Identifiers and Description

Gene Model Identifier

TTHERM_00773790

Standard Name

RAD50 (Homolog of budding yeast Rad50)

Aliases

PreTt04470 | 128.m00148 | 3676.m00073

Description

RAD50 DNA repair protein RAD50 putative; Required for the formation and repair of meiotic double-strand breaks

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00005 ) ABC transporter, ATP-binding protein
  • ( PF00038 ) Intermediate filament protein
  • ( PF01576 ) Myosin tail
  • ( PF02370 ) M protein repeat
  • ( PF02463 ) RecF/RecN/SMC N terminal domain
  • ( PF02609 ) exodeoxyribonuclease VII, small subunit
  • ( PF04702 ) Vicilin N terminal region
  • ( PF06696 ) Streptococcal surface antigen repeat
  • ( PF08946 ) Osmosensory transporter coiled coil
  • ( TIGR00606 ) rad50
  • ( TIGR00611 ) DNA replication and repair protein
  • ( TIGR01166 ) cobalt ABC transporter, ATP-binding protein
  • ( TIGR02169 ) chromosome segregation protein SMC
  • ( TIGR03185 ) DNA sulfur modification protein DndD

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_17705.1 9.997093137033517e-262
Description: hypothetical protein (1304 aa)
Oxytricha Contig17805.0.g2 2.9989272749380808e-50
Description: AAA domain
SGD YNL250W 1.000499495426459e-47
Description: RAD50 Subunit of MRX complex, with Mre11p and Xrs2p, involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining
DictyBase DDB_G0292786 6.002397656030775e-43
Description: rad50 on chromosome: 6 position 2029933 to 2034102
WormBase WBGene00004296 6.99697739292434e-35
Description: locus:rad-50 DNA repair protein rad-50 status:Confirmed UniProt:O44199 protein_id:CAB01581.1
Stentor Coeruleus SteCoe_18411 4.248354255291589e-18
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00773790(coding)
ATGTCTTACTTAAAAAAGCTAGGAATTTACGGAATCAGAAGTTATGGGGATTAAAACAGT
GAAAAGTATGAAGAAATAGCCTTCTTTAAACCTTTAACTCTGATTTTAGGTAACAACGGA
GCTGGCAAGTCAACTATAATAGAATGCTTAAAACTAATCACTACTGGTTCTTTTCCTCCA
