
  • ( SD02862 ) Micronucleus: neo3 in coding Macronucleus: neo3 in coding
  • ( SD02863 ) Macronucleus: TWI11 with neo3
  • ( SD02864 ) Macronucleus: TWI11 with neo3
  • ( SD02865 ) Macronucleus: TWI11 with neo3
  • ( SD02866 ) Macronucleus: neo3 replaces part of coding region

Homologs

Source Identifier Score
Tetrahymena borealis EI9_04784.1 9.997093137033517e-262
Description: piwi domain-containing protein (799 aa)
Oxytricha Contig1484.1.g65 8.002927718340724e-80
Description: Piwi domain
DictyBase DDB_G0271870 2.0008536325002377e-42
Description: agnC on chromosome: 2 position 975850 to 979616
WormBase WBGene00004178 1.9994920269952867e-34
Description: locus:prg-1 status:Confirmed UniProt:P90786 protein_id:CAA98113.1
Stentor Coeruleus SteCoe_687 5.380186160021138e-32
Description: None

General Information

No. Gene Name(s) Paragraph Text
108 TWI11, TWI1 Maternally-expressed Twi1p is loaded with Early-scnRNAs expressed from the MIC at early conjugation stages while zygotically-expressed Twi1p and Twi11p are loaded with Late-scnRNAs expressed from the new MAC at late conjugation stages (Noto et al. 2015).

Associated Literature

  1. Ref:29887308: Noto T, Mochizuki K (2018) Small RNA-Mediated trans-Nuclear and trans-Element Communications in Tetrahymena DNA Elimination. Current biology : CB 28(12):1938-1949.e5
  2. Ref:29920263: Chalker DL (2018) Transgenerational Inheritance: Parental Guidance Suggested. Current biology : CB 28(12):R702-R704
  3. Ref:29021213: Noto T, Mochizuki K (2017) Whats, hows and whys of programmed DNA elimination in Tetrahymena. Open biology 7(10):
  4. Ref:27892853: Hamilton EP, Kapusta A, Huvos PE, Bidwell SL, Zafar N, Tang H, Hadjithomas M, Krishnakumar V, Badger JH, Caler EV, Russ C, Zeng Q, Fan L, Levin JZ, Shea T, Young SK, Hegarty R, Daza R, Gujja S, Wortman JR, Birren BW, Nusbaum C, Thomas J, Carey CM, Pritham EJ, Feschotte C, Noto T, Mochizuki K, Papazyan R, Taverna SD, Dear PH, Cassidy-Hanley DM, Xiong J, Miao W, Orias E, Coyne RS (2016) Structure of the germline genome of Tetrahymena thermophila and relationship to the massivel
  5. Ref:26095658: Noto T, Kataoka K, Suhren JH, Hayashi A, Woolcock KJ, Gorovsky MA, Mochizuki K (2015) Small-RNA-Mediated Genome-wide trans-Recognition Network in Tetrahymena DNA Elimination. Molecular cell 59(2):229-42
  6. Ref:19656801: Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32

