TGD Genome Files


Latest Tetrahymena thermophila (Sheng, 2020)


Tetrahymena_thermophila_mic_assembly_v5.fasta
151452 KB - Modified: 09/14/2023
Tetrahymena_thermophila_protein_sequences_v5.fasta
16993 KB - Modified: 09/14/2023
Tetrahymena_thermophila_mic_genome_v5.gff3
16585 KB - Modified: 09/14/2023
Tetrahymena_thermophila_coding_sequences_v5.fasta
47827 KB - Modified: 09/14/2023
Tetrahymena_thermophila_mac_genome_v5.gff3
13500 KB - Modified: 09/14/2023
Tetrahymena_thermophila_mac_assembly_v5.fasta
102607 KB - Modified: 09/14/2023
Tetrahymena_thermophila_gene_sequences_v5.fasta
63921 KB - Modified: 09/14/2023

Other Tetrahymena Species (Hamilton, 2016)


Tetrahymena_malaccensis_mac_assembly_v1.fasta
105931 KB - Modified: 09/14/2023
Tetrahymena_malaccensis_protein_sequences_v1.fasta
17311 KB - Modified: 09/14/2023
Tetrahymena_malaccensis_mac_genome_v1.gff3
31207 KB - Modified: 09/14/2023
Tetrahymena_malaccensis_coding_sequences_v1.fasta
48373 KB - Modified: 09/14/2023
Tetrahymena_elliotti_mac_assembly_v1.fasta
90200 KB - Modified: 09/14/2023
Tetrahymena_elliotti_protein_sequences_v1.fasta
15517 KB - Modified: 09/14/2023
Tetrahymena_elliotti_mac_genome_v1.gff3
27672 KB - Modified: 09/14/2023
Tetrahymena_elliotti_coding_sequences_v1.fasta
43528 KB - Modified: 09/14/2023
Tetrahymena_borealis_mac_assembly_v1.fasta
92849 KB - Modified: 09/14/2023
Tetrahymena_borealis_protein_sequences_v1.fasta
15918 KB - Modified: 09/14/2023
Tetrahymena_borealis_mac_genome_v1.gff3
26680 KB - Modified: 09/14/2023
Tetrahymena_borealis_coding_sequences_v1.fasta
44800 KB - Modified: 09/14/2023

