Identifiers and Description

Gene Model Identifier

TTHERM_00201680

Standard Name

RAB48 (RAB GTPase 48)

Aliases

PreTt13739 | 17.m00346

Description

RAB48 Ras family small GTPase; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF08477 ) Miro-like protein
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_41344.1	5.999207186122604e-25
	Description: hypothetical protein (168 aa)
Oxytricha	Contig14371.0.g32	3.9989916100764785e-24
	Description: Ras family
SGD	YFL005W	4.0006511639687014e-23
	Description: SEC4 Rab family GTPase essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane
DictyBase	DDB_G0292406	1.9994498063102785e-22
	Description: rab4 on chromosome: 6 position 1558648 to 1559514
WormBase	WBGene00019317	9.997019043202629e-21
	Description: status:Confirmed UniProt:Q21137 protein_id:CCD72274.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00201680(coding)
ATGTCTACTTAAAATGATAGCATATAAAAAACGATAAAGTGTATTTTAGTGGGAGATAGA
TTTGTTGGAAAATCTGCTATATTTTATTCGCATATTTATGAAAAGGTTGTTCAATATCTA
ACTAATCAAGCTGATTGTTAAGTTTTGAGATTGAAAAAAGGAAATGTAGAAATTAAATTT
TAATTTTGGGATTTGAACGAGCTGACAAGAGAAAAAACATTAAAATATTATCGTTAAACT
TCTATTTTAATGATAATTTACGATGTTACAAACAGAAACTCATTTACAAATATTAAAAAT
TATTATAAAGATTTTGTTGAATAAGAAAACCAATAATCAATTATTGCTCTTGTTGGAAAT
AAAAAGGATCTAAATGAGTCTAGATTAGTTTCATTTTTTGAGGGTTAAAATCTAGCCAAG
TCGTTAGGTGTAGAGTTTTTTGAAGTATCTGCTTTTACGGGTGATAAAATTAAAGATTTG
TATGACTTCTTAATGAATAAATAAATTGATTTTGTCGAATATTGA

>TTHERM_00201680(gene)
ATGTCTACTTAAAATGATAGCATATAAAAAACGATAAAGTGTATTTTAGTGGGAGATAGA
TTTGTTGGAAAATCTGCTATATTTTATTCGCATATTTATGAAAAGGTTGTTCAATATCTA
ACTAATCAAGCTGATTGTTAAGTTTTGAGATTGAAAAAAGTAAAAATAAATATTTCATAT
TAGTTTATCTAGTATATTTTATATATTTTAGGGAAATGTAGAAATTAAATTTTAATTTTG
GGATTTGAACGAGCTGACAAGAGAAAAAACATTAAAATATTATCGTTAAACTTCTATTTT
AATGATAATTTACGATGTTACAAACAGAAACTCATTTACAAATATTAAAAATTATTATAA
AGATTTTGTTGAATAAGAAAACCAATAATCAATTATTGCTCTTGTTGGAAATAAAAAGGA
TCTAAATGAGTCTAGATTAGTTTCATTTTTTGAGGGTTAAAATCTAGCCAAGTCGTTAGG
TGTAGAGTTTTTTGAAGTATCTGCTTTTACGGGTGATAAAATTAAAGATTTGTATGACTT
CTTAATGAATAAATAAATTGATTTTGTCGAATATTGA

>TTHERM_00201680(protein)
MSTQNDSIQKTIKCILVGDRFVGKSAIFYSHIYEKVVQYLTNQADCQVLRLKKGNVEIKF
QFWDLNELTREKTLKYYRQTSILMIIYDVTNRNSFTNIKNYYKDFVEQENQQSIIALVGN
KKDLNESRLVSFFEGQNLAKSLGVEFFEVSAFTGDKIKDLYDFLMNKQIDFVEY