Identifiers and Description

Gene Model Identifier

TTHERM_00023920

Standard Name

RRM65 (RNA recognition motif-containing protein 65)

Aliases

PreTt12005 | 1.m01053

Description

RRM65 RNA recognition motif protein

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF01480 ) PWI domain
  • ( PF02755 ) RPEL repeat
  • ( PF04394 ) Protein of unknown function, DUF536
  • ( PF08729 ) Histone promoter control 2 (HPC2)

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_13860.1 9.997093137033517e-262
Description: hypothetical protein (722 aa)
Oxytricha Contig11888.0.g7 2.000620012690291e-23
Description: PWI domain
WormBase WBGene00012245 0.00000000000004998767099442072
Description: status:Partially_confirmed UniProt:H2L2D0 protein_id:CCE72034.1
DictyBase DDB_G0269926 0.00000000000009996062864481225
Description: DDB_G0269926 on chromosome: 1 position 3880004 to 3882178
Stentor Coeruleus SteCoe_819 0.0000000000002543665647376923
Description: None
SGD YER165W 0.000000100009565553302
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00023920(coding)
ATGAGCGACATGAATAATATGATGCGTATGCCTGGATAGCCTCCAAATGGCATGCCTATG
CAACCACCTATGAATTTAAACCCACAAATGATTCCAGGACAAATGGTGCCTCCTCCATTT
ATGGGACCAGGAAATTAGCACCAATAGCCTCCTATGTTTCCTCCACAACAAATTCCAGGA
ATGCCACCATTTCCTCATCACATGGGTCATCCTCCCCCTCATGGAATGATGAACTAATTT
TAGTAGTTCCCCCCAATGAACTAAATGCCTAACATGCCTCCTTTTCAACCACCAAATTTT
TAAGTGCCACCTCCTATGATGGGCCAACAACCTCAAATTTAAGTAGCTCCCTCAATTCAT
GCACCTCCTCTTTTAAATAATGCACCTTAAAACCCTAATATGATTAGAGAAACTATTACT
GGCGGGCCCTCTGCAATCCCTTCATCTTCTGCTCCCCCCTCTAACACCTCCTCTTCAGAC
TCCCAATGGCTTAAATTATTCGTTAATAACATTCATCCAGACGTGCCTGACGAGTTCATC
AAAAAGTTATTAGAAGAATGTGGTCAAGTAGAAAAGTGGAAAAGGTAGAGTGATGAAAAA
GGTAATTTAAATAAATTTGGTATTGTAGAATATAAAATGTTCGAAAGTGTTCTTAAGTGC
ATACGTATTCTTGATGGCTTTGAAATTATGGACGAAAAACTTGTTGTTAAGTCCTCATAA
ACAACTTAAACTTTCATAGAGTAATGGAAATAGCTCAAAAGCAAAAAATGGGAGGAAGAA
TAAAAGTAGAAAGCATCTACTGAGTTTGAATCTTTTGACTAGTTCCTTGAAAAGGATGAC
TCTGTCATTAGAGAAAGAATCGAATTGCACATGAAGAGCATAGATGAAAAAGTTGAGAAA
GTAAGAGAAAAAAAGAGAGAAGACGAAGAAAAAAAACTTCATCCTCGTGAAAAGGATAGA
GATAATAAAAAGAAGTAGTAATAAAGAGAAATTGAAAAGAAAGGTAAAGAAAAATTAAAA
GAATGGTTGCAGGTAGAAGAAGACATGGCCCGTGAAAAAAGAAAAGAAAGGGAAAGAGAA
AAAGAGCGTGATAGAATTCGTCAAAAGGCTCTAGAAAGGGAATTAACTTATACTGATGAC
ATTGACCGTCACAAACAAAGGGGCAGAATGATGGAGCGCAAGAGATAACGCCAAAGAGAA
TTGGAGGAAGATGAAAATGATAGAAAAAAAGAATTAGAACTACTTAATCCTCCTGAGCCT
GAATTTAACATTCCTATGCCTGAAGAGCCATTAGATGATTATGAACCATCAAGCAGTAAT
GGAATAAATGGATAACATAATCACACCGATAAAATTGATAGAGGAGTGATTAACTTAAAC
TTTGAAGAAATCGATTTAAGTCAAAGTAAAAAGCCAAATGAAGAAGTCATTGAATATACT
ATAGAAAATCCTAGAAATAACATAATTAACCAAACAATCAATAAGCTAAATATTTAATTC
AAGTAAGATTTTAGTGATAAAATTTAAAAAGGCGAATATGTTATGCCTGCAATGGAAGAA
GAATATTAAGAGCCTGTTGCAAATATTAATGAATACCACTCATCTCGTGCAATGTAAATA
GAATCTGATAATAAAGATCCCTCTATCAAGTAAATCTTTGGAAACTTAGACGAAGAAGAA
GAGGAAGAAAGACAAAGAAACCTCAGAAAAACTGAGCTTCCTAAAATTGGACATGCTCGT
TTCGTCGAGTAAAGAGAAATTATTCGTAAACAGTAAAATGAGTCTGGAGAAGAAAAAACT
CCTGCTCCAAGACAATTATCTGAAGAAGAAATGAAAAAAGAACTTAAAGAAATCCTCTAG
CGTGTACCACCTATTAGCGGCAACAACTCAGCTTTGTTCTCATTCAATTTTAATTGGGAA
TTATTTGAAAAGAGTGGACTACTTGATAAGAAAATAAAACCTTTCCTTTTAAAGAAGAGT
TAAGAACTTTTGGGTTAGGAAGAATAAGGATTCGTTGATCTTATAGTTAAGAAGTTTACT
CAAAGACCAACCCCAGAAAAATTGGTTAGATAGATTGTGAAAATTTTGGATGAAGACGAA
TCTGAGAAGTTTATAGCATCACTTTGGAGAATTATGATCTTTGAGACACTAAAATATGAA
AAATTCTTGCACATTGTCTGA