AACTCTGACAAAGGAAAAACATTTATTAAGGATCCAAGATTGATGGGTTCAAATGAGAGT
TAGGGGTCAATTTCGTTAATTTTCAAGGCTATTAATCAAAAATAAATATTAGTTAGAAGA
CTATTCTAGGTAAAAAAAGAAAAGAGTGGAAAATTTACATTTGATTCGAAAGATGCTACG
ATTAAAGTTAGAGATAAGAATACAGGAAAGGATATCTCTGTAGATCATAAATGTTTAGAA
ATTGAAAAATAAGTCCCACAGTTATTAGGTGTTAGTAAAGCTGTTTTTGAAAATGTTATC
TTTTGTCACTAAGATGAAAGTCTTTGGCCATTTGGTGACAGTGCAACATTAAAAAGTATT
TTCGATGAACTTTTCGATACTAAACAATTCACAAAACTTTAAGAAACTTTGCATAAGTAA
CAGAAAGAAATTAAAAAAGAAGCTTCAGAAACGAAAATTAATTTGTAGCACTACAAGCAA
AGATATGATGAGGCTGTTTCTCAGAAATAGTTGATTGCAAAAGAAGCAGAAGATTTACTC
TAAGCTACTGTAGATCTTGAAAAAATGAGAAACGAATATAATTTGTTTAATAAAGGAATT
GAAGATGAAGAAACAGTCAGAATAAGGATAGAAAACTTAAATAAAGATATTTGCAATTGT
AATTGGAACAAAAATGAAATGGAAAAATAGTAGAAATAAATATTAAGTAGCTGCAGTAGA
CACTATTTTTTAGGTGAAGATATTGATACACTAAAAAAAATATAAGATCATCTTAAGAAA
GAAAACTAAGATTTGAAGATAAAGAAAGAGGAAATTGAAGAAAGTATTGAAACAGAAAAA
AGGGATTTAGATAAGTTGAAGTATGAAATAGAAAATTTGAAATCATCAGATAAGAATACT
AAATAAGTTCATTAAGATCTCAAAAACATTAAATAAAAATTAAATGAAATTATGCATAAA
TCTATTGATTCTGATGAGATTATGCTGAAAGAGGCTAACCAATATAAAGATTAAATAGAA
TCAGAATATAAAACATTATCATTTTCTTTAAAAAACTCTGTACAGGAATATCAAGATACT
ATTCACTAAACATAGCAAAATTTACAAAAACTTTAAGTAAGGTAAGCTGAACTTAAAGAA
AAAAAAAAGCACTCTCAAAAGAGAATTGAATAGCTTTAAGAAGAAATTGGAAAACTAAAA
TCTTCAAACACTCAAAAAAATTTAGAAGAGTCAATTTAATTATTGGAGGTGTCTAAAAAA
AATAGTGAACAATATAACTTAAAGATATAAGAATACTAAGACTAAATAGATAATATTAGA
TAGCAAAATTCTGGATTAGCAAAATAAATTGAAATTATTAACTCATAGTCTAAAATGCAA
AGTAAATATTTAGAGCTAAAATAAATGACAAGCTAGTTTGATGAAATAAATAAAACTATG
GAGGTTTAGCAAAAAGAATACGAATAATATTAAATTTCACAAGACGAACATTTGAGTGAG
CAAAGAAAGTAATGCATGGGTGAAATAAGTAGCTTAAAGTAGCAAAAATCGAAACTTGAG
TCAGAAATTTCGAAATTAGAAGGTAGAATAGAGCTAAATGAAGACATAGAAACAGCTTTT
GAATTAAAACTAAATCAAATAACTTAAACTTTTAAAGAAAGTAATTTACTCGATATTATT
GCTTAAGACAATAATGCAGATTTTGATACAAAATACTAATCAATTAAAGAAGAAATAGAA
GAATTAAAAAATAGCATTATTGAAAAGCAAACTTGCTTATTAATTGATAAATAAGTTCTA
AATTATTGCACTGAGAAGAAAAAGTGCAAATTTTGTAAAAGTGATGTTAATGAAGATAAT
