Identifiers and Description

Gene Model Identifier

TTHERM_00494030

Standard Name

ATG5 (AuTophaGy 5)

Aliases

PreTt04240 | 61.m00227 | 3711.m00074

Description

ATG5 autophagy protein Apg5; Autophagy protein; involved in programmed nuclear degradation (autophagy)

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Molecular Function

Domains

  • ( PF04106 ) Autophagy protein Apg5

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_13000.1 9.001310321615282e-163
Description: hypothetical protein (320 aa)
Oxytricha Contig14975.0.g34 2.0004286606204839e-16
Description: Autophagy protein Apg5
SGD YPL149W 0.000000009996807949091551
Description: ATG5 Conserved protein involved in autophagy and the Cvt pathway; undergoes conjugation with Atg12p to form a complex involved in Atg8p lipidation; conjugated Atg12p also forms a complex with Atg16p that is essential for autophagosome formation
WormBase WBGene00022152 0.0000007997233352734267
Description: locus:atg-5 status:Confirmed protein_id:CDM63580.1
DictyBase DDB_G0289881 0.0000020007268868677913
Description: atg5 on chromosome: 5 position 3433996 to 3435424

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:22366125: Liu ML, Yao MC (2012) Role of ATG8 and autophagy in programmed nuclear degradation in Tetrahymena thermophila. Eukaryotic cell 11(4):494-506

Sequences 

>TTHERM_00494030(coding)
ATGGCAGAGGAACAAAAATAAACAGATTTTGAAAGAGATTAAAAAGAAATTAGGTCTTTA
ATATGGCAAAATAAAATCCCTGTTAAAATTAAATTAGACCCAGAACAAAATAGCAATAAT
GAGGAACCATTTCCTCTTTATATGTTCTTTTAAAGAGTTCACCTACCAGTATTTTATTAT
GAATAAATTCATGAGTACTTTGAAAAATTTGCTCCTGTTCCAAGAAATTAGGATGATATA
TGGTTAGAATGGAATAATAAACCAATTGCTTGGAATTTACCCTTTGGAGTGACTTTTGAT
TTAAATTATTAGGACCCATCTATGAAAGGAGAATTAGGTGATGATGATAGTTTTGATTTA
GGAATTTAAGAAATTCCTCCACCATTTATTCCTTAAAATATAATCTTGCATTATGGTCCT
TGCACTATTTCTAATGACTATACTCCTATTCCAAGCATCCCTGGCAAAACCGTATTAGAT
ATAGCAAAAAAAAGTTTTAGGTTTGCCCTTAAAGAATCACTTCATATTAGATTTGATAGC
GATACTATTCTTATGTAAATGGAAGCAGAAAAATAAAACGAATTATGGGAATCTTATAAA
AACCTCAACCAAAACACCTTTTTTAGCATTTTAGATTAGATATTTTAGTTGAAAAATCAT
TTGTAAAATAACAAAGCAATTAAATTGCCTGTAAGAGTGTATATAGAAGGTTATATAGGT
CGTATATAACTCTCTCATCAAATAGATTCTGAAAATGATACTTTAGGCGATTTTCTAACA
AAATATTTCCCTAAAATTTTAAAATAAACAGATACTGCCTTTGAAATAATTAATGATAAT
TACAAAAACTTCAAAGTAATATGCAATGGAATTGTTTGTAACTTAAACATGCCTTTACTT
TACTTTTACAAATATTTCTCTCATTATGATGGCTTCACTTATCTATGTATATAAAAATGA


>TTHERM_00494030(gene)
ATGGCAGAGGAACAAAAATAAACAGATTTTGAAAGAGATTAAAAAGAAATTAGGTCTTTA
ATATGGCAAAATAAAATCCCTGTTAAAATTAAATTAGACCCAGAACAAAATAGCAATAAT
GAGGAACCATTTCCTCTTTATATGTTCTTTTAAAGAGTTCACCTACCAGTATTTTATTAT
GAATAAATTCATGAGTACTTTGAAAAATTTGCTCCTGTTCCAAGAAATTAGGATGATATA
TGGTTAGAATGGAATAATAAACCAATTGCTTGGAATTTACCCTTTGGAGTGACTTTTGAT
TTAAATTATTAGGACCCATCTATGAAAGGAGAATTAGGTGATGATGATAGTTTTGATTTA
GGAATTTAAGAAATTCCTCCACCATTTATTCCTTAAAATATAATCTTGCATTATGGTCCT
TGCACTATTTCTAATGACTATACTCCTATTCCAAGCATCCCTGGCAAAACCGTATTAGAT
ATAGCAAAAAAAAGTTTTAGGTTTGCCCTTAAAGAATCACTTCATATTAGATTTGATAGC
GATACTATTCTTATGTAAATGGAAGCAGAAAAATAAAACGAATTATGGGAATCTTATAAA
AACCTCAACCAAAACACCTTTTTTAGCATTTTAGATTAGATATTTTAGTTGAAAAATCAT
TTGTAAAATAACAAAGCAATTAAATTGCCTGTAAGAGTGTATATAGAAGGTTATATAGGT
CGTATATAACTCTCTCATCAAATAGATTCTGAAAATGATACTTTAGGCGATTTTCTAACA
AAATATTTCCCTAAAATTTTAAAATAAACAGATACTGCCTTTGAAATAATTAATGATAAT
TACAAAAACTTCAAAGTAATATGCAATGGAATTGTTTGTAACTTAAACATGCCTTTACTT
TACTTTTACAAATATTTCTCTCATTATGATGGCTTCACTTATCTATGTATATAAAAATGA


>TTHERM_00494030(protein)
MAEEQKQTDFERDQKEIRSLIWQNKIPVKIKLDPEQNSNNEEPFPLYMFFQRVHLPVFYY
EQIHEYFEKFAPVPRNQDDIWLEWNNKPIAWNLPFGVTFDLNYQDPSMKGELGDDDSFDL
GIQEIPPPFIPQNIILHYGPCTISNDYTPIPSIPGKTVLDIAKKSFRFALKESLHIRFDS
DTILMQMEAEKQNELWESYKNLNQNTFFSILDQIFQLKNHLQNNKAIKLPVRVYIEGYIG
RIQLSHQIDSENDTLGDFLTKYFPKILKQTDTAFEIINDNYKNFKVICNGIVCNLNMPLL
YFYKYFSHYDGFTYLCIQK