Identifiers and Description

Gene Model Identifier

TTHERM_00446180

Standard Name

RPB7 (RNA polymerase II subunit 7)

Aliases

PreTt03885 | 51.m00251 | 3704.m00106

Description

RPB7 RNA polymerase Rpb7 amine-terminal domain protein; RNA polymerase Rpb7- N-terminal domain containing protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899

Biological Process

• transcription (IEA) | GO:0006350

Domains

• ( PF03876 ) RNA polymerase Rpb7, N-terminal domain
• ( PF07650 ) KH domain
• ( TIGR00448 ) DNA-directed RNA polymerase

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10832.1	6.996525358388811e-93
	Description: RNA polymerase Rpb7 domain-containing protein (174 aa)
DictyBase	DDB_G0284891	0.0000000000599805963605737
	Description: rpb7 on chromosome: 4 position 2602996 to 2604032
SGD	YDR404C	0.0000000029989608248573072
	Description: RPB7 RNA polymerase II subunit B16; forms two subunit dissociable complex with Rpb4p; involved in recruitment of 3-end processing factors to transcribing RNA polymerase II complex and in export of mRNA to cytoplasm under stress conditions; also involved in translation initiation
WormBase	WBGene00021845	0.000000007002490258088747
	Description: locus:rpb-7 status:Partially_confirmed UniProt:Q9N3C9 protein_id:CCD72992.1
Oxytricha	Contig21831.0.g92	0.0007999190683310628
	Description: SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00446180(coding)
ATGTTTTATCATACATCTGGTTTAAGAACTATTTTGTAGATTCACCCTACTCATATGGGT
ATGCTTATTGGAAATGATAAAGTCAACCTTAATAATAATGATTTGCTTAAAAAAGAATTA
ATTGAAAAAGTAGAAGGTAAAAAAAGTAATGAACATGGATATATTATTTTGGTAGTAAAT
TTAAGATATATGAGCAAACCATTAATTGATTATGATGGCTTTATTAAAGTTGAGATATAG
TTTGATGCATTAACATTTAAACCATAACTTAAAGAATATATTGATATCTAAATAACTGAA
ATCAAGCAAAATCACATTGCTGGTTCTGTTGGCCCTATGAACATATTTTATGTCCCCAAT
CGTAAGCTTCCTTAACAACTTTAAAACGAATTAAAAGATGGTAAACTTGAATCTGATGAT
TTAACCTTATACGAAGGTGATAAATTGAGAGTTTTGATAGAAACTATTAACAATGATAAA
ATCCTTTGTAAAGTAGATGATGATTTTAATAGTTATTAATGA

>TTHERM_00446180(gene)
ATGTTTTATCATACATCTGGTTTAAGAACTATTTTGTAGATTCACCCTACTCATATGGGT
ATGCTTATTGGAAATGATAAAGTCAACCTTAATAATAATGATTTGCTTAAAAAAGAATTA
ATTGAAAAAGTAGAAGGTAAAAAAAGTAATGAACATGGATATATTATTTTGGTAGTAAAT
TTAAGATATATGAGCAAACCATTAATTGATTATGATGGCTTTATTAAAGTTGAGATATAG
TTTGATGCATTAACATTTAAACCATAACTTAAAGAATATATTGATATCTAAATAACTGAA
ATCAAGCAAAATCACATTGCTGGTTCTGTTGGCCCTATGAACATATTTTATGTCCCCAAT
CGTAAGCTTCCTTAACAACTTTAAAAGTAATAATTTTATTTTTAATTAATTATGTTAAAT
ATTAAAAATTGGAATAGTGTATTTGTTTTTTTATATAGATCATGTTTATTAAAGATTATT
AACTTATAAATTAGCGAATTAAAAGATGGTAAACTTGAATCTGATGATTTAACCTTATAC
GAAGGTGATAAATTGAGAGTTTTGATAGAAACTATTAACAATGATAAAATCCTTTGTAAA
GTAGATGATGATTTTAATAGTTATTAATGA

>TTHERM_00446180(protein)
MFYHTSGLRTILQIHPTHMGMLIGNDKVNLNNNDLLKKELIEKVEGKKSNEHGYIILVVN
LRYMSKPLIDYDGFIKVEIQFDALTFKPQLKEYIDIQITEIKQNHIAGSVGPMNIFYVPN
RKLPQQLQNELKDGKLESDDLTLYEGDKLRVLIETINNDKILCKVDDDFNSYQ