ATATCCAAAATAACTAAATCCTAAGAAGATAGATCAAGAAAAGCAGAAAAAGATATACAA
GAGCGTATTGCCCTTAAAGAATAAAAAATATTTGAGAAAAAATAATTGAAAAAACTCAAG
GAATAGTACGTTTAGTATAATGAATTGAGGGCTAAATAAAAAAAGAATAACTCTGAGATT
AAAGAGATATAAATTCAGGTTAAAGAACTACAAGAGCAATTATAAAATTTAGTCAATTAA
CTTATTAATAAAGAAGCTCAATTAGCTAAACTAGAAAAAGCACATACTATTTAAAGTGAA
ATCATTAAAACATAAAGATAAATTTATAACTTGAAGAATAAAATTCAGAAATTTTAAGTT
GAAAATCCTGAATTACTAAATATTGATAATTAAAATATTATACCACCAGAAAAAGTTGAA
GAAATCCATAAAAACTATAAGCAAAATAACTAAAGGTTAGAGTCTTTGAACAGCCTGCTT
ATTTAAGAAAATAACAAAAAAGCGAACTCTAATGCTAGTTTTCAATAAGCAGAAGTGTTA
AGAAAAAACTGCTAAAATAAGCTAAAAGAAGAACAAGAGCAAATTCAAAGAAACACAAAA
GATATTAAAGATTATGAATAATAAAATTAAACATCTCTCACTGAACTATAAAATATTGAA
AAAGATATAGAATCATAAAACAAATTATTATAAGAGCTTAAAAAAAATGTAAGTGAATAA
ACACAAGAGCTTTAGAAAGTTTAATAAACTTACGACTAATCCAAAATACTGATTGGCGAA
TACCTTCCTAAATACGAAAAGACCTATACAGAATATAAAGAACTTAAGCAAGCCAAAGGA
AAGTAAAAAAGTAAATTATAAGAAAATTAAATCGCTTAATTAGAAAAGGAGTATGCTATC
AAGGAAAAATCGAAATAATAAAATGAAGAAGAACTAGTAAAGATTATAGAGTAACTGAAA
GAACAGACTGAAGAATTTGACAATCTTACAAAAGGTATCTAATATCTAGAACTTGGTGTT
TCTATATCTTAGGTGGAAAAAGAGTTAGCTCAAAATGAACAACTTCTCAAAGAATAGTAA
GCAATTTTAGAGAAAATCTAACAATAAACGAGAGCAGGATATGATAAAATACAAAAAATA
AAAGCTTTTGAAGAAACCTGCAAATATAGAAAATAAGCTTTAGAAAAAAATTATGCAGAG
GCAATAGCCAGATATGATCAGGCTGAAGAAAGATATTGTAGAGCACTAGTTGAGTTAGAA
GTAAAAAATGGATTGCTAAAAGACATCTAAGAATACTTAGAGGAGCTTGATAAAACACTA
ATTAACTATCATAAGGATAAGATGGAATAAATTAATAAATGCATTGCAGATACTTGGAAA
AAAATTTATTAAGGCTAAGATATTGTTAAAGTTGAGATCAAAGCAGAAGAAGCAGAAGGA
AGAGGCAAAAAAATATATAACTATAGAATTGTTATGTTTATCTACGACGAAAAGGATAAA
GATCTCAAAGAGATAGATATGAAAGGCAGATGTAGTGCTGGTTAAAAAGTTCTTGCTTCA
ATCATTATTAGGTTAGCATTAGCTGAAGCATTTACTATGAATTGTGGTATCCTTGCACTT
GATGAGCCTACAACAAATCTTGATAAGCTTCATGCCTAAAAATTGGGAGAGCAACTATGT
GAACTTATAGAGTCCAGAAAAGGATAATCGTCTTTCCAACTTATCATAATTTCACATGAT
AAAGATTTTATTCATTTAATGTAGCAGAGATAACATTGTAGTGACTTCTACTACGTATAT
AAGGAAAATGGATGTTCTCTAATTGAAAGAAGAACTTATAAAAATGCTTTGATGAACAAG
TAAACAGATTGA