Sequences

>TTHERM_00144830(coding)
ATGAGTTTTAACGATAATAGTAATACTTTGGTTACTAATCATTACAAAATTAAAATTAAT
AATATAAAGATTAATTGCTATGAATTTTAGACTTAGCCTCCTATTGATCCTCTTTTGCTT
AACCGTAAGTCAAGATACATCTCAAGAGTTTTCAACAAAAAGATAAAAGAAATATTTAGT
ACCTTTATTATTGGGTCTTAACTTATTTACTCTCCTATTGATTTGCATAATAAAGTCAGT
CTTGGAACCTTTGATTTTGTATCCCCTAAGACTGATGGGTGTGAGTCCTTCACTTAAGAG
CTTGAAGTTTTCTTAGTAAAGAAAAAAGATATTGTTGGATAATAGCTTGAAGAGGAAAAT
AAAGAACTTCAAAATATATTGGGATAGCTAATGAGAAACTTCTAAAATAACACTAAAGGG
TTTTAATAGCTTGGTGCTACTAAGAGGTTTGCTATGAATGTTATAAAAAATATCTCTAAT
GGCCTTGAAGCAGTTCTCGGAGTTGAAACTTTCTTCAAATTTAGTCCTCAAACAGGATTT
TAACTTTCAGTAGATTACTGTATCAAAGTTATTAACAACACATCTGTTTATGATTTCTTA
AAAAAATCTATGTCTTAAGGAGCAGATAGTATCCAAGAAAAAATGTAAAACTGTGTAGTT
ATTAGTAATTATGGAGATAAAAAATTGTACAAGGTTAATGGAGTAGCGTTTGATTTAAAT
CCTAATTCTTTCTTTGAAATGAGGGATCCTAATGAATCTACTGGTAAAAAGAAAATATCA
TTCGTTTAATACTATGAGCTCGTCCATAACATCAGAATTAGAGATAATAGATAGCCTCTT
CTTATAGTTGAAAAGAAAAGAAGATAAAATAAAAGAGCTAATTAAGAAGGAAAACCATAA
TAAGAAACTCCTAAAATCTATTTAATACCAGAGTTATGCTAAATGACTGGCATTCCTGAT
GAACTTCAAAATGACTTTATGCTCAAGAAAGCTATAACACAAGTTTCCTAGCCCAAACCT
TAAGAGAGATCTTAGCACTGTGGAAATTATGTCTCAGCTCTAATACACTAAAACTAAAAG
GCTCTAAGTGAATGGGGCATTTAACTAAGCTAAAATGACCCTGTTAAAGCTCGTTATCAA
GTTATCCAACCAGGATGTATTCTTATGAATTAAAATAGAGAAATTAACATTTATGGAGAA
AAATAACTAGATAGAAAAATTTAAGATAGAATGTACCAGCCTTGCTACCTCAAGAAGTGG
TGTGCCATTTGTCACAAATCTGATCAATAATTGGCTGGCTAGTTCATGTCAACACTGAAG
AATAGAATGCAAGCTCATGGGATAGGATATAATGAACCTAATTATTTTACTGTTGAAGGT
TAATCACAAGATGAACTCAAAAGGCTTATCGATTCATTCCCACCTGATGTTGATTTTATT
GTATTTATATTGCAAGGAGCCAAAGGAAAAGGCAAAAATTATTAGTACCTAAAATCTTTT
TTGTTAAAAGAAAAACCTATTCCTAGCTAGATGATTCTTTAAGGTACTATCAAGAGCAGT
AAAGATGGTTGCTAAGTTATTTGTAACAAGATATGCAATCAAATATGTATTAAAGTTGGA
GGAATACCTTACATCATCAAAGATCTTCCATTTAGTAATCTTCCTACTATGCTTGTTGGT
ATAGATTACATCCGCAAAGAAAACTAAAAATCAGTTTATTCATTTGTTGCTTCAGTTGAC
AGTACATTCTGTAAATTTTTTTCAGGTGCTTAACTTTTAGACGCTTAAGACTAAAATAAC
AAATTTGTTGACAAGCTTTTGCAAGCAAGTCTTACTTAATTTAAATAAAAAAATGGAATA
CTGCCTTAACGTGTTATAATTTATAGATAAGCTGCTAACAATATATTGAACGAGCCTCTA
AAGGAAGAAATTGCAATCATGAAAAAATGCCTATCAGAAATGGAAATGTCTTAATGCAAG
ATCCACATAGTTGGTGTTAACAGTAGTGATAAGACTAAATTTTTCAATGAAGATTACTCT
AATCCAGCTTAAGGAACTGTCATTAGTTAAGATGTAGTATCATCGTAAGGAGATTTCTTC
TTGGTGTCTCAAAGATCTATGCAAGGAACTGCATAACCTATGATGTACAAAGAGATTTAC
AGTGATTATGAAGGTATGGAATTAGAATAAATAAGGACTTAACTTCATACCTTGACCTAT
AGGATGAGTTATCTTTTCTACAATTTCACTGGAGCAATCAAGATACCAAGCATCTTGAAG
TATGCTGAATAGTAAACTAAATTCATGAAAAACAACTTTGAGAACTTGAATAAGATGGAC
CCTCAAACACTCCTCAGCTAGAAGATGTGTGATAAGAATTCTACATTCTATATTTGA


