Identifiers and Description

Gene Model Identifier

TTHERM_00024230

Standard Name

RAB52 (RAB GTPase 52)

Aliases

PreTt12036 | 1.m01084

Description

RAB52 small GTPase family Rab protein; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events; Small GTPase

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

  • collagen metabolic process (IEA) | GO:0032963
  • embryonic brain development (IEA) | GO:1990403
  • epithelium regeneration (IEA) | GO:1990399
  • extraembryonic membrane development (IEA) | GO:1903867
  • heme A biosynthetic process (IEA) | GO:0006784
  • heme biosynthetic process (IEA) | GO:0006783
  • humoral immune response (IEA) | GO:0006959
  • negative regulation of chemokine-mediated signaling pathway (IEA) | GO:0070100
  • negative regulation of glycine secretion, neurotransmission (IEA) | GO:1904625
  • negative regulation of PERK-mediated unfolded protein response (IEA) | GO:1903898
  • negative regulation of phospholipid translocation (IEA) | GO:0061093
  • negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (IEA) | GO:0062026
  • obsolete dynamin family protein polymerization involved in mitochondrial fission (IEA) | GO:0003374
  • obsolete negative regulation of cGMP catabolic process (IEA) | GO:0030830
  • obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction (IEA) | GO:0052308
  • obsolete regulation of telomeric RNA transcription from RNA pol II promoter (IEA) | GO:1901580
  • ommochrome biosynthetic process (IEA) | GO:0006727
  • palisade mesophyll development (IEA) | GO:1903866
  • phagocytosis (IEA) | GO:0006909
  • phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene (IEA) | GO:0018956
  • phenanthrene catabolic process via trans-9(S),10(S)-dihydrodiolphenanthrene (IEA) | GO:0018957
  • phosphorelay signal transduction system (IEA) | GO:0000160
  • photosynthetic NADP+ reduction (IEA) | GO:0009780
  • plant-type cell wall modification (IEA) | GO:0009827
  • positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902643
  • positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria (IEA) | GO:0006965
  • positive regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation (IEA) | GO:2000704
  • positive regulation of turning behavior involved in mating (IEA) | GO:0061095
  • positive regulation of venous endothelial cell fate commitment (IEA) | GO:2000789
  • pre-replicative complex assembly involved in cell cycle DNA replication (IEA) | GO:1902299
  • propan-2-ol biosynthetic process (IEA) | GO:1902640
  • prostate induction (IEA) | GO:0060514
  • protein localization to old growing cell tip (IEA) | GO:1903858
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902641
  • regulation of antisense RNA transcription (IEA) | GO:0060194
  • regulation of cytokinin dehydrogenase activity (IEA) | GO:1903856
  • regulation of dendrite extension (IEA) | GO:1903859
  • regulation of ubiquitin homeostasis (IEA) | GO:0010993
  • response to osmotic stress (IEA) | GO:0006970
  • tertiary alcohol biosynthetic process (IEA) | GO:1902645

Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences 

>TTHERM_00024230(coding)
ATGTGTTTTTCTAATTAAAAGAAACAAAAGAATAGAAAAATAATTAATTAAACAAATTCT
TTGAAAAGTAAAAAAGAAATGAGTAAGGTAGCAAATAGCAATGATAATAAAATACGCATT
CTTTTTTGTGGAAATATAAATGTTGGTAAGTCATGTATAATTTAAAGGTTAATTACCAAT
AATTTTATAGAAAACTACACTCCTACAGTTGGAGTTGACTTTAGATCAATATATTATTAA
ATTAATTAAACAAAGGTCTAAGTCAATCTATTAGATATTCCTGGATAGGATAGATATAAT
GCATTAACACTGTCTTAAATAAGAAATGTAGATGGAGTTGTCTTTGTCTATGATATTTCT
GACATGGATTCTTTCACAGATATTATAAATTGGTAATAAAAAATTTAAAGTGCAGCTCAT
GAAAATACTTTTTAAACTCTTCTTGGAAATAAATGTGATTTATTAGATAGATAGGTGCCT
TTCAATAAAGGATTAGAATTTGCAGAGTCTAAAAGTATGAATTTCTTTGAGACCTCAGCT
AAAAATGGTAAAGATGTAGTAAATTCAGTTCAGAGTTTAGCTCAAAAAATATTTTGTGAA
AGGTTGATGAATTAAAATTAATAAAAAAATGATGAGAATGGCACAGTTAAGCTTTAAAAA
TCGAAACTAACCTTTCTAAATTTTTTTAAGGGTGCTTATAATTACTATTGTTGA



>TTHERM_00024230(gene)
CATCAAGAAGCTTACCAAACAATTAATAGCTTACTTATTAGAATATAAGAGTTTTAGTTT
AAATATTCTAAAAAGAAGTGAGTTAATGTTGATATGTGTTTTTCTAATTAAAAGAAACAA
AAGAATAGAAAAATAATTAATTAAACAAATTCTTTGAAAAGTAAAAAAGAAATGAGTAAG
GTAGCAAATAGCAATGATAATAAAATACGCATTCTTTTTTGTGGAAATATAAATGTTGGT
AAGTCATGTATAATTTAAAGGTTAATTACCAATAATTTTATAGAAAACTACACTCCTACA
GTTGGAGTTGACTTTAGATCAATATATTATTAAATTAATTAAACAAAGGTCTAAGTCAAT
CTATTAGATATTCCTGGATAGGATAGATATAATGCATTAACACTGTCTTAAATAAGAAAT
GTAGATGGAGTTGTCTTTGTCTATGATATTTCTGACATGGATTCTTTCACAGATATTATA
AATTGGTAATAAAAAATTTAAAGTGCAGCTCATGAAAATACTTTTTAAACTCTTCTTGGA
AATAAATGTGATTTATTAGATAGATAGGTGCCTTTCAATAAAGGATTAGAATTTGCAGAG
TCTAAAAGTATGAATTTCTTTGAGACCTCAGCTAAAAATGGTAAAGATGTAGTAAATTCA
GTTCAGAGTTTAGCTCAAAAAATATTTTGTGAAAGGTTGATGAATTAAAATTAATAAAAA
AATGATGAGAATGGCACAGTTAAGCTTTAAAAATCGAAACTAACCTTTCTAAATTTTTTT
AAGGGTGCTTATAATTACTATTGTTGAAGTTATTAATGGTTTATGTACAGGAAAAATATA
TTCCTTTATACTTTAAGTAAATTGAAAATAATGATTTTCTATATAATAAAAATTATAAAA
ATATATATATATTCAAATGTTCTATATTAATAATAATGCATATAAATGTAACCAAATTAA
AC



>TTHERM_00024230(protein)
MCFSNQKKQKNRKIINQTNSLKSKKEMSKVANSNDNKIRILFCGNINVGKSCIIQRLITN
NFIENYTPTVGVDFRSIYYQINQTKVQVNLLDIPGQDRYNALTLSQIRNVDGVVFVYDIS
DMDSFTDIINWQQKIQSAAHENTFQTLLGNKCDLLDRQVPFNKGLEFAESKSMNFFETSA
KNGKDVVNSVQSLAQKIFCERLMNQNQQKNDENGTVKLQKSKLTFLNFFKGAYNYYC