>TTHERM_00023920(gene)
ATGAGCGACATGAATAATATGATGCGTATGCCTGGATAGCCTCCAAATGGCATGCCTATG
CAACCACCTATGAATTTAAACCCACAAATGATTCCAGGTTTAAAATAAATTAATTGATTT
TAAATTACAATTATTGATCATATTCTAATAAAATTAGGACAAATGGTGCCTCCTCCATTT
ATGGGACCAGGAAATTAGCGTAATAATTTAAGAATAGAATATTAAAATTTCAAATTAAAT
CATTTCAATTACAATTTCGAATTCTAAAATGCTAAAAATAATTTAATTTTCTTTATAATA
ATATTTAAAAAAGCAATGAGACAAATGCCAATGAACAGTAATATAAGCTATTTTCTCGCA
ATAGTATCAAATTTTAATAATCTTTTTCATTATTTAGACCAATAGCCTCCTATGTTTCCT
CCACAACAAATTCCAGGAATGCCACCATTTCCTCATCACAGTAATTAATAATTAAATAAA
TAAATAGATAAAATTTACTTCATTGATTATTTGTAGGTTCTTTAAATCTATTTGATATCT
TTAATAGCTAGCAAAATAACAAGGAGCCAAGTATTTATAATAATAATCAATAAATACAAA
TATGAAATTTAAGATAAATTTACTCATAAAATCTCAACAAATAAATAATTGAAAATAAAA
AAATGTTAGAAAAAGAATAAATTATATTTAAAATTGTTAACAAATAATTGCATATTAATA
TATAAATTGTATAAAAAGTGGGTCATCCTCCCCCTCATGGAATGATGAACTAATTTTAGT
AGTTCCCCCCAATGAACTAAATGCCTAACATGCCTCCTTTTCAACCACCAAATTTTTAAG
TGCCACCTCCTATGATGGGCCAACAACCTCAAATTTAAGTAGCTCCCTCAATTCATGCAC
CTCCTCTTTTAAATAATGCACCTTAAAACCCTAATATGATTAGAGAAACTATTACTGGCG
GGCCCTCTGCAATCCCTTCATCTTCTGCTCCCCCCTCTAACACCTCCTCTTCAGACTCCC
AATGGCTTAAATTATTCGTTAATAACATTCATCCAGACGTGCCTGACGAGTTCATCAAAA
AGTTATTAGAAGTAAAAAAGATTAACTTAAACAAATTTATATTAATTAAAAATAGGATTG
AAAATCTAAGTTTAGTTTTTTTTGAATTGATTGTGTAAAGATTTAAAATCACTAGTTTGC
AAACTATTAAAAACAAGCAAACAAAAAATAAACATTCACAGTTAAAACATACTTTAAAGC
ACTGCTGCTTGAATCGAGAGCAGATACAGTAAATATAAATAAGTAGATATCAATTCATAA
GTGCTAACATTTTATTTTATTTTCTAAATAATCAATTAGCCTTTAGCGATTACGATTATT
CTCAATCGCTTTTTTGGACATATATTTATTTGTTATAAACACCAACCATTCAAGCAAGCA
AATAATCAATCAATCATGTTAGTTAGTTCGTATTAAAATGATTAGTAGTAAAATTTTTAT
TTCTATTTGAATGATAATTAATATCAAGTATACTTTTGAAATTAAGAAAGATTCAATGAA
ATTTGATTTGAAACAATGAATGAATTATATTATTTGAACTGTGGTGGTAAATGTTAATTA
AACTCTCAGCAAAATATAAAAGATTTAATCTAATTTTTTTCCTAGAAATTATTTATATTG
ATTTTTTAAAAACAAACGCTAAGCTTCATTCATATCTTTTTTTAAAAAACAGGAATGTGG
TCAAGTAGAAAAGTGGAAAAGGTAGAGTGATGAAAAAGGTAATTTAAATAAATTTGGTAT
TGTAGAATATAAAATGTTCGAAAGTGTTCTTAAGTGCATACGTATTCTTGATGGCTTTGA
