Identifiers and Description

Gene Model Identifier

TTHERM_00840040

Standard Name

HMGB7 (high mobility group box protein 7)

Aliases

PreTt17819 | 146.m00120 | 3743.m00049

Description

high mobility group (HMG)-box protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• DNA binding (IEA) | GO:0003677

Domains

• ( PF00505 ) HMG (high mobility group) box
• ( PF03789 ) ELK domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_19532.1	1.9992560499818233e-109
	Description: hypothetical protein (538 aa)
Oxytricha	Contig851.1.g13	0.00010003404299092957
	Description: HMG (high mobility group) box
WormBase	WBGene00001972	0.0007003012208360162
	Description: locus:hmg-1.2 High mobility group protein 1.2 status:Confirmed UniProt:Q09390 protein_id:CCD83371.1
Stentor Coeruleus	SteCoe_14619	0.0009118819655545162
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:31932604: Nabeel-Shah S, Ashraf K, Saettone A, Garg J, Derynck J, Lambert JP, Pearlman RE, Fillingham J (2020) Nucleus-specific linker histones Hho1 and Mlh1 form distinct protein interactions during growth, starvation and development in Tetrahymena thermophila. Scientific reports 10(1):168

Sequences

>TTHERM_00840040(coding)
ATGATAAAAGGGATATTTTTTAACAGTAAAAATATTTTTTAAAGTAATTCAAAACTTTTT
TAAGTAGTATGCACTTATTAGTATAGGAAAAAAACTATTCCTGTTCCTTACCCTTTCTAA
GAAAGGTTTGATGTATTGGATGGATAATACTTAGTCCCTAAGCCTCCTCTCAAGCCCTTA
AGTGCTTATAATGTTTTCACATTAATGTATATGAGGATTATTAGAGAAAATTATCCAAAT
GAACCTACATCAGTTATATTAAAAAAACTTAGCAGTTTATGGAATGATGATGAGTTTATG
ATAGACCATAAACTAGAAGTGCTAAATTTGATTAAATATTAAAATTATTAGTATTACAAT
GAAATGCTTTATTATAAAAAGATTTATGCTAAACCTAAATTGCCGCTTTCTTCTTTTCAG
ATCTATTTAAAAGAAAGATATATTTAAGTTAAAGAAGAATTATAAACTTCAGATATTGCC
ACTATCACGTAGCATGTTACTTATGAGTGGAGCTAATTGACTGAAGAGTAAAAATAAGAA
TATTAACAAAAATATAAAGATAATATTGTATATTTTAAAACTGCTATCTCAGAATATGAT
AACACCTTTAGAATTCCTATGAAGCAATATAAAAATATATATAATTTATTTGTAATAGAA
TAATATTAAGGTAAAAAAATAAAGTTCAAAAGCTTAGAAGAGCACTAAAAGTTTACTAAA
CAATTGCAAGTTATGTTTAATTAGCTAACACCTTAAGAAAAGCAATTTTATGAATAAAAA
AAAATACAATTAGATGAACAAATAAACTAAGAAGCAGAAAAATTCAAGAAATATTTTGAT
CTATCAGAATAGGATTACTAAGATATATAAAAATTAGTAAAATCTTAATCAAAAATCAAA
GATATAAACGAAGATCCTCAAATAGCCTTCATGTGA

>TTHERM_00840040(gene)
ATGATAAAAGGGATATTTTTTAACAGTAAAAATATTTTTTAAAGTAATTCAAAACTTTTT
TAAGTAGTATGCACTTATTAGTATAGGAAAAAAACTATTCCTGTTCCTTACCCTTTCTAA
GAAAGGTTTGATGTATTGGATGGATAATACTTAGTCCCTAAGCCTCCTCTCAAGCCCTTA
AGTGCTTATAATGTTTTCACATTAATGTATATGAGGATTATTAGAGAAAATTATCCAAAT
GAACCTACATCAGTTATATTAAAAAAACTTAGCAGTTTATGGAATGATGATGAGTTTATG
ATAGACCATAAACTAGAAGTGCTAAATTTGATTAAATATTAAAATTATTAGTATTACAAT
GAAATGCTTTATTATAAAAAGATTTATGCTAAACCTAAATTGCCGCTTTCTTCTTTTCAG
ATCTATTTAAAAGAAAGATATATTTAAGTTAAAGAAGAATTATAAACTTCAGATATTGCC
ACTATCACGTAGCATGTTACTTATGAGTGGAGCTAATTGACTGAAGAGTAAAAATAAGAA
TATTAACAAAAATATAAAGATAATATTGTATATTTTAAAACTGCTATCTCAGAATATGAT
AACACCTTTAGAATTCCTATGAAGCAATATAAAAATATATATAATTTATTTGTAATAGAA
TAATATTAAGGTAAAAAAATAAAGTTCAAAAGCTTAGAAGAGCACTAAAAGTTTACTAAA
CAATTGCAAGTTATGTTTAATTAGCTAACACCTTAAGAAAAGCAATTTTATGAATAAAAA
AAAATACAATTAGATGAACAAATAAACTAAGAAGCAGAAAAATTCAAGAAATATTTTGAT
CTATCAGAATAGGATTACTAAGATATATAAAAATTAGTAAAATCTTAATCAAAAATCAAA
GATATAAACGAAGATCCTCAAATAGCCTTCATGTGA

>TTHERM_00840040(protein)
MIKGIFFNSKNIFQSNSKLFQVVCTYQYRKKTIPVPYPFQERFDVLDGQYLVPKPPLKPL
SAYNVFTLMYMRIIRENYPNEPTSVILKKLSSLWNDDEFMIDHKLEVLNLIKYQNYQYYN
EMLYYKKIYAKPKLPLSSFQIYLKERYIQVKEELQTSDIATITQHVTYEWSQLTEEQKQE
YQQKYKDNIVYFKTAISEYDNTFRIPMKQYKNIYNLFVIEQYQGKKIKFKSLEEHQKFTK
QLQVMFNQLTPQEKQFYEQKKIQLDEQINQEAEKFKKYFDLSEQDYQDIQKLVKSQSKIK
DINEDPQIAFM