Identifiers and Description

Gene Model Identifier

TTHERM_00706300

Standard Name

RPS16 (Ribosomal Protein of the Small subunit 16)

Aliases

PreTt26886 | 111.m00107 | 3744.m00027

Description

RPS16 ribosomal protein S9; Homolog of yeast RPS16- human RPS16- bacterial RPS9;

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00380 ) ribosomal protein S9

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_17730.1	7.001881202137212e-149
	Description: ribosomal protein S9 containing protein (225 aa)
SGD	YMR143W	4.997966074691795e-65
	Description: RPS16A Protein component of the small (40S) ribosomal subunit; identical to Rps16Bp and has similarity to E. coli S9 and rat S16 ribosomal proteins
DictyBase	DDB_G0284093	5.0012639607461234e-61
	Description: rps16 on chromosome: 4 position 1558362 to 1559293
WormBase	WBGene00004485	4.000223764421475e-57
	Description: locus:rps-16 40S ribosomal protein S16 status:Confirmed UniProt:Q22054 protein_id:CAB01658.1
Oxytricha	Contig21935.0.g16	6.997794455893953e-54
	Description: Ribosomal protein S9/S16
Stentor Coeruleus	SteCoe_8987	3.221340285992516e-27
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00706300(coding)
ATGAAATATAATAATTCTTAGCAAAATAGAATGAAAAAAGATGAGAGAACTACTAAGTTT
AATAAAGACTAAATTAATTAAGGCGAATTAATTTTTAGATAGGAAGGAAAGGATAATAAA
AAGTAAAAGGGAAAAATAAAGGACTAATTCAAAGATACTGTTGGAAGGTCGAAAGCATAA
TTAAAAGAAAAAAGGATAAAAATTAATCTAAAATCAAATATAAAAAACAAAGACATAAGT
AAAGAAATGAGCCAATAAAAGCCTCAATTAGTCCAAACTTTCGGCAGAAAGAAAAACGCC
GTCGCTGTTGCCTCCGTCAGACCTGGTAAGGGTCTCCTCAAGGTCAACGGTTCCCCCATT
GATATGATCAACCCCTAGATCCTCCAAGCTAAGATCTACGAACCCATCCTCTTACTCGGT
CAATAGAAGTTCGCTAACCTCGACATTAGAATCAGAGTTAGAGGTTCTGGTTACACCTCT
TAAGTCTATGCCATCAGACAAGCTCTCTCCAAGGGTATCGTTGCTTACCACGCTAAATAC
GTCGATGAAAACTCCAAGAGAGAAATCAAGGAATAATTGATGCAATACGACAGATCCCTC
TTGGTTGCCGATCCCAGAAGAATGGAACCCAAGAAGTGTGGTGGTAGAGGTGCCAGATCT
AAAATGCAAAAGGCTTACAGATGA

>TTHERM_00706300(gene)
ATGAAATATAATAATTCTTAGCAAAATAGAATGAAAAAAGATGAGAGAACTACTAAGTTT
AATAAAGACTAAATTAATTAAGGCGAATTAATTTTTAGATAGGAAGGAAAGGATAATAAA
AAGTAAAAGGGAAAAATAAAGGACTAATTCAAAGATACTGTTGGAAGGTCGAAAGCATAA
TTAAAAGAAAAAAGGATAAAAATTAATCTAAAATCAAATATAAAAAACAAAGACATAAGT
AAAGAAATGAGCCAATAAAAGCCTCAATTAGTCCAAACTTTCGGCAGAAAGAAAAACGCC
GTCGCTGTTGCCTCCGTCAGACCTGGTAAGGGTCTCCTCAAGGTCAACGGTTCCCCCATT
GATATGATCAACCCCTAGATCCTCCAAGCTAAGATCTACGAACCCATCCTCTTACTCGGT
CAATAGAAGTTCGCTAACCTCGACATTAGAATCAGAGTTAGAGGTTCTGGTTACACCTCT
TAAGTCTATGCCATCAGACAAGCTCTCTCCAAGGGTATCGTTGCTTACCACGCTAAGTAA
TTAAACAATATCATTTATTTAGAAATGTTTTGAAATGCAAACGAGATTGATTGATTGATT
AATTGACTGATCATTTACCATTCAATAAAAAATCAATACAATTTTGCTCCTTTTAGCATT
CTTATTAAATCCAGATTAAAATAAAAAAGATAAAAGTCATTTTTATTACCATCAATCATA
ATTTTATTATTTAACTCAATATTTTTACGGGAATGCGCATGTAGTTTGCTACAAATTACT
CAAAAAGGAAAATAATAACTAACTATTAGCTTGAATTTAGATTAGTAGATATCTATAAAT
ATAAAGCAAATCTAGCAGTTTAGTTGAATTTAATCAGCTAATAAGTTAACAAATCTAGGC
AAAGAACTTTCAAATATTAATATACTAATATAGAGGTTCTAAAAATAAAGGAATTACAAA
TGTATTTCTTAGATACTCTTGCAAAATCTAATAGCAAGGTTAGGAAACGAAGAATAACAA
AAAATAAAGCATAGTAAACTCCTAAAATAATTGATATTCTGGATAAGATTCATAAATATT
TATCAATAGCGATAAAAGAGCAAATGATAGAGCAATTATTCAGAAATTTATAAAAAAACA
AAAGGAAAATTAAAATTATTAAACTAATAAGGAGTTAGTATGATGTAAATAAGTCTAAAA
AGGATAGCTTGAGTAATTTAAAAAGCTGCTACTTAAAATTTTTTAGGATCCAAAGAAAAG
TTTATGTTTGAGTTAAATAAATAAATAGCTAATTACAAGGCAAATTACTCAATAAATGTA
TCATAAATCTTAAATAAGATTATTGTTCAAAGCAAATAACGAGTATTTTAAAATTATGAA
AGATTGATTGGTTTTAAATCTGCAATAAAAGCTAAGGAGAAGTTTAGCAAATTTTATAAA
AAAAAAACATATTTTAAATTTTCAAAACTCATTATTTATTTTTTGATTTACTAACTAACT
TACTAATTAAAAAATTTAGATACGTCGATGAAAACTCCAAGAGAGAAATCAAGGAATAAT
TGATGCAATACGACAGATCCCTCTTGGTTGCCGATCCCAGAAGAATGGAACCCAAGAAGT
GTGGTGGTAGAGGTGCCAGATCTAAAATGCAAAAGGCTTACAGATGA

>TTHERM_00706300(protein)
MKYNNSQQNRMKKDERTTKFNKDQINQGELIFRQEGKDNKKQKGKIKDQFKDTVGRSKAQ
LKEKRIKINLKSNIKNKDISKEMSQQKPQLVQTFGRKKNAVAVASVRPGKGLLKVNGSPI
DMINPQILQAKIYEPILLLGQQKFANLDIRIRVRGSGYTSQVYAIRQALSKGIVAYHAKY
VDENSKREIKEQLMQYDRSLLVADPRRMEPKKCGGRGARSKMQKAYR