Identifiers and Description

Gene Model Identifier

TTHERM_00421000

Standard Name

RRM18 (RNA Recognition Motif-containing protein 18)

Aliases

PreTt07225 | 46.m00280 | 3679.m00130

Description

RRM18 RNA-binding family CELF1 RNA recognition motif 3 in CELF/bruno-like protein; RNA recognition motif-containing protein; 2014 reannotation incorporated RRM19 (TTHERM_00421010) into this gene model

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( PF08777 ) RNA binding motif
• ( TIGR01622 ) splicing factor, CC1-like family
• ( TIGR01628 ) polyadenylate binding protein, human types
• ( TIGR01659 ) sex-lethal family splicing factor
• ( TIGR01661 ) ELAV/HuD family splicing factor

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10974.1	9.997093137033517e-262
	Description: hypothetical protein (307 aa)
DictyBase	DDB_G0270634	2.9990874792167046e-33
	Description: DDB_G0270634 on chromosome: 1 position 3530459 to 3532109
WormBase	WBGene00006807	8.999890565246037e-26
	Description: locus:unc-75 status:Confirmed UniProt:G5EE68 protein_id:CAB03896.4
Oxytricha	Contig18677.0.g10	9.997019043202629e-21
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD	YER165W	3.001003044337619e-17
	Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
Stentor Coeruleus	SteCoe_20459	6.305116760146989e-16
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00421000(coding)
ATGAATACCAACGAATACATAGACTAATTCGATTAAAATAAAAATATGGGAGCTTATTAC
GATAGCAATGGTTATGCTATGTAAAACTAGTAATAAATGGATTAAACCTACCAAAACCCT
CAAAACGAAATTAAGGAAGGTGGTGATCTACTTAAAATTAACAATACTTAAATTTTGATC
CGTAGATAGGAAAATACAGTCGATTTAAAACTCTTTGTCGGTTAACTACCAAAGACATGG
GAAAAAGAGCAAGTTAAAGATTTCTTTTCTAAATTCGGCAGAATTTATGAAGTTTAGATT
ATTAGAGACAATAAGGGATAACACAAGGGTTGCGCTTTTGTTAAATTTGCTTCAATGACT
GACGCAGAAAAAGCTATTGAAGCTGTAAAAAACACCACCTTTCCAGGAATGAAGAATAAC
GTTGAAATTAAATGGGCTGACAACGAAGAAGAAAGACTTGGTGTCAACTAAGACTCTGAC
CATAAATTATTTATTGGTTCTCTTCCTAAGTCTTGCACTGAATAAAATATTAAAGATATC
TTTGAATTTTTTGGTGAAATTGAAGAATTACACCTTATGAAGGATAACTAGTAAAACACA
AGATAAGCATTTTTAAAATTCAAACAAAAAGAAAAAGCTCACCTTGCTATCAGAAACTTA
AACTCTCAAGTCTACATCAATGATGCTGAAAATCCAATTGAAGTTAGATTCGCTAAGAAA
TATGTTAAGCAAGAAAAGCCAAATCCTACTCCAGCTCCTAAACCTGACCCTGCTCCTGCT
CCTTAGCAAATCAGCTGGTAAAAAGTATACTTCAAATACTACACTGAAGAGAATGAACCT
TACTACTTCCATCCTCTTCTAAATACTAGTGCCTTTGACAAACCTGGTCCTGGAAGCTTG
ATTTTAGATATTGATGGAAATCAAGAATACATAGATAACAACCCTAGACCTACAAGAAAC
GAACCTGTTGTTATTAATGATAGAAAGGATGTTTATGGCAAAAAGCATGGACCTCCTGGA
GCCAATCTTTTTATATTCCACTTGCCCAATGACTACAGAGATTCCGATTTAGAAAAACTC
TTTTCAGAATATGGTGAGGTAATTTCTGCTAGAGTCAATACAAGACCTGATGGAACAAGC
AAAGGATTTGGTTTCATTAGTTATAACCACCCATCTTAGGCAGAGGCTGCAATCACTGCT
CTCAACGGACTCTAGATTAAAAATAAGAGACTAAAAGTTGAAATAAAAAAAGAAGGAATG
GATAACAATGGAAACATGAAGCAATCCAACCCTGGATCTTTAAACCAAACTTCTTTCCAT
CCATTCTGA

