TGD Genome Files


Latest Tetrahymena thermophila (Sheng, 2020)


Tetrahymena_thermophila_mac_assembly_v6.fasta
 102607 KB - Modified: 10/21/2024
Tetrahymena_thermophila_gene_v6.fasta
 64786 KB - Modified: 10/21/2024
Tetrahymena_thermophila_CDS_v6.fasta
 53860 KB - Modified: 10/21/2024
Tetrahymena_thermophila_protein_V6.fasta
 18768 KB - Modified: 10/21/2024
Tetrahymena_thermophila_mac_genome_v6_maintranscript.gff3
 18123 KB - Modified: 10/21/2024
Tetrahymena_thermophila_mic_assembly_v5.fasta
 151452 KB - Modified: 09/14/2023
Tetrahymena_thermophila_mic_genome_v5.gff3
 16585 KB - Modified: 09/14/2023

Other Tetrahymena Species (Hamilton, 2016)


Tetrahymena_malaccensis_mac_assembly_v1.fasta
 105931 KB - Modified: 09/14/2023
Tetrahymena_malaccensis_protein_sequences_v1.fasta
 17311 KB - Modified: 09/14/2023
Tetrahymena_malaccensis_mac_genome_v1.gff3
 31207 KB - Modified: 09/14/2023
Tetrahymena_malaccensis_coding_sequences_v1.fasta
 48373 KB - Modified: 09/14/2023
Tetrahymena_elliotti_mac_assembly_v1.fasta
 90200 KB - Modified: 09/14/2023
Tetrahymena_elliotti_protein_sequences_v1.fasta
 15517 KB - Modified: 09/14/2023
Tetrahymena_elliotti_mac_genome_v1.gff3
 27672 KB - Modified: 09/14/2023
Tetrahymena_elliotti_coding_sequences_v1.fasta
 43528 KB - Modified: 09/14/2023
Tetrahymena_borealis_mac_assembly_v1.fasta
 92849 KB - Modified: 09/14/2023
Tetrahymena_borealis_protein_sequences_v1.fasta
 15918 KB - Modified: 09/14/2023
Tetrahymena_borealis_mac_genome_v1.gff3
 26680 KB - Modified: 09/14/2023
Tetrahymena_borealis_coding_sequences_v1.fasta
 44800 KB - Modified: 09/14/2023

