Identifiers and Description

Gene Model Identifier

TTHERM_00016200

Standard Name

HHT4 (Histone H Three)

Aliases

PreTt11927 | 1.m00975

Description

HHT4 histone H3.4; histone H3.3- putative

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00125 ) Core histone H2A/H2B/H3/H4

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

  • ( SD01377 ) Micronucleus: HHT4 is replaced by neo2
  • ( SD01378 ) Micronucleus: HHT4 is replaced by neo2
  • ( SD01858 )
  • ( SD02640 ) Micronucleus: HHT4 is replaced by neo2
  • ( SD02641 ) Micronucleus: HHT4 is replaced by neo2
  • ( SD02744 ) Micronucleus: neo2 into HHT4 Macronucleus: neo2 into HHT4

Homologs

Source Identifier Score
Tetrahymena borealis EI9_02628.1 9.998285701479858e-93
Description: histone H3 (137 aa)
WormBase WBGene00001887 4.001371804839974e-78
Description: locus:his-13 Histone H3 status:Predicted UniProt:P08898 protein_id:CAB05834.1
Tetrahymena borealis EI9_20374.1 4.001371804839974e-78
Description: hypothetical protein (160 aa)
Oxytricha Contig1081.1.g60 1.9998099689916736e-77
Description: Core histone H2A/H2B/H3/H4
DictyBase DDB_G0267402 2.9990539278805726e-74
Description: H3a on chromosome: 1 position 1520754 to 1521173
SGD YNL031C 5.001369568193564e-73
Description: HHT2 Histone H3, core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT1); regulated by acetylation, methylation, and phosphorylation
Stentor Coeruleus SteCoe_17948 7.281290178321643e-33
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:37024975: Nabeel-Shah S, Garg J, Ashraf K, Jeyapala R, Lee H, Petrova A, Burns JD, Pu S, Zhang Z, Greenblatt JF, Pearlman RE, Lambert JP, Fillingham J (2023) Multilevel interrogation of H3.3 reveals a primordial role in transcription regulation. Epigenetics & chromatin 16:10
  2. Ref:16908532: Cui B, Liu Y, Gorovsky MA (2006) Deposition and function of histone H3 variants in Tetrahymena thermophila. Molecular and cellular biology 26(20):7719-30

Sequences 

>TTHERM_00016200(coding)
ATGGCTAGAACTAAATAAACTGCTAGAAAGTCAACTAGTATTAAGGCTCCTAGAAAACAA
TTGGCTGCCAAGGCTGCCAGAAAGTCTGCCCCCATCTCTGGTGGTATCAAAAAGCCCCAT
AAATTCAGACCTGGTACCGTTGCCTTGAGAGAAATCAGAAAGTATTAAAAGACTACTGAC
TTACTTATTAGAAAGCTCCCCTTCTAAAGACTTGTCAGAGATATTGCTATGGAAATGAAG
AGCGATATCAGATTCCAATCACAAGCTATCCTTGCCCTCCAAGAAGCTGCTGAAGCCTAC
CTAGTAGGTTTATTCGAAGATACCAACCTCTGCGCTATCCACGCTAGAAGAGTTACTATT
ATGACCAAGGATCTCCACCTTGCTAGAAGAATTAGAGGAGAAAGATTCTGA


>TTHERM_00016200(gene)
ATGGCTAGAACTAAATAAACTGCTAGAAAGTCAACTAGTATTAAGGCTCCTAGAAAACAA
TTGGCTGCCAAGGCTGCCAGAAAGTCTGCCCCCATCTCTGGTGGTATCAAAAAGCCCCAT
AAATTCAGACCTGGTACCGTTGCCTTGAGAGAAATCAGAAAGTATTAAAAGACTACTGAC
TTACTTATTAGAAAGCTCCCCTTCTAAAGACTTGTCAGAGATATTGCTATGGAAATGAAG
AGCGATATCAGATTCCAATCACAAGCTATCCTTGCCCTCCAAGAAGCTGCTGAAGCCTAC
CTAGTAGGTTTATTCGAAGATACCAACCTCTGCGCTATCCACGCTAGAAGAGTTACTATT
ATGACCAAGGATCTCCACCTTGCTAGAAGAATTAGAGGAGAAAGATTCTGA


>TTHERM_00016200(protein)
MARTKQTARKSTSIKAPRKQLAAKAARKSAPISGGIKKPHKFRPGTVALREIRKYQKTTD
LLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTI
MTKDLHLARRIRGERF