>TTHERM_00421000(gene)
ATGAATACCAACGAATACATAGACTAATTCGATTGTAAATAATGAAATTAAAAAAAAATT
TCTAACTTTAATTTACTTAACCTATGAGGAGAATTATCTTAAATATGTTTTATAATTATC
AAATTACATAGAAAATAAAAATATGGGAGCTTATTACGATAGCAATGGTTATGCTATGTA
AAACTAGTAATAAATGGATTAAACCTACCAAAACCCTCAAAACGAAATTAAGGAAGGTGG
TGATCTACTTAAAATTAACAATGTAAATTACTTAGCACTTTAATTTCTCTTTATTTATTT
TAATGGACTGTATGATAGAATTATAATAACACACACACACATTAAAATCTTAATAAGAAA
AAAATAATGATCATATAGACCATCTTACAAATAAAAAACTGAGAATAATTTTATTATTTT
TAATTAAATAGACTTAAATTTTGATCCGTAGATAGGAAAATACAGTCGATTTAAAACTCT
TTGTCGGTTAACTACCAAAGACATGGTAAAAATAAAATTAGTAAAAGTTAAGTATTTATT
GACTCAATTTTTAAATAGGGAAAAAGAGCAAGTTAAAGATTTCTTTTCTAAATTCGGCAG
AATTTATGAAGTTTAGATTATTAGAGACAATAAGGGATAACACAAGGGTTGCGCTTTTGT
TAAATTTGCTTCAATGACTGACGCAGAAAAAGCTATTGAAGCTGTAAAAAACACCACCTT
TCCAGGAGTAAATATTAATAAAATAGATTTTTAGACAAATTTATTTATTCTTATAAAATT
AACTAGCAATATATATCTATCTATCTATACATTTATACATCTATTAATTCATTAATTTCT
TAATTAATTTTCTTTTAAATTTTTAATTTCATTAGATGAAGAATAACGTTGAAATTAAAT
GGGCTGACAACGAAGAAGAAAGACTTGGTGTCAACTAAGACTCTGACCATAAATTATTTA
TTGGTTCTCTTCCTAAGTCTTGCACTGAAGTAATAAAATTTAGGACTAAGATTTAAGGTT
TTTAAATATAATATTTTAATAGTAAAATATTAAAGATATCTTTGAATTTTTTGGTGAAAT
TGAAGAATTACACCTTATGAAGGATAACTAGTAAAACACAAGATAAGCATTTTTAAAATT
CAAACAAAAAGAAAAAGCTCACCTTGCTATCAGAAACTTAAACTCTCAAGTCTACATCAA
TGATGCTGAAAATCCAATTGAAGTTAGATTCGCTAAGAAATATGTTAAGCAAGAAAAGCC
AGTAAAATTTTTTATTTAAAATATTTTTTATTTTAGTGATCAAAGCGGCTTAAAGATTGC
CGAATAAGGGTGGGTTTGATTGATCATGTGAAAAGGTAAGTTAAAAAAAAGTAATAAGGA
AATTTTATTTGTTTATTGATGGATAAAATTGGTTAGCCTTGTGAAATTCTAAATCTAAGT
TCTAGATAGATAAATGATCAATCTTTGAATCATAATAAGATAACTAAAAGTGAGGGCATC
ATTAATAACAATCAATCAAGCAAGTAAGCAGCAAGCAAACAAAAAAAAACACAACAGAAA
ATAGAATCAAAGTCTAACATTAGAAAGAAAGAAATCAAATTAACAAAATAACTAAGTAAC
TAAGTTACTAACTAACTAACTAACTAACTAATTAACTAATAACAATCAAACAACTGATCA
ACCAAAAAATTAGAGAGGATGAAGTAGATTGAAACGAAAAAGAGATGAATCTCGTCTTAT
TAGAAATAAAATAAAAGCAAGTTATCTATAATTAATAGAATAAATTAATAAATAATTAAA
ATATTATTATGAGTAAGTAGTCTACATAATCTAATAGTAAGTATGTGATCGCATGTATCG
