Identifiers and Description

Gene Model Identifier

TTHERM_01050580

Standard Name

RRM50 (RNA recognition motif-containing protein 50)

Aliases

PreTt27801 | 212.m00059

Description

RRM50 hypothetical protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
• ( PF00515 ) tetratricopeptide repeat
• ( PF07719 ) tetratricopeptide repeat
• ( TIGR00741 ) ribosomal subunit interface protein
• ( TIGR00864 ) polycystin cation channel protein
• ( TIGR01563 ) phage head-tail adaptor, putative
• ( TIGR01612 ) rhoptry protein
• ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_01463.1	9.997093137033517e-262
	Description: hypothetical protein (754 aa)
Oxytricha	Contig655.1.g20	0.000009999254677478949
	Description: RNA recognition motif (a_k_a_ RRM, RBD, or RNP domain)

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01050580(coding)
ATGCAACTAAAGTAGTCTTAAAAGGAGTAGATTAGAAATATCATCAATTCTAAGCTTTCC
AATAGCAAGAGAGGAGATGAAATATCCTCTTAAGTTGAAGATAAGGTCATAGATTTGATT
GAGAGATAGAATTTCTAAAGCAAAGATAGTCTCCAAGATAAATTGTAAGGAGAATTAAAG
GACATTTTAAAAGAAAACGCTCATCATATTAGTGAATCAGTTTCTAAGGTAATTTATAGC
AGCAACTATGATAATAGTGGCAACTCTGCCTAAAAAGATGACGATTATGAACAAAATTTA
TACAAGAACAAATTCTACTCAGACCATTCGGATAATTCTGATGATGAAGACGACGATGAT
GATGATAGAAGAGACAAGAGAAAGAGAAATTTTAAGAAAAGACTTAGCATTTAGCAATCT
GATATATAAAGCGATAACGAAAATAAAAGTTTGAGAAGCGACTCAGAAGGAAGAGAAGGA
AATAAAAGGGTTAGCAGAAAAGATAGCTATGCTAGTAATCATAGTGGGAAGAGAGATTAA
AATAAGGATGAAAAAGACTCTCATTATAATTCAAAATAAAACTATAACTAGAACAATGGA
AAATACCAAAACAATAAATACAACAATAATAATAGTAGGTTTAAAAATGATAAAAAAAAT
TTAAATAACAATGGAAACAATAAAAGATTAAGTAATGGACCAGCAGCTCCTTTACCAACT
TTCATGAGTATGAATAATGGAGGAATCATTCCAAATTTACTTACTAATAATCCTATGATG
AATTATCCCATGCCTAATAGTCTAAATTTAATGCAACCTTTTAGCGGTATATTCAATCCA
AGAGTAGGTCCTCCTGCACCTCCTACAGGAAAACCAGTCATCTCTTAAGCTGGTACTGGT
GCTCCTTCTATAACTCTATCAAAATCTAAAAATATTATTTATGTCTTTTACATACCACCT
AAATTGAATAATGTTACTAAAATTAGTTAGTATTTCACAAATAAATTTGGAGCTGTTTCA
GCTTATGACAAAATTGATGAAACCACTGCTTCAATAAAATTTGAAAAAGAAGAATCTGCT
TAAAAGGCAGTAGATTCAAAAGAAAAGCCATTCAGAATAGAATAAATTGTTGTAACTTTT
ACTAGAAGCCCAGCTCCTCCCAAACCAGCATTTGTGAACAAAGGCAATAATTAAAACAAT
AATTAAAATGGTGGAAAATCCACCTTGCATAGGAAGCCTAGCATCGATGGATCAGAACCT
GCCAAATAAAAATTCATAAAAAATGAAAACAACAACAGTACCACTTTTAACAACAACAAC
AACAATAATAATAATAGCAACATCAACAACTAAAAACCTAAGCTAGCAATTAATTTTGAG
CAGAAGAAAAAGCAAAAGCAATTTGATGAACAAAAAAGATTAATTTAACTAAAATTTGCA
GATAAGCTTAAAGTGATGATATTCATAAAAAAAAGGGAATAAAATCCTGAAAGCGAAATC
CGTTAAGAAGTTCAAAAATCTATTGATTAAATTAAATAAGTCAAAGATGTACTATCAAAA
GTATAAACTCAAGAAGATCTTTAATAAGTAGAATAGCATGAATTAATCGTTGAAAATCAA
TATGAATTTGCTCAAAAAATACGTTTCTTAGAAGGAAAAGACATGAGTTTGACTGAGTTA
CGTCCTAAGTTACTTGAATATGGAAAAGTAGAAACTTTGAAGCCTCACATTATGGAAAAA
GCTGTTGATATATGTTTTAGCGATTTTGAATCATCAGAAAAAGCATACTTTGGATTACAA
GGACAATATAATATAGAGTTCATTCATTAGCATATTGTTAAATTTTTAAAAAATCCTTTC
TAACCTTAGGATGAAGCTTAAGAAGAATAAGAAGAAGGAGGAAATTAGTTAGATCAAAAT
ATTGAATACTAAGAAGATGAATAATAGGGAGATTAAATTTAACAAGATTAAGCAAACGAA
AATTAAGAATAGTAATACCAATACGATGAAAATAATGAGGAATACTATGAAAACTAAGAA
TAAGCTTAGGAGGGAGAAGAATACTAAGAGAATATTGCTGAATAAGATGAATAGCAATAA
TAATACTAAGAATTATAAGATAATTAGCAAATTCAAGAGGAGGACCAATAAGTTGATGAT
GATCTTTGA