Legacy


1-upd-Genome-assembly.fasta
102607 KB - Modified: 02/11/2021
2-upd-Genome-GFF3-latest-2.gff3
13571 KB - Modified: 02/11/2021
3-upd-cds-fasta-2021.fasta
47827 KB - Modified: 02/11/2021
4-upd-Protein-fasta-2021.fasta
16993 KB - Modified: 02/11/2021
5-upd-Gene-fasta-2021.fasta
63921 KB - Modified: 02/11/2021
T_thermophila_mar2020-CDS fasta.fasta
47819 KB - Modified: 03/01/2020
T_thermophila_mar2020-Gene fasta.fasta
63913 KB - Modified: 03/01/2020
T_thermophila_mar2020-Genome GFF3.gff3
24005 KB - Modified: 03/01/2020
T_thermophila_mar2020-Genome assembly.fasta
102607 KB - Modified: 03/01/2020
T_thermophila_mar2020-Protein fasta.fasta
16985 KB - Modified: 03/01/2020
1-Genome assembly.fasta
102607 KB - Modified: 01/16/2020
2-Genome GFF3.gff3
22833 KB - Modified: 01/16/2020
3-CDS fasta.fasta
47870 KB - Modified: 01/16/2020
4-Protein fasta.fasta
17014 KB - Modified: 01/16/2020
5-Gene fasta.fasta
63964 KB - Modified: 01/16/2020
6-TGD gens BLAST to the predicetd genes.xls
3701 KB - Modified: 01/16/2020
SearchResults.txt
876 KB - Modified: 01/13/2020
2017_06_29_CDH_manual.pdf
245 KB - Modified: 01/03/2018
2017_06_29_MacOS-10.6-CoregulationDataHarvester.zip
13395 KB - Modified: 01/03/2018
2017_06_29_Win-x64-CoregulationDataHarvester.zip
30495 KB - Modified: 01/03/2018
mic.MAC.MIC.gff
13134 KB - Modified: 12/15/2017
mic.cbs.gff
15 KB - Modified: 12/15/2017
mic.ies.gff
604 KB - Modified: 12/15/2017
mic.genome.fasta
151452 KB - Modified: 09/16/2017
2016_README.md
1 KB - Modified: 10/24/2016
2016_mic.agp
79 KB - Modified: 10/24/2016
2016_mic.genome.fasta
151452 KB - Modified: 10/24/2016
2016_mic.supercont.fasta
156642 KB - Modified: 10/24/2016
T_thermophila_MIC.gff3
2795 KB - Modified: 07/12/2016
T_thermophila_MIC_assembly.fasta
154760 KB - Modified: 07/12/2016
T_thermophila_June2014.gff3
28274 KB - Modified: 07/30/2014
T_thermophila_June2014_CDS.fasta
51711 KB - Modified: 07/30/2014
T_thermophila_June2014_assembly.fasta
102291 KB - Modified: 07/30/2014
T_thermophila_June2014_gene.fasta
65191 KB - Modified: 07/30/2014
T_thermophila_June2014_proteins.fasta
18030 KB - Modified: 07/30/2014
T_thermophila_oct2008_proteins.fasta
17006 KB - Modified: 06/21/2013
T_borealis_oct2012.gff3
26680 KB - Modified: 06/19/2013
T_borealis_oct2012_CDS.fasta
44800 KB - Modified: 06/19/2013
T_borealis_oct2012_proteins.fasta
15918 KB - Modified: 06/19/2013
T_borealis_oct2012_supercontigs.fasta
92849 KB - Modified: 06/19/2013
T_elliotti_oct2012.gff3
27672 KB - Modified: 06/19/2013
T_elliotti_oct2012_CDS.fasta
43528 KB - Modified: 06/19/2013
T_elliotti_oct2012_proteins.fasta
15517 KB - Modified: 06/19/2013
T_elliotti_oct2012_supercontigs.fasta
90200 KB - Modified: 06/19/2013
T_malaccensis_oct2012.gff3
31207 KB - Modified: 06/19/2013
T_malaccensis_oct2012_CDS.fasta
48373 KB - Modified: 06/19/2013
T_malaccensis_oct2012_proteins.fasta
17311 KB - Modified: 06/19/2013
T_malaccensis_oct2012_supercontigs.fasta
105931 KB - Modified: 06/19/2013
t_borealis.gff3
26680 KB - Modified: 06/18/2013
t_borealis_CDS.fasta
44800 KB - Modified: 06/18/2013
t_borealis_proteins.fasta
15918 KB - Modified: 06/18/2013
t_borealis_supercontigs.fasta
92849 KB - Modified: 06/18/2013
Bioinformatics_naming_Tet_genes_11-9-12.pdf
117 KB - Modified: 12/04/2012
T_thermophila_dec2011.gff3
26369 KB - Modified: 01/26/2012
T_thermophila_oct2008_assembly.fasta
102279 KB - Modified: 01/26/2012
T_thermophila_domain_info.txt
4493 KB - Modified: 03/30/2011
T_thermophila_final_gene_attributes.txt
4517 KB - Modified: 03/30/2011
T_thermophila_oct2008_CDS.fasta
48822 KB - Modified: 03/30/2011
T_thermophila_oct2008_gene.fasta
63980 KB - Modified: 03/30/2011
oct2008_release.gff
22893 KB - Modified: 03/30/2011
oct2008_release_chr.gff
23729 KB - Modified: 03/29/2011
tta1_oct2008_finalrelease.assembly.fsa.old
102271 KB - Modified: 03/29/2011