TGTAAATTAATGTTGTAGTTGTTGTTTAAATAATAAAATAGTAATAAATTATGTTGTTGT
TATTGATGTTCCATCTTGTTATAATTACTTAAAAGCTAAATTATCAAAATCCCTGTTTAC
TAACAAACAAACAAACTAATTAACTAATAAGATCATATATCATCTATCTATCTATCTCAA
TCAATCATAAACAAACTACTTAAACACATGCATCAATCGATTTGTCTAATAGTTATATAT
TATCTATTCAACAAAAAAAAAATAAAAGCAATTTTACAGCTTTTCAAACCAATTCTTTTA
ATATTTTCATTTATCAAACTAAATTTAAAATTCAAAAATAAATAAAAACTTTATTTTTTT
AAATACAGAATCCTACTCCAGCTCCTAAACCTGACCCTGCTCCTGCTCCTTAGCAAATCA
GCGTAAGGATATTTAATCAAAAAATTTAATTTTTAAGTTTTAAAATTTAAAATTTAGTGG
TAAAAAGTATACTTCAAATACTACACTGAAGAGAATGAACCTTACTACTTCCATCCTCTT
CTAAATACTAGTGCCTTTGACAAACCTGGTCCTGGAAGCTTGATTTTAGATATTGATGGA
AATCAAGAATACATAGATAACAACCCTAGACCTACAAGAAACGAACCTGTTGTTATTAAT
GATAGAAAGGATGTTTGTAAATATATTTCAAAATTTTAAATTAATAAAATAAAAATTAAA
AAATTAATTCACTTCCTAAAATAAAACATTTCATTTTTTATTTTTTTTAAACTTACTTTT
TAAACTAAATATTAAATTATTTTTATTAAAATAGATGGTAAAATATTATTTAGATGATTC
TGATTGCACAACATAGTTTTTATTTACAAGCTAATTATCTAAATCATTTATTTTACTTTT
TTCTATTAAAATTAATAGATGGCAAAAAGCATGGACCTCCTGGAGCCAATCTTTTTATAT
TCCACTTGCCCAATGACTACAGAGATTCCGATTTAGAAAAACTCTTTTCAGAATATGGTG
AGGTAATTTCTGCTAGAGTCAATACAAGACCTGATGGAACAAGCAAAGGATTTGGTAAAT
ATTGAAGCTCTTTAAGTTAATTTTTAATGCTTAAATTATTTTAGGTTTCATTAGTTATAA
CCACCCATCTTAGGCAGAGGCTGCAATCACTGCTCTCAACGGACTCTAGATTAAAAGTAA
ATAAAATATTAGAGTAAATATAAAATATAAATAAATTTTAATATAAATAGATAAGAGACT
AAAAGTTGAAATAAAAAAAGAAGGAATGGATAACAATGGAAACATGAAGCAATCCAACCC
TGGATCTTTAAACCAAACTTCTTTCCATCCATTCTGA

>TTHERM_00421000(protein)
MNTNEYIDQFDQNKNMGAYYDSNGYAMQNQQQMDQTYQNPQNEIKEGGDLLKINNTQILI
RRQENTVDLKLFVGQLPKTWEKEQVKDFFSKFGRIYEVQIIRDNKGQHKGCAFVKFASMT
DAEKAIEAVKNTTFPGMKNNVEIKWADNEEERLGVNQDSDHKLFIGSLPKSCTEQNIKDI
FEFFGEIEELHLMKDNQQNTRQAFLKFKQKEKAHLAIRNLNSQVYINDAENPIEVRFAKK
YVKQEKPNPTPAPKPDPAPAPQQISWQKVYFKYYTEENEPYYFHPLLNTSAFDKPGPGSL
ILDIDGNQEYIDNNPRPTRNEPVVINDRKDVYGKKHGPPGANLFIFHLPNDYRDSDLEKL
FSEYGEVISARVNTRPDGTSKGFGFISYNHPSQAEAAITALNGLQIKNKRLKVEIKKEGM
DNNGNMKQSNPGSLNQTSFHPF