Identifiers and Description

Gene Model Identifier

TTHERM_00013120

Standard Name

PAT1 (Pot1 associated in Tetrahymena 1)

Aliases

PreTt11818 | 1.m00866

Description

PAT1 hypothetical protein; Pot1a-associated telomere protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF08561 ) Mitochondrial ribosomal protein L37

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_02737.1 2.000319284850678e-127
Description: hypothetical protein (371 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:25303953: Cranert S, Heyse S, Linger BR, Lescasse R, Price C (2014) Tetrahymena Pot2 is a developmentally regulated paralog of Pot1 that localizes to chromosome breakage sites but not to telomeres. Eukaryotic cell 13(12):1519-29
  2. Ref:24297442: Premkumar VL, Cranert S, Linger BR, Morin GB, Minium S, Price C (2014) The 3' overhangs at Tetrahymena thermophila telomeres are packaged by four proteins, Pot1a, Tpt1, Pat1, and Pat2. Eukaryotic cell 13(2):240-5
  3. Ref:21900503: Linger BR, Morin GB, Price CM (2011) The Pot1a-associated proteins Tpt1 and Pat1 coordinate telomere protection and length regulation in Tetrahymena. Molecular biology of the cell 22(21):4161-70

Sequences 

>TTHERM_00013120(coding)
ATGAATTAGAAAAAACAAAAAGAAACAGAAAGCAATATTGATATTTTTAGATTGCTTTCA
GATGGAATAAAGAGTTATGAGCAAAAAGGTTTGAATCTTAAATTAAAAGAAAAATCATCT
AATACTAAACTGCCATATTGCTTATACGAAGATTTAAAGATTATATTTGAGTTTAGTTAA
AATTCGGAATCGAAATTAACTGTCTTTAAGTAGCTTGCAAGTAATTAGTTATCTCATAGA
TCAGAAGATTCAATAAGGAGTCGTTATAGAGATTTCATTTAAGAATTAAATCCTTCTGAT
TTTTAAAATATTTCAAAATATGTTATTGAGAAAAGATCCATTGAAGGATATCTTGTAAAA
GAGAGAGATGAGCATGGAAACAAAACATATGTTGTAAAGGATCAGTTAAAAACAACAAGT
AGCGAAAGTAAATCTTAAAAGAATCCTTCAAAAAAGACTGTTGAACAATAATAAAGTAAA
AGTAAAGAAGAAATAAAATTGCCTTTGAAGAGAAAGCCTGAAAACGTACCTGAAATTCTT
ATAAATGGAAAAAAATAACTCAAATCTACCAAACCAGATAATCATTAAAAGGAGCCTGCA
CAAAAGATTAAACAATAAGATCAAAATAACTTAGAAGAGGAAGAAGAAAAAGAGTTTCAA
TACAAAAAGACTTAAAAAAATAAAAGCTAGATAAATTAAGTAAATGAAGTTGATTCAAGA
AATAAAAAGAATTAAAATAACTAAATGGAAGTTCAATAACCATAGCCCAAGTAAAATCAA
TAGCAATAACAACAAGCTTAAGCTCATAAAATATCTAATTAACTGAGTGAGTAGGAATAT
AAAGATGCAAGGGAGTTAGATGTCTATATTCACTTCCTAGCTAATTATGAAAATGTACAA
AAAAAGAGTTTGATCCACACTCTAGACAAGCTATCTGGAGATTTCAATTAACTTGTTGAC
TATTTATAAACTCAAAACCATAATTTACTCTGGAAAGAAGACGAAGACGAAGTCTTACGC
AATTTTAGTGAGCAATCATCTCAAACTATCTACCTACTTAAAACCTTAAAAAAAGGAAAA
GAAAATATCTTAAGAAGAGCTACTTATCTAGGCATAGAACTCCCAGATTTTGAATGA


>TTHERM_00013120(gene)
ATGAATTAGAAAAAACAAAAAGAAACAGAAAGCAATATTGATATTTTTAGATTGCTTTCA
GATGGAATAAAGAGTTATGAGCAAAAAGGTTTGAATCTTAAATTAAAAGAAAAATCATCT
AATACTAAACTGCCATATTGCTTATACGAAGATTTAAAGATTATATTTGAGTTTAGTTAA
AATTCGGAATCGAAATTAACTGTCTTTAAGTAGCTTGCAAGTAATTAGTTATCTCATAGA
TCAGAAGATTCAATAAGGAGTCGTTATAGAGATTTCATTTAAGAATTAAATCCTTCTGAT
TTTTAAAATATTTCAAAATATGTTATTGAGAAAAGATCCATTGAAGGATATCTTGTAAAA
GAGAGAGATGAGCATGGAAACAAAACATATGTTGTAAAGGATCAGTTAAAAACAACAAGT
AGCGAAAGTAAATCTTAAAAGAATCCTTCAAAAAAGACTGTTGAACAATAATAAAGTAAA
AGTAAAGAAGAAATAAAATTGCCTTTGAAGAGAAAGCCTGAAAACGTACCTGAAATTCTT
ATAAATGGAAAAAAATAACTCAAATCTACCAAACCAGATAATCATTAAAAGGAGCCTGCA
CAAAAGATTAAACAATAAGATCAAAATAACTTAGAAGAGGAAGAAGAAAAAGAGTTTCAA
TACAAAAAGACTTAAAAAAATAAAAGCTAGATAAATTAAGTAAATGAAGTTGATTCAAGA
AATAAAAAGAATTAAAATAACTAAATGGAAGTTCAATAACCATAGCCCAAGTAAAATCAA
TAGCAATAACAACAAGCTTAAGCTCATAAAATATCTAATTAACTGAGTGAGTAGGAATAT
AAAGATGCAAGGGAGTTAGATGTCTATATTCACTTCCTAGCTAATTATGAAAATGTACAA
AAAAAGAGTTTGATCCACACTCTAGACAAGCTATCTGGAGATTTCAATTAACTTGTTGAC
TATTTATAAACTCAAAACCATAATTTACTCTGGAAAGAAGACGAAGACGAAGTCTTACGC
AATTTTAGTGAGCAATCATCTCAAACTATCTACCTACTTAAAACCTTAAAAAAAGGAAAA
GAAAATATCTTAAGAAGAGCTACTTATCTAGGCATAGAACTCCCAGATTTTGAATGA


>TTHERM_00013120(protein)
MNQKKQKETESNIDIFRLLSDGIKSYEQKGLNLKLKEKSSNTKLPYCLYEDLKIIFEFSQ
NSESKLTVFKQLASNQLSHRSEDSIRSRYRDFIQELNPSDFQNISKYVIEKRSIEGYLVK
ERDEHGNKTYVVKDQLKTTSSESKSQKNPSKKTVEQQQSKSKEEIKLPLKRKPENVPEIL
INGKKQLKSTKPDNHQKEPAQKIKQQDQNNLEEEEEKEFQYKKTQKNKSQINQVNEVDSR
NKKNQNNQMEVQQPQPKQNQQQQQQAQAHKISNQLSEQEYKDARELDVYIHFLANYENVQ
KKSLIHTLDKLSGDFNQLVDYLQTQNHNLLWKEDEDEVLRNFSEQSSQTIYLLKTLKKGK
ENILRRATYLGIELPDFE