TGD | Tetrahymena Genome Database Wiki

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WASP

Panzica Updated Gene Info

WASP

Panzica Updated Alias

NMDP1

Naomi Updated Alias

Recent Papers

Femi-Oloye OP, Sutton RT, Gordon HD, Ain Das A, Morenikeji GO, Odorisio MK, Francestscu OD, Myers RL, Oloye FF (2024) An Assessment of Polycyclic Aromatic Hydrocarbons Using Estimation Programs. Toxics 12:
PUBMED:39195694

Wang S, Cheng X, Shi L, Liu K, Yang Z, Jia Q, Xiang X (2024) Insights into the response mechanisms of Tetradesmus obliquus to aged polylactic acid and tetracycline exposure via transcriptome analysis and physiological evaluations. Chemosphere :143120
PUBMED:39159767

Su H, Hao T, Yu M, Zhou W, Wu L, Sheng Y, Yi Z (2024) Complex evolutionary patterns within the tubulin gene family of ciliates, unicellular eukaryotes with diverse microtubular structures. BMC biology 22:170
PUBMED:39135200

BLAST Server at TGD

Click here for information about the BLAST process and help with advanced options.

BLAST Program

blastn - DNA query to DNA database
blastp - Protein query to protein database
blastx - Translated (6 frames) DNA query to protein database
tblastx - Translated (6 frames) DNA query to translated (6 frames) DNA database
tblastn - Protein query to DNA (6 frames) DNA database

Query Sequence Enter sequence below in FASTA format

Or load it from disk:
Set subsequence from to

Advanced Options

Filter for low copmlexity regions

Perform ungapped alignment

Expect
Matrix
Alignments

Query Genetic Codes (blastx only)
Database Genetic Codes (tblast[nx] only)

Other advanced options:

Wiki Links

External Links

Ciliate Genomics Consortium
Tetrahymena Stock Center
Tetrahymena Functional Genomics Database
Tetrahymena Wikipedia Page

Permission to use the information contained in this database was given by the researchers/institutes who contributed or published the information. Users of the database are solely responsible for compliance with any copyright restrictions, including those applying to the author abstracts. Documents from this server are provided "AS-IS" without any warranty, expressed or implied. The Ciliate.org project at Bradley University is supported by a grant from the National Center for Research Resources, part of the US National Institutes of Health.