AATTATGGACGAAAAACTTGTTGTTAAGTCCTCATAAACAACTTAAACTTTCATAGAGTA
ATGGAAATAGCTCAAAAGCAAAAAATGGGAGGAAGAATAAAAGTAGAAAGCATCTACTGA
GTTTGAATCTTTTGACTAGTTCCTTGAAAAGGATGACTCTGTCATTAGAGAAAGAATCGA
ATTGCACATGAAGAGCATAGATGTAATTTATTTATTTTTTTACTCTTTATTCAACAAATT
TCTTCTTTTTTTGTTTTCTTGAATAATTTTTTAACGGTTTTAAATAGGAAAAAGTTGAGA
AAGTAAGAGAAAAAAAGAGAGAAGACGAAGAAAAAAAACTTCATCCTCGTGAAAAGGATA
GAGATAATAAAAAGAAGTAGTAATAAAGAGAAATTGAAAAGAAAGGTAAAGAAAAATTAA
AAGAATGGTTGCAGGTAGAAGAAGACATGGCCCGTGAAAAAAGAAAAGAAAGGGAAAGAG
AAAAAGAGCGTGATAGAATTCGTCAAAAGGCTCTAGAAAGGGAATTAACTTATACTGATG
ACATTGACCGTCACAAACAAAGGGGCAGAATGATGGAGCGCAAGAGATAACGCCAAAGAG
AATTGGAGGAAGATGAAAATGATAGAAAAAAAGAATTAGAACTACTTAATCCTCCTGAGC
CTGAATTTAACATTCCTATGCCTGAAGAGCCATTAGATGATTATGAACCATCAAGCAGTA
ATGGAATAAATGGATAACATAATCACACCGATAAAATTGATAGAGGAGTGATTAACTTAA
ACTTTGAAGAAATCGATTTAAGTCAAAGTAAAAAGCCAAATGAAGAAGTCATTGAATATA
CTATAGAAAATCCTAGAAATAACATAATTAACCAAACAATCAATAAGCTAAATATTTAAT
TCAAGTAAGATTTTAGTGATAAAATTTAAAAAGGCGAATATGTTATGCCTGCAATGGAAG
AAGAATATTAAGAGCCTGTTGCAAATATTAATGAATACCACTCATCTCGTGCAATGTAAA
TAGAATCTGATAATAAAGATCCCTCTATCAAGTAAATCTTTGGAAACTTAGACGAAGAAG
AAGAGGAAGAAAGACAAAGAAACCTCAGAAAAACTGAGCTTCCTAAAATTGGACATGCTC
GTTTCGTCGAGTAAAGAGAAATTATTCGTAAACAGTAAAATGAGTCTGGAGAAGAAAAAA
CTCCTGCTCCAAGACAATTATCTGAAGAAGAAATGAAAAAAGAACTTAAAGAAATCCTCT
AGCGTGTACCACCTATTAGCGGCAACAACTCAGCTTTGTTCTCATTCAATTTTAATTGGG
AATTATTTGAAAAGGTAATTTTTATTTTAAAATAGCTTTAACATTCAAATGTTATATTAA
AATAAATATGGCAAAATACAATAAAACTCTAATGAATAAAATATATTTGATTAAAAGTGA
AATATTTCACCATCATTTTTGAATAAATTATTAAATTCATAATAAAGTATAAAAAAAGAC
ATTAATAAACGAATTAAATTCATTAAAAAAATTGTATAAAAATTATATAAAATTAAATTA
ATAAAAAAATAATTTAAAATTAGAGTGGACTACTTGATAAGAAAATAAAACCTTTCCTTT
TAAAGAAGAGTTAAGAACTTTTGGGTTAGGAAGAATAAGGATTCGTTGATCTTATAGTTA
AGAAGTTTACTCAAAGACCAACCCCAGAAAAATTGGTTAGATAGATTGTGAAAATTTTGG
ATGAAGACGAATCTGAGAAGTTTATAGCATCACTTTGGAGAATTATGATCTTTGAGACAC
TAAAATATGAAAAATTCTTGCACATTGTCTGA