>TTHERM_00773790(gene)
ATGTCTTACTTAAAAAAGCTAGGAATTTACGGAATCAGAAGTTATGGGGATTAAAACAGT
GAAAAGTATGAAGAAATAGCCTTCTTTAAACCTTTAACTCTGATTTTAGGTAACAACGGA
GCTGGCAAGTCAGTAATATTTTTATTTTTTAATAATTTAACAAAGTTAACTTAAACTTAT
TTAGACTATAATAGAATGCTTAAAACTAATCACTACTGGTTCTTTTCCTCCAAACTCTGA
CAAAGGAAAAACATTTATTAAGGATCCAAGATTGATGGGTTCAAATGAGAGTTAGGGGTC
AATTTCGTTAATTTTCAAGGCTATTAATCAAAAATAAATATTAGTTAGAAGACTATTCTA
GGTAATTTTAAATAATAATTCTTAATCAACAACTAAAATAAGTATTTTATACAAGGTAAA
AAAAGAAAAGAGTGGAAAATTTACATTTGATTCGAAAGATGCTACGATTAAAGTTAGAGA
TAAGAATACAGGAAAGGATATCTCTGTAGATCATAAAGTATAAATAAAATATATAATTTT
GACTTATCTTATAAATAATTTTATTTATTTTTAAGTGTTTAGAAATTGAAAAATAAGTCC
CACAGTTATTAGGTGTTAGTAAAGCTGTTTTTGAAAATGTTATCTTTTGTCACTAAGATG
AAAGTCTTTGGCCATTTGGTGACAGTGCAACATTAAAAAGTATTTTCGATGAACTTTTCG
ATACTAAACAGTAATACAAATAAAAATAATTAATTTTTTTTTCTTTAATATTTCACAATC
TTAGAATATACTTAATTAAATAATAAAAAGATTCACAAAACTTTAAGAAACTTTGCATAA
GTAACAGAAAGAAATTAAAAAAGAAGCTTCAGAAACGAAAATTAATTTGTAGCACTACAA
GCAAAGATATGATGAGGCTGTTTCTCAGAAATAGTTGATTGCAAAAGAAGCAGAAGATTT
ACTCTAAGCTACTGTAGATCTTGAAAAAATGAGAAACGAATATAATTTGTTTAATGTAAT
TTATTTAAAATTTTAAAATAAGTAAAAAAGCTTTATTTTTGATTTTAGAAAGGAATTGAA
GATGAAGAAACAGTCAGAATAAGGATAGAAAACTTAAATAAAGATATTTGCAATTGTAAT
TGGAACAAAAATGAAATGGAAAAATAGTAGAAATAAATATTAAGTAGCTGCAGTAGACAC
TATTTTTTAGGTGAAGATATTGATACACTAAAAAAAATATAAGATCATCTTAAGAAAGAA
AACTAAGATTTGAAGATAAAGAAAGAGGAAATTGAAGAAAGTATTGAAACAGAAAAAAGG
GATTTAGATAAGTTGAAGTATGAAATAGAAAATTTGAAATCATCAGATAAGAATACTAAA
TAAGTTCATTAAGATCTCAAAAACATTAAATAAAAATTAAATGAAATTATGCATAAATCT
ATTGATTCTGATGAGATTATGCTGAAAGAGGCTAACCAATATAAAGATTAAATAGAATCA
GAATATAAAACATTATCATTTTCTTTAAAAAACTCTGTACAGGAATATCAAGATACTATT
CACTAAACATAGCAAAATTTACAAAAACTTTAAGTAAGGTAAGCTGAACTTAAAGAAAAA
AAAAAGCACTCTCAAAAGAGAATTGAATAGCTTTAAGAAGAAATTGGAAAACTAAAATCT
TCAAACACTCAAAAAAATTTAGAAGAGTCAATTTAATTATTGGAGGTGTCTAAAAAAAAT
AGTGAACAATATAACTTAAAGATATAAGAATACTAAGACTAAATAGATAATATTAGATAG
CAAAATTCTGGATTAGCAAAATAAATTGAAATTATTAACTCATAGTCTAAAATGCAAAGT
AAATATTTAGAGCTAAAATAAATGACAAGCTAGTTTGATGAAATAAATAAAACTATGGAG
GTTTAGCAAAAAGAATACGAATAATATTAAATTTCACAAGACGAACATTTGAGTGAGCAA
AGAAAGTAATGCATGGGTGAAATAAGTAGCTTAAAGTAGCAAAAATCGAAACTTGAGTCA
GAAATTTCGAAATTAGAAGGTAGAATAGAGCTAAATGAAGACATAGAAACAGCTTTTGAA
TTAAAACTAAATCAAATAACTTAAACTTTTAAAGAAAGTAATTTACTCGATATTATTGCT
TAAGACAATAATGCAGGTATTTAAAAAAAAAATATATAATTGTTTTCTAAAAAATAAATT
TTTTTACTATAGATTTTGATACAAAATACTAATCAATTAAAGAAGAAATAGAAGAATTAA
