Identifiers and Description

Gene Model Identifier

TTHERM_00723010

Standard Name

RAB38 (RAB GTPase 38)

Aliases

PreTt18061 | 116.m00086 | 3671.m00010

Description

RAB38 small guanosine triphosphatase family Ras-related in brain (Rab) family protein; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF01926 ) GTPase of unknown function
• ( PF08477 ) Miro-like protein
• ( TIGR00231 ) small GTP-binding protein domain
• ( TIGR02432 ) tRNA(Ile)-lysidine synthetase

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_14782.1	2.0006174947921314e-117
	Description: Ras family protein (216 aa)
WormBase	WBGene00004273	1.0002124404074584e-26
	Description: locus:rab-10 status:Confirmed UniProt:Q94148 protein_id:CCD70773.1
DictyBase	DDB_G0272138	2.0009605191578312e-25
	Description: rab2B on chromosome: 2 position 1483407 to 1484594
SGD	YOR089C	5.00094715178354e-25
	Description: VPS21 Rab family GTPase required for endocytic transport and for sorting of vacuolar hydrolases; localized in endocytic intermediates; detected in mitochondria; geranylgeranylation required for membrane association; mammalian Rab5 homolog
Oxytricha	Contig15751.0.0.g87	1.999790113608142e-24
	Description: Ras family
Stentor Coeruleus	SteCoe_759	0.00000000000009357622968840175
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00723010(coding)
ATGAACAATCATTAGTCTAGTTCATCTAACACAAAGATTATTATAGTTGGAGCAGGAGGA
ATTGGCAAATCAACTTTCATTTAGTATTATGTTAATGGAAAGTACCTTGTCCCAAACTCA
ACAGTTTTATGCGATTTCTTTGTGAAATAAGTTAAATACAAAAGCGAGTAGATAAGATTA
GAAATATGGGATACAGCTGGATAGCCATAATTTTAAAATTTAATTAGTCAGTTTTATAGA
AATACAAGTGCTGCAATACTTGCTTTTGATATTAATAACATTGAGTCATTACGTAAACTT
GATTTTTACTTTAATGATCTCAATAACTAACTAGGTTAGGATGTCATTAAGGTAATTATA
TCAACCAGATGTGATTTAAAGGGTATGAAATATGATGAAAAAAACAACCCAATTAAAGCT
GTAAGTGATGAAGAAATAAATTAATATGTGAAGGAAAAGGGTCTAAAATATTTTGAAACA
TCTTCTAAAGCAGATATAGGAGTAAAAGATACCTTCAATTATATAATCGAAGAAATCTTA
AAAAAGCAATCAATCGTAGGAACTGATAATACTCCAAACAATAATATTTCTCTTATAGAA
TAAAATTAATCACAAAAACCTCAGTAAAAAAAAGAGGGATGCTGCTCAAGTTGA

>TTHERM_00723010(gene)
ATGAACAATCATTAGTCTAGTTCATCTAACACAAAGATTATTATAGTTGGAGCAGGAGGA
ATTGGCAAATCAACTTTCATTTAGTATTATGTTAATGGAAAGTACCTTGTCCCAAACTCA
ACAGTTTGTAATCCATAATTCATTAATAGTTTCTAATAGCTAATATTAATCACTTTTTTT
TATATTTGAAAGTATGCGATTTCTTTGTGAAATAAGTTAAATACAAAAGCGAGTAGATAA
GATTAGAAATATGGGATACAGCTGGATAGCCATAATTTTAAAATTTAATTAGTCAGTTTT
ATAGAAATACAAGTGCTGCAATACTTGCTTTTGATATTAATAACATTGAGTCATTACGTA
AACTTGATTTTTACTTTAATGATCTCAATAACTAACTAGGTTAGGATGTCATTAAGGTAA
TTATATCAACCAGATGTGATTTAAAGGGTATGAAATATGATGAAAAAAACAACCCAATTA
AAGCTGTAAGTGATGAAGAAATAAATTAATATGTGAAGGAAAAGGGTCTAAAATATTTTG
AAACATCTTCTAAAGCAGATATAGGAGTAAAAGATACCTTCAATTATATAATCGAAGAAA
TCTTAAAAAAGCAATCAATCGTAGGAACTGATAATACTCCAAACAATAATATTTCTCTTA
TAGAATAAAATTAATCACAAAAACCTCAGTAAAAAAAAGAGGGATGCTGCTCAAGTTGA

>TTHERM_00723010(protein)
MNNHQSSSSNTKIIIVGAGGIGKSTFIQYYVNGKYLVPNSTVLCDFFVKQVKYKSEQIRL
EIWDTAGQPQFQNLISQFYRNTSAAILAFDINNIESLRKLDFYFNDLNNQLGQDVIKVII
STRCDLKGMKYDEKNNPIKAVSDEEINQYVKEKGLKYFETSSKADIGVKDTFNYIIEEIL
KKQSIVGTDNTPNNNISLIEQNQSQKPQQKKEGCCSS