Identifiers and Description

Gene Model Identifier

TTHERM_00939110

Standard Name

RFC1 (Homolog of Replication factor C subunit 1)

Aliases

PreTt03760 | 170.m00089

Description

RFC1 BRCT domain protein; BRCA1 C Terminus (BRCT) domain; AAA+ ATpase with a BRCT domain at the N-terminus (Cryptosporidium parvum)

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• glutathionylspermidine synthase activity (IEA) | GO:0008885
• rhamnulokinase activity (IEA) | GO:0008993
• thymidine phosphorylase activity (IEA) | GO:0009032

Biological Process

• C-terminal protein methylation (IEA) | GO:0006481
• response to auxin (IEA) | GO:0009733

Domains

• ( PF00004 ) ATPase, AAA family
• ( PF00533 ) BRCA1 C Terminus (BRCT) domain
• ( PF03047 ) COMC family
• ( PF03215 ) Rad17 cell cycle checkpoint protein
• ( PF04702 ) Vicilin N terminal region
• ( PF08243 ) SPT2 chromatin protein
• ( PF08519 ) Replication factor RFC1 C terminal
• ( TIGR02397 ) DNA polymerase III, subunit gamma

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_19334.1	9.997093137033517e-262
	Description: BRCT domain-containing protein (1154 aa)
Oxytricha	Contig2682.0.g45	1.9999788875029746e-125
	Description: Replication factor RFC1 C terminal domain
WormBase	WBGene00004337	1.999618694399617e-70
	Description: locus:rfc-1 status:Confirmed UniProt:Q18841 protein_id:CAA99812.1
SGD	YOR217W	7.000846320060671e-65
	Description: RFC1 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon
DictyBase	DDB_G0285961	2.998990600740728e-62
	Description: rfc1 on chromosome: 4 position 3845828 to 3850119
Stentor Coeruleus	SteCoe_1680	7.667648073722e-53
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00939110(coding)
ATGAAAAAGAATAACTAGTCAAATAGTTTATTGAAATATTTTAGTAAATAAGATACCAAA
ACTGTTAATAATTCGTAAAATTCTTCTAAAGACAAAGACAAAGAAAAAGATTCTAAAGAA
AAAACAAAAGAATCTTCATCTAAAACTTAATACAAATAAACTAAGGAAATAAAGCATGAA
GAACCTAAAAAATAAGAACAAAATAAGAAGCAAAATGAATAAAAGGAAGAAAAAGAAAAA
AGAAATTTTAGTTAAGATATAAAAAATACTCGATCAACTCCCATTAAAAAAGTTTAAGAG
TAGAAAAAAGAAGAAATAAAATCTTCTAAAAATAAAATGAATGTAGAGAATTCAGGAACT
GAAGAATTATCTGCCACTGAAAGTCTAACAGAACCTGCATTAAGCGAAAATGAGGAAAAA
AATAAATCTTCCAATCAAAATAAAGGGAGAAATGTTTCAAGTGATAATAAATAGTAATAA
GCGAAAGACGTAAAAATGAATTAAAGTTAGACAAGATCAAATGATAATAAAAAAGTAGAT
CCCAAGTAATCAAGTAAAAAGCCATAAAAGAAAAATGAGACTGATGACGATGATTACGGT
ATTAATGATGAAGAAGAGGACTTACCCAAAAATAGCAAACAAAAAAAATTAGTATAAGGG
AGCCAAAAAAAAATAAAATGA

>TTHERM_00939110(gene)
ATGAAAAAGAATAACTAGTCAAATAGTTTATTGAAATATTTTAGTAAATAAGATACCAAA
ACTGTTAATAATTCGTAAAATTCTTCTAAAGACAAAGACAAAGAAAAAGATTCTAAAGAA
AAAACAAAAGAATCTTCATCTAAAACTTAATACAAATAAAGTAAATTATTTTTTTAATGA
TGATATTCTTCTACTATTTTGAAATAAAGCTAAGGAAATAAAGCATGAAGAACCTAAAAA
ATAAGAACAAAATAAGAAGCAAAATGAATAAAAGGAAGAAAAAGAAAAAAGAAATTTTAG
TTAAGATATAAAAAATACTCGATCAACTCCCATTAAAAAAGTTTAAGAGTAGAAAAAAGA
AGAAATAAAATCTTCTAAAAATAAAATGAATGTAGAGAATTCAGGAACTGAAGAATTATC
TGCCACTGAAAGTCTAACAGAACCTGCATTAAGCGAAAATGAGGAAAAAAATAAATCTTC
CAATCAAAATAAAGGGAGAAATGTTTCAAGTGATAATAAATAGTAATAAGCGAAAGACGT
AAAAATGAATTAAAGTTAGACAAGATCAAATGATAATAAAAAAGTAGATCCCAAGTAATC
AAGTAAAAAGCCATAAAAGAAAAATGAGACTGATGACGATGATTACGGTATTAATGATGA
AGAAGAGGACTTACCCAAAAATAGCAAACAAAAAAAATTAGTATAAGGGAGCCAAAAAAA
AATAAAATGA

>TTHERM_00939110(protein)
MKKNNQSNSLLKYFSKQDTKTVNNSQNSSKDKDKEKDSKEKTKESSSKTQYKQTKEIKHE
EPKKQEQNKKQNEQKEEKEKRNFSQDIKNTRSTPIKKVQEQKKEEIKSSKNKMNVENSGT
EELSATESLTEPALSENEEKNKSSNQNKGRNVSSDNKQQQAKDVKMNQSQTRSNDNKKVD
PKQSSKKPQKKNETDDDDYGINDEEEDLPKNSKQKKLVQGSQKKIK