Identifiers and Description

Gene Model Identifier

TTHERM_00780530

Standard Name

CSKB1 (CaSein Kinase Beta subunit 1)

Aliases

PreTt01265 | 130.m00075 | 3738.m00011

Description

Casein kinase II (CKII) regulatory beta subunit; Tetrahymena CKII-complex appears to have two alpha subunits and one regulatory beta subunit (Nabeel-Shah et al., 2023). Associated with transcription factor interaction in DNA repair pathway of macronucleus.

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Domains

  • ( PF01214 ) Casein kinase II regulatory subunit

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_18649.1 9.997093137033517e-262
Description: hypothetical protein (261 aa)
Oxytricha Contig1990.0.g4 4.000179013191958e-98
Description: Casein kinase II regulatory subunit
DictyBase DDB_G0284601 5.9995872346509964e-61
Description: csnk2b on chromosome: 4 position 2209637 to 2210617
WormBase WBGene00002196 7.001890014428386e-55
Description: locus:kin-10 Casein kinase II subunit beta status:Confirmed UniProt:P28548 protein_id:CAB00053.1
SGD YOR039W 9.999142814001536e-47
Description: CKB2 Beta regulatory subunit of casein kinase 2 (CK2), a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerase
Stentor Coeruleus SteCoe_31065 1.1089390193121365e-40
Description: None

General Information

No. Gene Name(s) Paragraph Text
164 CSKB1 CKII subunits including CSKA1, CSKA2, and CSKB1 co-purified with Cac2 subunit of putative CAF1-complex in Tetrahymena. Tetrahymena appears to contain a single putative homolog of the two regulatory beta subunits of CKII that are found in humans. Affinity purification followed by mass spectrometry (AP-MS) analysis of TTHERM_00780530 (CSKB1) identified a large number of proteins to co-purify, suggesting that CKII clients might include functionally diverse proteins in Tetrahymena (Nabeel-Shah et al., 2023).

Associated Literature

  1. Ref:37024975: Nabeel-Shah S, Garg J, Ashraf K, Jeyapala R, Lee H, Petrova A, Burns JD, Pu S, Zhang Z, Greenblatt JF, Pearlman RE, Lambert JP, Fillingham J (2023) Multilevel interrogation of H3.3 reveals a primordial role in transcription regulation. Epigenetics & chromatin 16:10

Sequences

>TTHERM_00780530(coding)
ATGTCAGAGGACTCATAATATTCTGATCTTCCTGGTGGTTGGATTAGCTGGTTTTGTGCT
CTTGAGGATCACTAATTTTTATGTGAAGTTGATGATGATTACATCAGAGATAACTTTAAT
CTTTATGGAATTAAGCAAAAGTTCAATCACTACAACGATACTATTGAAATGATTTTATCC
AGTGAAAGTCCCGATGATGATGATCTTGAAGATGAAAGATTTTTAGAAATCTACTAGGAA
GCAACTGACGTTTATGGTTTAATTCACGCTCGTTTCATTACTTCCCCAAAAGGATTAGCT
TTAATGAGAGAAAAGTTCTTGTTGGGCCGTTTCGGAGTTTGTCCTAGAGTACTTTGTGAA
AGACAAAATGTCTTACCTGTTGGTATGAGTGAAGAGCTTAGAACATCCAGAGTCAAAGTT
TATTGCCCTCGTTGTGAAGATGTATATATTCCTAAGAAAAAATGTCCTGATATCGATGGA
TGTTATTTCGGTGTTTCCTTCCCTCAAATCCTTCTTATGACATACCCTGATTTAGTCCCA
TCAAGAAACAATTCCACTTATATTCCTAGAATTTACGGTTTCAGAATATACAAGAAAAAG
GGATCTAAGTTCCTTGAAGAAGAAAACCCTTTGGTAGAAGTAACACATTATAGTGAAGAG
CTATTAAGACAAATAAGGGGAAAAGTTGATAAAAAAAATGAAGAAAAGAAAGCATTAACC
AACTCAACAACTGCTTAGAGTTACGGAAATACCTAAAATAATAACGCCAATCAAATGAAT
AACTGA