>TTHERM_00144830(gene)
ATGAGTTTTAACGATAATAGTAATACTTTGGTTACTAATCATTACAAAATTAAAATTAAT
AATATAAAGATTAATTGCTATGAATTTTAGACTTAGCCTCCTATTGATCCTCTTTTGCTT
AACCGTAAGTCAAGATACATCTCAAGAGTTTTCAACAAAAAGATAAAAGAAATATTTAGT
ACCTTTATTATTGGGTCTTAACTTATTTACTCTCCTATTGATTTGCATAATAAAGTCAGT
CTTGGAACCTTTGATTTTGTATCCCCTAAGACTGATGGGTGTGAGTCCTTCACTTAAGAG
CTTGAAGTTTTCTTAGTAAAGAAAAAAGATATTGTTGGATAATAGCTTGAAGAGGAAAAT
AAAGAACTTCAAAATATATTGGGATAGCTAATGAGAAACTTCTAAAATAACACTAAAGGG
TTTTAATAGCTTGGTGCTACTAAGAGGTTTGCTATGAATGTTATAAAAAATATCTCTAAT
GGCCTTGAAGCAGTTCTCGGAGTTGAAACTTTCTTCAAATTTAGTCCTCAAACAGGATTT
TAACTTTCAGTAGATTACTGTATCAAAGTTATTAACAACACATCTGTTTATGATTTCTTA
AAAAAATCTATGTCTTAAGGAGCAGATAGTATCCAAGAAAAAATGTAAAACTGTGTAATC
AATTATTATTTCTTGATTTTATTTTTTACATTAATTAAAAATTTTATTTAAACAGGTAGT
TATTAGTAATTATGGAGATAAAAAATTGTACAAGGTTAATGGAGTAGCGTTTGATTTAAA
TCCTAATTCTTTCTTTGAAATGAGGGATCCTAATGAATCTACTGGTAAAAAGAAAATATC
ATTCGTTTAATACTATGAGCTCGTCCATAACATCAGAATTAGAGATAATAGATAGCCTCT
TCTTATAGTTGAAAAGAAAAGAAGATAAAATAAAAGAGCTAATTAAGAAGGAAAACCATA
ATAAGAAACTCCTAAAATCTATTTAATACCAGAGTTATGCTAAATGACTGGCATTCCTGA
TGAACTTCAAAATGACTTTATGCTCAAGAAAGCTATAACACAAGTTTCCTAGCCCAAACC
TTAAGAGAGATCTTAGCACTGTGGAAATTATGTCTCAGCTCTAATACACTAAAACTAAAA
GGCTCTAAGTGAATGGGGCATTTAACTAAGCTAAAATGACCCTGTTAAAGCTCGTTATCA
AGTTATCCAACCAGGATGTATTCTTATGAATTAAAATAGAGAAATTAACATTTATGGAGA
AAAATAACTAGATAGAAAAATTTAAGATAGAATGTACCAGCCTTGCTACCTCAAGAAGGT
ATTTTTTATTTTTAATTTTTTTTAATAATTTTTCAAACACAAGAAAATTTTTTATTTATT
TTTTACATTTTATTTATAATAATATTATTTAAAAGTGGTGTGCCATTTGTCACAAATCTG
ATCAATAATTGGCTGGCTAGTTCATGTCAACACTGAAGAATAGAATGCAAGCTCATGGGA
TAGGATATAATGAACCTAATTATTTTACTGTTGAAGGTTAATCACAAGATGAACTCAAAA
GGCTTATCGATTCATTCCCACCTGATGTTGATTTTATTGTATTTATATTGCAAGGAGCCA
AAGGAAAAGGCAAAAATTATTAGTACCTAAAATCTTTTTTGTTAAAAGAAAAACCTATTC
CTAGCTAGATGATTCTTTAAGGTACTATCAAGAGCAGTAAAGATGGTTGCTAAGTTATTT
GTAACAAGATATGCAATCAAATATGTATTAAAGTTGGAGGAATACCTTACATCATCAAAG
ATCTTCCATTTAGTAATCTTCCTACTATGCTTGTTGGTATAGATTACATCCGCAAAGAAA
ACTAAAAATCAGTTTATTCATTTGTAAAATTTTTTTTTTCATCTATTCATTAAAAGAAAA
AAATAAATTATTAATTAATTACTTTAACTTTACTAATTAAGGTTGCTTCAGTTGACAGTA
CATTCTGTAAATTTTTTTCAGGTGCTTAACTTTTAGACGCTTAAGACTAAAATAACAAAT
TTGTTGACAAGCTTTTGCAAGCAAGTCTTACTTAATTTAAATAAAAAAATGGAATACTGC
CTTAACGTGTTATAATTTATAGATAAGCTGCTAACAATATATTGAACGAGCCTCTAAAGG
AAGAAATTGCAATCATGAAAAAATGCCTATCAGAAATGGAAATGTCTTAATGCAAGATCC
ACATAGTTGGTGTTAACAGTAGTGATAAGACTAAATTTTTCAATGAAGATTACTCTAATC
CAGCTTAAGGAACTGTCATTAGTTAAGATGTAGTATCATCGTAAGGAGATTTCTTCTTGG
TGTCTCAAAGATCTATGCAAGGAACTGCATAACCTATGATGTACAAAGAGATTTACAGTG
ATTATGAAGGTATGGAATTAGAATAAATAAGGACTTAACTTCATACCTTGACCTATAGGA
TGAGTTATCTTTTCTACAATTTCACTGGAGCAATCAAGATACCAAGCATCTTGAAGTATG
CTGAATAGTAAACTAAATTCATGAAAAACAACTTTGAGAACTTGAATAAGATGGACCCTC
AAACACTCCTCAGCTAGAAGATGTGTGATAAGAATTCTACATTCTATATTTGA


