Identifiers and Description

Gene Model Identifier

TTHERM_00649100

Standard Name

RRM62 (RNA recognition motif-containing protein 62)

Aliases

PreTt09224 | 94.m00142 | 3677.m00050

Description

RRM62 U2 snRNP auxiliary factor small subunit

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Domains

  • ( PF00642 ) Zinc finger C-x8-C-x5-C-x3-H type (and
  • ( PF08648 ) Protein of unknown function (DUF1777)

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_17866.1 9.997316819378982e-180
Description: zinc finger protein (330 aa)
Oxytricha Contig706.0.g82 1.0003926095686843e-81
Description: Zinc finger C-x8-C-x5-C-x3-H type (and similar)
DictyBase DDB_G0285077 9.997652352281279e-57
Description: u2af1 on chromosome: 4 position 2799520 to 2801698
WormBase WBGene00006698 8.000462645699572e-47
Description: locus:uaf-2 status:Confirmed UniProt:Q9U2U0 protein_id:CAB55137.1
Stentor Coeruleus SteCoe_33425 2.4426007377405277e-36
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00649100(coding)
ATGTTTGATTTTTTATTTGTTTGTTTCTTTGAGAGGGGAAAGAAAAAAGAGAAAAGAGAA
AAATATTAATATAATTATTTAATAATCAAAGAAAAGTAAAGAGAAAAGACTTAAATCTTA
GAAAAGCGGTAGAAAAAGGAAGTCTATAGACAATATCTAAATAAACTAAGTTAAGGTATA
AATTTTAGTTAGCTAGCTTATTAGTAAAGGAAAGCAAAGAAAGCAAGTAAGGTAGTAAAA
GTTAGTTAGTAGTAGAAGTAGTAAGGTTAATAGTAAAAGTAAGTAAATAAGTAAGTTTAA
GTTTTAGAAATGGCTGAGAAATTAAGTCGTATGTATGGTACAGAAGAAGACAAGGTCAAT
TGTCCCTTCTACTTTAAAATTGGTGCTTGCAGATATGAAAATAAATGTCTCAGAATCCAC
AACAGACCCTCTGAGAGTTAGACTATCTTGATTAAGCACATGTACTAGAACTCCCCCACT
GAGTTGGCTTTGGCTTAGGGTAATAGAGTCAGCGAAGAAGAAGCTTAGAAGGCTTTGAAT
CACTACGAAGAATTTTATGAGGAAGTCTTTTTGGAGTTAGCAAGTTACGGAGAAATTGAT
GACTTGATCATTTGTGATAACATCGGTGATCACATGAAAGGAAACGTTTACGTTAAATAT
GTTAGGGAAAGCGAAGCTCTTAAGTGCTTGATGTCCTTAAAGACTCGTTATTACGACAAG
CAACAGCTCCAACCTGAATTCTCTCCCGTTACTGATTTCTCTAATGCAAAATGCAAACAA
TATATTGAAGGTCAGTGCAAAAGAAGTGGATACTGTAATTACATTCACTCTAAGCCTATC
GGTAGACCATTCAGAAGATCCCTTTTCAGATAAATGTACGAAGAGCATCCTGAATACAAG
AACAGGTCTCGCTCTCGCTCTAGATCAGATGATGATGAGAGATCTAAAAAGAAAAGAAAG
GATAAGGAAAGATCTGAAAAACATGAAAAAGACTCCAAAAAGAAGCATTCTCGTTCCAGA
AGCTCCCATAAAAAGCACAAGAAAGATAAAGATAAAAAGAAGAAGAAGTCTAGATCTCAC
TCCAAGCATTCTAAGTCAGCTTCTCCTGGCTACAAAAACTCTGAAGAAAGAAGAGCTGAT
ATCGCAAAGTGGGGCGAGGAAGATGATGAAGAAGACATGAAAGTCAATGCAAGCGGTTCA
GTCAACAATAATGGAACCACCAGCAATAACGAATAAAGCGACAGCAATAACAAGCAAGGC
ACTCACGATTATTTAGCCTAGCTTGTTAAGCCATAGAATTGA