AAAATAGCATTATTGAAAAGCAAACTTGCTTATTAATTGATAAATAAGTTCTAAATTATT
GCACTGAGAAGAAAAAGTGCAAATTTTGTAAAAGTGATGTTAATGAAGATAATATATCCA
AAATAACTAAATCCTAAGAAGATAGATCAAGAAAAGCAGAAAAAGATATACAAGAGCGTA
TTGCCCTTAAAGAATAAAAAATATTTGAGAAAAAATAATTGAAAAAACTCAAGGAATAGT
ACGTTTAGTATAATGAATTGAGGGCTAAATAAAAAAAGAATAACTCTGAGATTAAAGAGA
TATAAATTCAGGTTAAAGAACTACAAGAGCAATTATAAAATTTAGTCAATTAACTTATTA
ATAAAGAAGCTCAATTAGCTAAACTAGAAAAAGCACATACTATTTAAAGTGAAATCATTA
AAACATAAAGATAAATTTATAACTTGAAGAATAAAATTCAGAAATTTTAAGTTGAAAATC
CTGAATTACTAAATATTGATAATTAAAATATTATACCACCAGAAAAAGTTGAAGAAATCC
ATAAAAACTATAAGCAAAATAACTAAAGGTTAGAGTCTTTGAACAGCCTGCTTATTTAAG
AAAATGTAATTTAATTATTATTTAATTTTAATTAAATATTATTAATTTATAGAACAAAAA
AGCGAACTCTAATGCTAGTTTTCAATAAGCAGAAGTGTTAAGAAAAAACTGCTAAAATAA
GCTAAAAGAAGAACAAGAGCAAATTCAAAGAAACACAAAAGATATTAAAGATTATGAATA
ATAAAATTAAACATCTCTCACTGAACTATAAAATATTGAAAAAGATATAGAATCATAAAA
CAAATTATTATAAGAGCTTAAAAAAAATGTAAGTGAATAAACACAAGAGCTTTAGAAAGT
TTAATAAACTTACGACTAATCCAAAATACTGATTGGCGAATACCTTCCTAAATACGAAAA
GACCTATACAGAATATAAAGAACTTAAGCAAGCCAAAGGAAAGTAAAAAAGTAAATTATA
AGAAAATTAAATCGCTTAATTAGAAAAGGAGTATGCTATCAAGGAAAAATCGAAATAATA
AAATGAAGAAGAACTAGTAAAGATTATAGAGTAACTGAAAGAACAGACTGAAGAATTTGA
CAATCTTACAAAAGGTATCTAATATCTAGAACTTGGTGTTTCTATATCTTAGGTGGAAAA
AGAGTTAGCTCAAAATGAACAACTTCTCAAAGAATAGTAAGCAATTTTAGAGAAAATCTA
ACAATAAACGAGAGCAGGATATGATAAAATACAAAAAATAAAAGCTTTTGAAGAAACCTG
CAAATATAGAAAATAAGCTTTAGAAAAAAATTATGTAAAACTTTTAAATTTTTAAATTAA
TAAAAAATTAAAATTATATATTAGGCAGAGGCAATAGCCAGATATGATCAGGCTGAAGAA
AGATATTGTAGAGCACTAGTTGAGTTAGAAGTAAAAAATGGATTGCTAAAAGACATCTAA
GAATACTTAGAGGAGCTTGATAAAACACTAATTAACTATCATAAGGATAAGATGGAATAA
ATTAATAAATGCATTGCAGATACTTGGAAAGTAAAAATACTAAAAGCAAATAATTTATTA
AATTTATTTTATTTTAGAAAATTTATTAAGGCTAAGATATTGTTAAAGTTGAGATCAAAG
CAGAAGAAGCAGAAGGAAGAGGCAAAAAAATATATAACTATAGAATTGTTATGTTTATCT
ACGAGTAAATAAATAAATAACTTACTTATTTACTTTCTTTCTTTATTCCTAATTTTTAAT
TTATAAAATATTTTAAAAAGCGAAAAGGATAAAGATCTCAAAGAGATAGATATGAAAGGC
AGATGTAGTGCTGGTTAAAAAGTTCTTGCTTCAATCATTATTAGGTTAGCATTAGCTGAA
GCATTTACTATGAATTGTGGTATCCTTGCACTTGATGAGCCTACAACAAATCTTGATAAG
CTTCATGCCTAAAGTAAATAATATTTTCGTTAACATTCTAAACTTATAAAATATTTTTTA
GAATTGGGAGAGCAACTATGTGAACTTATAGAGTCCAGAAAAGGATAATCGTCTTTCCAA
CTTATCATAATTTCACATGATAAAGATTTTATTCATTTAATGTAGCAGAGATAACATTGT
AGTGACTTCTACTACGTATATAAGGTAAATTTCATAATTTTATAATAAAACAAAATATTG
AATGATATTCTAATAAATATAAAATAAGGAAAATGGATGTTCTCTAATTGAAAGAAGAAC
TTATAAAAATGCTTTGATGAACAAGTAAACAGATTGA