>TTHERM_00144830(protein)
MSFNDNSNTLVTNHYKIKINNIKINCYEFQTQPPIDPLLLNRKSRYISRVFNKKIKEIFS
TFIIGSQLIYSPIDLHNKVSLGTFDFVSPKTDGCESFTQELEVFLVKKKDIVGQQLEEEN
KELQNILGQLMRNFQNNTKGFQQLGATKRFAMNVIKNISNGLEAVLGVETFFKFSPQTGF
QLSVDYCIKVINNTSVYDFLKKSMSQGADSIQEKMQNCVVISNYGDKKLYKVNGVAFDLN
PNSFFEMRDPNESTGKKKISFVQYYELVHNIRIRDNRQPLLIVEKKRRQNKRANQEGKPQ
QETPKIYLIPELCQMTGIPDELQNDFMLKKAITQVSQPKPQERSQHCGNYVSALIHQNQK
ALSEWGIQLSQNDPVKARYQVIQPGCILMNQNREINIYGEKQLDRKIQDRMYQPCYLKKW
CAICHKSDQQLAGQFMSTLKNRMQAHGIGYNEPNYFTVEGQSQDELKRLIDSFPPDVDFI
VFILQGAKGKGKNYQYLKSFLLKEKPIPSQMILQGTIKSSKDGCQVICNKICNQICIKVG
GIPYIIKDLPFSNLPTMLVGIDYIRKENQKSVYSFVASVDSTFCKFFSGAQLLDAQDQNN
KFVDKLLQASLTQFKQKNGILPQRVIIYRQAANNILNEPLKEEIAIMKKCLSEMEMSQCK
IHIVGVNSSDKTKFFNEDYSNPAQGTVISQDVVSSQGDFFLVSQRSMQGTAQPMMYKEIY
SDYEGMELEQIRTQLHTLTYRMSYLFYNFTGAIKIPSILKYAEQQTKFMKNNFENLNKMD
PQTLLSQKMCDKNSTFYI