>TTHERM_01050580(gene)
ATGCAACTAAAGTAGTCTTAAAAGGAGTAGATTAGAAATATCATCAATTCTAAGCTTTCC
AATAGCAAGTATAAAAAATTGTTTTCAAACATTCCTCTAAATTTAGTTTATTATTAAAAA
GGAGAGGAGATGAAATATCCTCTTAAGTTGAAGATAAGGTCATAGATTTGATTGAGAGAT
AGAATTTCTAAAGCAAAGATAGTCTCCAAGATAAATTGTAAGGAGAATTAAAGGACATTT
TAAAAGAAAGTAATAAGAAAAATTTGATTTTTTGAAAAATAAATTGTTTAGCTTGTGAAA
ATTTAATTTTTTACCTGTTTAACATTATTTTTTTATTTAATAATCTAATTAGACGCTCAT
CATATTAGTGAATCAGTTTCTAAGGTAATTTATAGCAGCAACTATGATAATAGTGGCAAC
TCTGCCTAAAAAGATGACGATTATGAACAAAATTTATACAAGAACAAATTCTACTCAGAG
TAATTAATTCTATTCATGATATCTTTTCAGTTTAAAGAAAATTAATTATATAAATTGAAT
ATTTAGATTTTATAAAATGTTTATCATTTTTTATTCTTAAAATTTCAAATATATCTTTTT
TGAAACTTAGCCATTCGGATAATTCTGATGATGAAGACGACGATGATGATGATAGAAGAG
ACAAGAGAAAGAGAAATTGTAAATAAATAAAAATATTTTTTTTTTAAGCTAACTTTTGAT
AATTTGCATAATTAGTTAAGAAAAGACTTAGCATTTAGCAATCTGATATATAAAGCGATA
ACGAAAATAAAAGTTTGAGAAGCGACTCAGAAGGAAGAGAAGGAAATAAAAGGGTTAGCA
GAAAAGATAGCTATGCTAGTAATCATAGTGGGAAGAGAGATTAAAATAAGGATGAAAAAG
ACTCTCATTATAATTCAAAATAAAACTATAACTAGAACAATGGAAAATACCAAAACAATA
AATACAACAATAATAATAGTAGGTTTAAAAATGATAAAAAAAATTTAAATAACAATGGAA
ACAATAAAAGATTAAGTAATGGACCAGCAGCTCCTTTACCAACTTTCATGAGTATGAATA
ATGGAGGAATCATTCCAAATTTACTTACTAATAATCCTATGATGAATTATCCCATGCCTA
ATAGTCTAAATTTAATGCAACCTTTTAGCGGTATATTCAATCCAAGAGTAGGTCCTCCTG
CACCTCCTACAGGAAAACCAGTCATCTCTTAAGCTGGTACTGGTGCTCCTTCTATAACTC
TATCAAAATCTAAAAATATTATTTATGTCTTTTACATACCACCTAAATTGAATAATGTTA
CTAAAATTAGTTAGTATTTCACAAATAAATTTGGAGCTGTTTCAGCTTATGACAAAATTG
ATGAAACCACTGCTTCAATAAAATTTGAAAAAGAAGAATCTGCTTAAAAGGCAGTAGATT
CAAAAGAAAAGCCATTCAGAATAGAATAAATTGTTGTAACTTTTACTAGAAGCCCAGCTC
CTCCCAAACCAGCATTTGTGAACAAAGGCAATAATTAAAACAATAATTAAAATGGTGGAA
AATCCACCTTGCATAGGAAGCCTAGCATCGATGGATCAGAACCTGCCAAATAAAAATTCA
TAAAAAATGAAAACAACAACAGTACCACTTTTAACAACAACAACAACAATAATAATAATA
GCAACATCAACAACTAAAAACCTAAGCTAGCAATTAATTTTGAGCAGAAGAAAAAGCAAA
AGCAATTTGATGAACAAAAAAGATTAATTTAACTAAAATTTGCAGATAAGCTTAAAGTGA
TGATATTCATAAAAAAAAGGGAATAAAATCCTGAAAGCGAAATCCGTTAAGAAGTTCAAA
AATCTATTGATTAAATTAAATAAGTCAAAGATGTACTATCAAAAGTATAAACTCAAGAAG
ATCTTTAATAAGTAGAATAGCATGAATTAATCGTTGAAAATCAATATGAATTTGCTCAAA
AAATACGTTTCTTAGAAGGAAAAGACATGAGTTTGACTGAGTTACGTCCTAAGTTACTTG
TAAAATATGAAAGATGTTATTTTTATTTAAACTTTAATTATTATTGTTTAGGAATATGGA
AAAGTAGAAACTTTGAAGCCTCACATTATGGAAAAAGCTGTTGATATATGTTTTAGCGAT
TTTGAATCATCAGAAAAAGTAAATAGATTAACAAATTTAGACCATTGATAAATAAATTAA
TTAATATTTAATAGATTTTTATTTTTTTGTTATTAATTTTTAGGCATACTTTGGATTACA
AGGACAATATAATATAGAGTTCATTCATTAGCATATTGTTAAATTTTTAAAAAATCCTTT
CTAACCTTAGGATGAAGCTTAAGAAGAATAAGAAGAAGGAGGAAATTAGTTAGATCAAAA
TATTGAATACTAAGAAGATGAATAATAGGGAGATTAAATTTAACAAGATTAAGCAAACGA
AAATTAAGAATAGTAATACCAATACGATGAAAATAATGAGGAATACTATGAAAACTAAGA
ATAAGCTTAGGAGGGAGAAGAATACTAAGAGAATATTGCTGAATAAGATGAATAGCAATA
ATAATACTAAGAATTATAAGATAATTAGCAAATTCAAGAGGAGGACCAATAAGTTGATGA
TGATCTTTGA