Legacy


Tetrahymena_thermophila_mac_genome_v5.gff3
 13500 KB - Modified: 10/21/2024
Tetrahymena_thermophila_protein_sequences_v5.fasta
 16993 KB - Modified: 10/21/2024
Tetrahymena_thermophila_mac_assembly_v5.fasta
 102607 KB - Modified: 10/21/2024
Tetrahymena_thermophila_mac_assembly_v5.fasta.fai
 5 KB - Modified: 10/21/2024
1-upd-Genome-assembly.fasta
 102607 KB - Modified: 02/11/2021
2-upd-Genome-GFF3-latest-2.gff3
 13571 KB - Modified: 02/11/2021
3-upd-cds-fasta-2021.fasta
 47827 KB - Modified: 02/11/2021
4-upd-Protein-fasta-2021.fasta
 16993 KB - Modified: 02/11/2021
5-upd-Gene-fasta-2021.fasta
 63921 KB - Modified: 02/11/2021
T_thermophila_mar2020-CDS fasta.fasta
 47819 KB - Modified: 03/01/2020
T_thermophila_mar2020-Gene fasta.fasta
 63913 KB - Modified: 03/01/2020
T_thermophila_mar2020-Genome GFF3.gff3
 24005 KB - Modified: 03/01/2020
T_thermophila_mar2020-Genome assembly.fasta
 102607 KB - Modified: 03/01/2020
T_thermophila_mar2020-Protein fasta.fasta
 16985 KB - Modified: 03/01/2020
1-Genome assembly.fasta
 102607 KB - Modified: 01/16/2020
2-Genome GFF3.gff3
 22833 KB - Modified: 01/16/2020
3-CDS fasta.fasta
 47870 KB - Modified: 01/16/2020
4-Protein fasta.fasta
 17014 KB - Modified: 01/16/2020
5-Gene fasta.fasta
 63964 KB - Modified: 01/16/2020
6-TGD gens BLAST to the predicetd genes.xls
 3701 KB - Modified: 01/16/2020
7-TGD proteins BLAST to the predicetd proteins.xls
 3971 KB - Modified: 01/16/2020
SearchResults.txt
 876 KB - Modified: 01/13/2020
2017_06_29_CDH_manual.pdf
 245 KB - Modified: 01/03/2018
2017_06_29_MacOS-10.6-CoregulationDataHarvester.zip
 13395 KB - Modified: 01/03/2018
2017_06_29_Win-x64-CoregulationDataHarvester.zip
 30495 KB - Modified: 01/03/2018
mic.MAC.MIC.gff
 13134 KB - Modified: 12/15/2017
mic.cbs.gff
 15 KB - Modified: 12/15/2017
mic.ies.gff
 604 KB - Modified: 12/15/2017
mic.genome.fasta
 151452 KB - Modified: 09/16/2017
2016_README.md
 1 KB - Modified: 10/24/2016
2016_mic.agp
 79 KB - Modified: 10/24/2016
2016_mic.genome.fasta
 151452 KB - Modified: 10/24/2016
2016_mic.supercont.fasta
 156642 KB - Modified: 10/24/2016
T_thermophila_MIC.gff3
 2795 KB - Modified: 07/12/2016
T_thermophila_MIC_assembly.fasta
 154760 KB - Modified: 07/12/2016
T_thermophila_June2014.gff3
 28274 KB - Modified: 07/30/2014
T_thermophila_June2014_CDS.fasta
 51711 KB - Modified: 07/30/2014
T_thermophila_June2014_assembly.fasta
 102291 KB - Modified: 07/30/2014
T_thermophila_June2014_gene.fasta
 65191 KB - Modified: 07/30/2014
T_thermophila_June2014_proteins.fasta
 18030 KB - Modified: 07/30/2014
T_thermophila_oct2008_proteins.fasta
 17006 KB - Modified: 06/21/2013
T_borealis_oct2012.gff3
 26680 KB - Modified: 06/19/2013
T_borealis_oct2012_CDS.fasta
 44800 KB - Modified: 06/19/2013
T_borealis_oct2012_proteins.fasta
 15918 KB - Modified: 06/19/2013
T_borealis_oct2012_supercontigs.fasta
 92849 KB - Modified: 06/19/2013
T_elliotti_oct2012.gff3
 27672 KB - Modified: 06/19/2013
T_elliotti_oct2012_CDS.fasta
 43528 KB - Modified: 06/19/2013
T_elliotti_oct2012_proteins.fasta
 15517 KB - Modified: 06/19/2013
T_elliotti_oct2012_supercontigs.fasta
 90200 KB - Modified: 06/19/2013
T_malaccensis_oct2012.gff3
 31207 KB - Modified: 06/19/2013
T_malaccensis_oct2012_CDS.fasta
 48373 KB - Modified: 06/19/2013
T_malaccensis_oct2012_proteins.fasta
 17311 KB - Modified: 06/19/2013
T_malaccensis_oct2012_supercontigs.fasta
 105931 KB - Modified: 06/19/2013
t_borealis.gff3
 26680 KB - Modified: 06/18/2013
t_borealis_CDS.fasta
 44800 KB - Modified: 06/18/2013
t_borealis_proteins.fasta
 15918 KB - Modified: 06/18/2013
t_borealis_supercontigs.fasta
 92849 KB - Modified: 06/18/2013
Bioinformatics_naming_Tet_genes_11-9-12.pdf
 117 KB - Modified: 12/04/2012
T_thermophila_dec2011.gff3
 26369 KB - Modified: 01/26/2012
T_thermophila_oct2008_assembly.fasta
 102279 KB - Modified: 01/26/2012
T_thermophila_domain_info.txt
 4493 KB - Modified: 03/30/2011
T_thermophila_final_gene_attributes.txt
 4517 KB - Modified: 03/30/2011
T_thermophila_oct2008_CDS.fasta
 48822 KB - Modified: 03/30/2011
T_thermophila_oct2008_gene.fasta
 63980 KB - Modified: 03/30/2011
oct2008_release.gff
 22893 KB - Modified: 03/30/2011
oct2008_release_chr.gff
 23729 KB - Modified: 03/29/2011
tta1_oct2008_finalrelease.assembly.fsa.old
 102271 KB - Modified: 03/29/2011