>TTHERM_00780530(gene)
ATGTCAGGTACTTTAAAATAATTTTTTAGCTTTTTTGTTTACTTAGGACCACTAATTATA
GCGAAACGCTAAAAGAATGTTTAAAAGCAAAACAAAATAGCCTTGCTTATTAAGCAAAAT
ATAAAATACAATAGTTTGACTTTCATTTAAAATTAATTTGCATTATAAATAAAATAGAGG
ACTCATAATATTCTGATCTTCCTGGTGGTTGGATTAGCTGGTTTTGTGCTCTTGAGGATC
ACTAATTTTTATGTGAAGTTGATGATGATTACATCAGAGATAACTTTAATCTTTATGGAA
TTAAGCAAAAGTTCAATCACTACAAGTAAAAAAGATATCCAAAATAGATCTGTTTCACTT
CTTTTTTGATAATTTGATTTAAGTTCTCAAATTTTTCAAACATAATTAATAGTCACTAAA
TAAGAAAAGAATTATGAAAAAAGAGATATTTTAAAGCTTTTATTAGAATAAAATTATTAA
ATTAAAAGTCTTTATTACCCATTAATAATCATTTTATTAAACAGCGATACTATTGAAATG
ATTTTATCCAGTGAAAGTCCCGATGATGATGATCTTGAAGATGAAAGGTAATTAATACAA
AAATTGTTTATTTTTAATAGCAAAAACAAAATATTTATTTTAAATGATTGAATAGCTTTT
AGCTAATACTTAGTAAATTAACTGTAGCTATTTTGTTTATATAAGTTTTTAAAGATAGCC
TAATATAAATAGATATTTATTGAAGTTATTTAATCAAAAAAACTGTTAAGATTTTTAGCA
TATTATCAAAAGATTAAAAAAATATTTAATCGAATTATCTTTTCTTAAAATATAGATTTT
TAGAAATCTACTAGGAAGCAACTGACGTTTATGGTTTAATTCACGCTCGTTTCATTACTT
CCCCAAAAGGTATTTTTGAAATTATTTTATTTTAACAATTAAAATATAGATTTAGATATC
ATTAAAGCTAGCAAGCAAGCCAGTTTAACTAAAGATTTAATTTATTTAGCTGCATTCTAA
AATAAAAAAATTTGAACTTTATTCAAATTATTTAAGAAAGATAAATTACATACAATAAAT
AATAGACTATTTATTTATTTATTTATTTATTTCTACTGTTCCTTCTATTTAATTTAATAC
AATAAAATAGTTAACTAATTTATTTATTTTATGTTACAGGATTAGCTTTAATGAGAGAAA
AGTTCTTGTTGGGCCGTTTCGGAGTTTGTCCTAGAGTACTTTGTGAAAGACAAAATGTCT
TACCTGTTGGTATGAGTGAAGAGCTTAGAACATCCAGAGTCAAAGTAATAAAATTAACTT
AAATTAAATTAAGCTATTATTGAATGAGTAGCATTTATTTTGCAAATATATTTTATTATT
TATGTGGCTAACTTAAAAATTAATTTTTGTTTCAAATTAATAGGTTTATTGCCCTCGTTG
TGAAGATGTATATATTCCTAAGAAAAAATGTCCTGATATCGATGGATGTTATTTCGGTGT
TTCCTTCCCTCAAATCCTTCTTATGGTAATTAAAACTTTAGATGATAAAGATAGCATTTA
ATTAAACATTTAAAATTTATTATAAAAGACATACCCTGATTTAGTCCCATCAAGAAACAA
TTCCACTTATATTCCTAGAATTTACGGTTTCAGAATATACAAGAAAAAGGGATCTAAGTT
CCTTGAAGAAGAAAACCCTTTGGTAGAAGTAACACATTATAGTGAAGAGCTATTAAGACA
AATAAGGGGAAAAGTTGATAAAAAAAATGAAGAAAAGAAAGCATTAACCAACTCAACAAC
TGCTTAGAGTTACGGAAATACCTAAAATAATAACGCCAATCAAATGAATAACTGA


>TTHERM_00780530(protein)
MSEDSQYSDLPGGWISWFCALEDHQFLCEVDDDYIRDNFNLYGIKQKFNHYNDTIEMILS
SESPDDDDLEDERFLEIYQEATDVYGLIHARFITSPKGLALMREKFLLGRFGVCPRVLCE
RQNVLPVGMSEELRTSRVKVYCPRCEDVYIPKKKCPDIDGCYFGVSFPQILLMTYPDLVP
SRNNSTYIPRIYGFRIYKKKGSKFLEEENPLVEVTHYSEELLRQIRGKVDKKNEEKKALT
NSTTAQSYGNTQNNNANQMNN