>TTHERM_00649100(gene)
ATGTTTGATTTTTTATTTGTTTGTTTCTTTGAGAGGGGAAAGAAAAAAGAGAAAAGAGAA
AAATATTAATATAATTATTTAATAATCAAAGAAAAGTAAAGAGAAAAGACTTAAATCTTA
GAAAAGCGGTAGAAAAAGGAAGTCTATAGACAATATCTAAATAAACTAAGTTAAGGTATA
AATTTTAGTTAGCTAGCTTATTAGTAAAGGAAAGCAAAGAAAGCAAGTAAGGTAGTAAAA
GTTAGTTAGTAGTAGAAGTAGTAAGGTTAATAGTAAAAGTAAGTAAATAAGTAAGTTTAA
GTTTTAGAAATGGCTGAGAAATTAAGTCGTATGTATGGTACAGAAGAAGACAAGGTCAAT
TGTCCCTTCTACTTTAAAATTGGTGCTTGCAGATATGAAAATAAATGTCTCAGAATCCAC
AACAGACCCTCTGAGAGTTAGACTATCTTGATTAAGCACATGTACTAGAACTCCCCCACT
GAGTTGGCTTTGGCTTAGGGTAATAGAGTCAGCGAAGAAGAAGCTTAGAAGGCTTTGAAT
CACTACGAAGAATTTTATGAGGAAGTCTTTTTGGAGTTAGCAAGTTACGGAGAAATTGAT
GACTTGATCATTTGTGATAACATCGGTGATCACATGAAAGGAAACGTTTACGTTAAATAT
GTTAGGGAAAGCGAAGCTCTTAAGTGCTTGATGTCCTTAAAGACTCGTTATTACGACAAG
CAACAGCTCCAACCTGAATTCTCTCCCGTTACTGATTTCTCTAATGCAAAATGCAAACAA
TATATTGAAGGTCAGTGCAAAAGAAGTGGATACTGTAATTACATTCACTCTAAGCCTATC
GGTAGACCATTCAGAAGATCCCTTTTCAGATAAATGTACGAAGAGCATCCTGAATACAAG
AACAGGTCTCGCTCTCGCTCTAGATCAGATGATGATGAGAGATCTAAAAAGAAAAGAAAG
GATAAGGAAAGATCTGAAAAACATGAAAAAGACTCCAAAAAGAAGCATTCTCGTTCCAGA
AGCTCCCATAAAAAGCACAAGAAAGATAAAGATAAAAAGAAGAAGAAGTCTAGATCTCAC
TCCAAGCATTCTAAGTCAGCTTCTCCTGGCTACAAAAACTCTGAAGAAAGAAGAGCTGAT
ATCGCAAAGTGGGGCGAGGAAGATGATGAAGAAGACATGAAAGTCAATGCAAGCGGTTCA
GTCAACAATAATGGAACCACCAGCAATAACGAATAAAGCGACAGCAATAACAAGCAAGGC
ACTCACGATTATTTAGCCTAGCTTGTTAAGCCATAGAATTGA


>TTHERM_00649100(protein)
MFDFLFVCFFERGKKKEKREKYQYNYLIIKEKQREKTQILEKRQKKEVYRQYLNKLSQGI
NFSQLAYQQRKAKKASKVVKVSQQQKQQGQQQKQVNKQVQVLEMAEKLSRMYGTEEDKVN
CPFYFKIGACRYENKCLRIHNRPSESQTILIKHMYQNSPTELALAQGNRVSEEEAQKALN
HYEEFYEEVFLELASYGEIDDLIICDNIGDHMKGNVYVKYVRESEALKCLMSLKTRYYDK
QQLQPEFSPVTDFSNAKCKQYIEGQCKRSGYCNYIHSKPIGRPFRRSLFRQMYEEHPEYK
NRSRSRSRSDDDERSKKKRKDKERSEKHEKDSKKKHSRSRSSHKKHKKDKDKKKKKSRSH
SKHSKSASPGYKNSEERRADIAKWGEEDDEEDMKVNASGSVNNNGTTSNNEQSDSNNKQG
THDYLAQLVKPQN