>TTHERM_00773790(protein)
MSYLKKLGIYGIRSYGDQNSEKYEEIAFFKPLTLILGNNGAGKSTIIECLKLITTGSFPP
NSDKGKTFIKDPRLMGSNESQGSISLIFKAINQKQILVRRLFQVKKEKSGKFTFDSKDAT
IKVRDKNTGKDISVDHKCLEIEKQVPQLLGVSKAVFENVIFCHQDESLWPFGDSATLKSI
FDELFDTKQFTKLQETLHKQQKEIKKEASETKINLQHYKQRYDEAVSQKQLIAKEAEDLL
QATVDLEKMRNEYNLFNKGIEDEETVRIRIENLNKDICNCNWNKNEMEKQQKQILSSCSR
HYFLGEDIDTLKKIQDHLKKENQDLKIKKEEIEESIETEKRDLDKLKYEIENLKSSDKNT
KQVHQDLKNIKQKLNEIMHKSIDSDEIMLKEANQYKDQIESEYKTLSFSLKNSVQEYQDT
IHQTQQNLQKLQVRQAELKEKKKHSQKRIEQLQEEIGKLKSSNTQKNLEESIQLLEVSKK
NSEQYNLKIQEYQDQIDNIRQQNSGLAKQIEIINSQSKMQSKYLELKQMTSQFDEINKTM
EVQQKEYEQYQISQDEHLSEQRKQCMGEISSLKQQKSKLESEISKLEGRIELNEDIETAF
ELKLNQITQTFKESNLLDIIAQDNNADFDTKYQSIKEEIEELKNSIIEKQTCLLIDKQVL
NYCTEKKKCKFCKSDVNEDNISKITKSQEDRSRKAEKDIQERIALKEQKIFEKKQLKKLK
EQYVQYNELRAKQKKNNSEIKEIQIQVKELQEQLQNLVNQLINKEAQLAKLEKAHTIQSE
IIKTQRQIYNLKNKIQKFQVENPELLNIDNQNIIPPEKVEEIHKNYKQNNQRLESLNSLL
IQENNKKANSNASFQQAEVLRKNCQNKLKEEQEQIQRNTKDIKDYEQQNQTSLTELQNIE
KDIESQNKLLQELKKNVSEQTQELQKVQQTYDQSKILIGEYLPKYEKTYTEYKELKQAKG
KQKSKLQENQIAQLEKEYAIKEKSKQQNEEELVKIIEQLKEQTEEFDNLTKGIQYLELGV
SISQVEKELAQNEQLLKEQQAILEKIQQQTRAGYDKIQKIKAFEETCKYRKQALEKNYAE
AIARYDQAEERYCRALVELEVKNGLLKDIQEYLEELDKTLINYHKDKMEQINKCIADTWK
KIYQGQDIVKVEIKAEEAEGRGKKIYNYRIVMFIYDEKDKDLKEIDMKGRCSAGQKVLAS
IIIRLALAEAFTMNCGILALDEPTTNLDKLHAQKLGEQLCELIESRKGQSSFQLIIISHD
KDFIHLMQQRQHCSDFYYVYKENGCSLIERRTYKNALMNKQTD