Identifiers and Description

Gene Model Identifier

TTHERM_00585180

Standard Name

HPL4 (Heterochromatin Protein 1 Like 4)

Aliases

PreTt04124 | 80.m00170 | 3675.m00068 | HPC

Description

HPL4 heterochromatin protein; Heterochromatin protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00385 ) 'chromo' (CHRromatin Organization MOdifier) domain
  • ( PF09311 ) Rab5 binding
  • ( TIGR00288 ) conserved hypothetical protein TIGR00288

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

  • ( SD02497 ) Macronucleus: Two HA tags after ATG of TCD3, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
  • ( SD02498 ) Macronucleus: Two HA tags after ATG of TCD3, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
  • ( SD02499 ) Macronucleus: Two HA tags after ATG of TCD4, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
  • ( SD02500 ) Macronucleus: Two HA tags after ATG of TCD4, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd
  • ( SD02532 ) Macronucleus: Used one neo4 construct to KO both adjacent TCD3 and TCD4
  • ( SD02533 ) Macronucleus: Used one neo4 construct to KO both adjacent TCD3 and TCD4

Homologs

Source Identifier Score
Tetrahymena borealis EI9_15193.1 4.997860539111522e-53
Description: hypothetical protein (347 aa)
WormBase WBGene00001996 0.000005998506718272351
Description: locus:hpl-2 status:Confirmed UniProt:G5EDE2 protein_id:CAB07241.1

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:28692189: Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):

Sequences

>TTHERM_00585180(coding)
ATGGAACAATAATAAACAAATTTAGAATACTCTCCTTATATTTTTGAGATTGAGAGCATT
TTGGAAAAGAGAATTCATCCTAAAACAGGAAAAACAGAATTTTTAGTTTAATGGAAATAA
TGGCCAGATGATCCAACATGGGAGCCAGCTTAAAATATCTAAAGCTTTTTAAATAACAAT
AATTAAAAGAAAAAGGAAGATGATTCACATTCTAACTTGAAGCAAAGAAAATTGTAAAAA
ATTGAAGACAAAGTGAAGAGGTCTGAACAAGCAAATAATCAAACTTAGAAGCTAAATGAT
AGCTTGCAATATTTAGATGAATAAATTTAATTTCTTTAAAATAAATACGAGCTTTTTATT
TCAGATTCAGAGACAGAGTAAAAAAAATTAATTCCTGATAAAATAAGCGAAATTGAACCA
GAGTAAATTGAAAATGAAGAAAATACCAATATGATGAATAACGTTTAAATTGAGCCAATC
TATAAAATATTAGACAAATAAGAAGTTGAAAATACTATTTATTATCTTATTCTCTTTTAT
GATGAAAAATTACCTTAATGGGTGAAGTAAGAAAAGCTGATTGGCTATGAAGATGAAATT
TTAGAATATGAAAAACAAATAATTTAAGAGAGCACTGAACTAAACTCTAAATAGTTATTA
GAAACCAGTATATAAAGTATACAAAATGAAAATTTATAAATAGAAAAAGATCAAAAATAA
GAAGAAAATTAATTTAAAAAGGTAATGGATCAAGAAAATCTTGAAAAAAGTAAAAATAAT
TTTAATAGGAATCAACAATTTTAAAATGATATAGATGAAGGTGATTTTTTAACAGATTAA
ATATAAGATATAGAAGCAAACTTTATGTTTACTTATAGTATTAATTGGAAACCGAGAAAA
GATGGAAACATTCCTCTAAATAAATAAGTCTAATTTGTAAAAAAAATTACAATAACGCCA
TAAGAATTCATTGATTAAATCCTATAAAATAAATTTCTTAATTGA


>TTHERM_00585180(gene)
ATGGAACAATAATAAACAAATTTAGAATACTCTCCTTATATTTTTGAGATTGAGAGCATT
TTGGAAAAGAGAATTCATCCTAAAACAGGAAAAACAGAATTTTTAGTTTAATGGAAATGT
ATATTTTATATTAAAAATTCAAGTATTTATTATTTAAAATAAATTTAATTTAGAATGGCC
AGATGATCCAACATGGGAGCCAGCTTAAAATATCTAAAGCTTTTTAAATAACAATAATTA
AAAGAAAAAGGAAGATGATTCACATTCTAACTTGAAGCAAAGAAAATTGTAAAAAATTGA
AGACAAAGTGAAGAGGTCTGAACAAGCAAATAATCAAACTTAGAAGCTAAATGATAGCTT
GCAATATTTAGATGAATAAATTTAATTTCTTTAAAATAAATACGAGCTTTTTATTTCAGA
TTCAGAGACAGAGTAAAAAAAATTAATTCCTGATAAAATAAGCGAAATTGAACCAGAGTA
AATTGAAAATGAAGAAAATACCAATATGATGAATAACGTTTAAATTGAGCCAATCTATAA
AATATTAGACAAATAAGAAGTTGAAAATACTATTTATTATCTTATTCTCTTTTATGGTAA
TATTTATTTTTGAATTATTTATTGAATTTATTGTTTAATAATTTTAGATGAAAAATTACC
TTAATGGGTGAAGTAAGAAAAGCTGATTGGCTATGAAGATGAAATTTTAGAATATGAAAA
ACAAATAATTTAAGAGAGCACTGAACTAAACTCTAAATAGTTATTAGAAACCAGTATATA
AAGTATACAAAATGAAAATTTATAAATAGAAAAAGATCAAAAATAAGAAGAAAATTAATT
TAAAAAGGTAATGGATCAAGAAAATCTTGAAAAAAGTAAAAATAATTTTAATAGGAATCA
ACAATTTTAAAATGATATAGATGAAGGTGATTTTTTAACAGATTAAATATAAGATATAGA
AGCAAACTTTATGTTTACTTATAGTATTAATTGGAAACCGAGAAAAGATGGAAACATTCC
TCTAAATAAATAAGTCTAATTTGTAAAAAAAATTACAATAACGCCATAAGAATTCATTGA
TTAAATCCTATAAAATAAATTTCTTAATTGA


>TTHERM_00585180(protein)
MEQQQTNLEYSPYIFEIESILEKRIHPKTGKTEFLVQWKQWPDDPTWEPAQNIQSFLNNN
NQKKKEDDSHSNLKQRKLQKIEDKVKRSEQANNQTQKLNDSLQYLDEQIQFLQNKYELFI
SDSETEQKKLIPDKISEIEPEQIENEENTNMMNNVQIEPIYKILDKQEVENTIYYLILFY
DEKLPQWVKQEKLIGYEDEILEYEKQIIQESTELNSKQLLETSIQSIQNENLQIEKDQKQ
EENQFKKVMDQENLEKSKNNFNRNQQFQNDIDEGDFLTDQIQDIEANFMFTYSINWKPRK
DGNIPLNKQVQFVKKITITPQEFIDQILQNKFLN