>TTHERM_00023920(protein)
MSDMNNMMRMPGQPPNGMPMQPPMNLNPQMIPGQMVPPPFMGPGNQHQQPPMFPPQQIPG
MPPFPHHMGHPPPHGMMNQFQQFPPMNQMPNMPPFQPPNFQVPPPMMGQQPQIQVAPSIH
APPLLNNAPQNPNMIRETITGGPSAIPSSSAPPSNTSSSDSQWLKLFVNNIHPDVPDEFI
KKLLEECGQVEKWKRQSDEKGNLNKFGIVEYKMFESVLKCIRILDGFEIMDEKLVVKSSQ
TTQTFIEQWKQLKSKKWEEEQKQKASTEFESFDQFLEKDDSVIRERIELHMKSIDEKVEK
VREKKREDEEKKLHPREKDRDNKKKQQQREIEKKGKEKLKEWLQVEEDMAREKRKERERE
KERDRIRQKALERELTYTDDIDRHKQRGRMMERKRQRQRELEEDENDRKKELELLNPPEP
EFNIPMPEEPLDDYEPSSSNGINGQHNHTDKIDRGVINLNFEEIDLSQSKKPNEEVIEYT
IENPRNNIINQTINKLNIQFKQDFSDKIQKGEYVMPAMEEEYQEPVANINEYHSSRAMQI
ESDNKDPSIKQIFGNLDEEEEEERQRNLRKTELPKIGHARFVEQREIIRKQQNESGEEKT
PAPRQLSEEEMKKELKEILQRVPPISGNNSALFSFNFNWELFEKSGLLDKKIKPFLLKKS
QELLGQEEQGFVDLIVKKFTQRPTPEKLVRQIVKILDEDESEKFIASLWRIMIFETLKYE
KFLHIV