>TTHERM_01050580(protein)
MQLKQSQKEQIRNIINSKLSNSKRGDEISSQVEDKVIDLIERQNFQSKDSLQDKLQGELK
DILKENAHHISESVSKVIYSSNYDNSGNSAQKDDDYEQNLYKNKFYSDHSDNSDDEDDDD
DDRRDKRKRNFKKRLSIQQSDIQSDNENKSLRSDSEGREGNKRVSRKDSYASNHSGKRDQ
NKDEKDSHYNSKQNYNQNNGKYQNNKYNNNNSRFKNDKKNLNNNGNNKRLSNGPAAPLPT
FMSMNNGGIIPNLLTNNPMMNYPMPNSLNLMQPFSGIFNPRVGPPAPPTGKPVISQAGTG
APSITLSKSKNIIYVFYIPPKLNNVTKISQYFTNKFGAVSAYDKIDETTASIKFEKEESA
QKAVDSKEKPFRIEQIVVTFTRSPAPPKPAFVNKGNNQNNNQNGGKSTLHRKPSIDGSEP
AKQKFIKNENNNSTTFNNNNNNNNNSNINNQKPKLAINFEQKKKQKQFDEQKRLIQLKFA
DKLKVMIFIKKREQNPESEIRQEVQKSIDQIKQVKDVLSKVQTQEDLQQVEQHELIVENQ
YEFAQKIRFLEGKDMSLTELRPKLLEYGKVETLKPHIMEKAVDICFSDFESSEKAYFGLQ
GQYNIEFIHQHIVKFLKNPFQPQDEAQEEQEEGGNQLDQNIEYQEDEQQGDQIQQDQANE
NQEQQYQYDENNEEYYENQEQAQEGEEYQENIAEQDEQQQQYQELQDNQQIQEEDQQVDD
DL