Identifiers and Description

Gene Model Identifier

TTHERM_00024230

Standard Name

RAB52 (RAB GTPase 52)

Aliases

PreTt12036 | 1.m01084

Description

RAB52 small GTPase family Rab protein; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00009 ) Elongation factor Tu GTP binding
  • ( PF00025 ) ADP-ribosylation factor family
  • ( PF00071 ) Ras family
  • ( PF01926 ) GTPase of unknown function
  • ( PF03029 ) Conserved hypothetical ATP binding protein
  • ( PF08477 ) Miro-like protein
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( TIGR00650 ) GTP-binding conserved hypothetical protein

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
SGD YFL038C 1.0004783691736523e-35
Description: YPT1 Rab family GTPase, involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by protein geranylgeranyltransferase type II (Bet2p-Bet4p)
Oxytricha Contig11247.0.g57 2.0003218023735366e-33
Description: Ras family
Tetrahymena borealis EI9_18305.1 9.99723014177113e-33
Description: Ras family protein (212 aa)
DictyBase DDB_G0284985 3.999374135750469e-31
Description: rab1D on chromosome: 4 position 2756032 to 2757408
WormBase WBGene00004273 2.0008113830639685e-30
Description: locus:rab-10 status:Confirmed UniProt:Q94148 protein_id:CCD70773.1
Stentor Coeruleus SteCoe_24985 0.000000000000001713908431542013
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences 

>TTHERM_00024230(coding)
ATGAGTAAGGTAGCAAATAGCAATGATAATAAAATACGCATTCTTTTTTGTGGAAATATA
AATGTTGGTAAGTCATGTATAATTTAAAGGTTAATTACCAATAATTTTATAGAAAACTAC
ACTCCTACAGTTGGAGTTGACTTTAGATCAATATATTATTAAATTAATTAAACAAAGGTC
TAAGTCAATCTATTAGATATTCCTGGATAGGATAGATATAATGCATTAACACTGTCTTAA
ATAAGAAATGTAGATGGAGTTGTCTTTGTCTATGATATTTCTGACATGGATTCTTTCACA
GATATTATAAATTGGTAATAAAAAATTTAAAGTGCAGCTCATGAAAATACTTTTTAAACT
CTTCTTGGAAATAAATGTGATTTATTAGATAGATAGGTGCCTTTCAATAAAGGATTAGAA
TTTGCAGAGTCTAAAAGTATGAATTTCTTTGAGACCTCAGCTAAAAATGGTAAAGATGTA
GTAAATTCAGTTCAGAGTTTAGCTCAAAAAATATTTTGTGAAAGGTTGATGAATTAAAAT
TAATAAAAAAATGATGAGAATGGCACAGTTAAGCTTTAAAAATCGAAACTAACCTTTCTA
AATTTTTTTAAGGGTGCTTATAATTACTATTGTTGA


>TTHERM_00024230(gene)
ATGAGTAAGGTAGCAAATAGCAATGATAATAAAATACGCATTCTTTTTTGTGGAAATATA
AATGTTGGTAAGTCATGTATAATTTAAAGGTTAATTACCAATAATTTTATAGAAAACTAC
ACTCCTACAGTTGGAGTTGACTTTAGATCAATATATTATTAAATTAATTAAACAAAGGTC
TAAGTCAATCTATTAGATATTCCTGGATAGGATAGATATAATGCATTAACACTGTCTTAA
ATAAGAAATGTAGATGGAGTTGTCTTTGTCTATGATATTTCTGACATGGATTCTTTCACA
GATATTATAAATTGGTAATAAAAAATTTAAAGTGCAGCTCATGAAAATACTTTTTAAACT
CTTCTTGGAAATAAATGTGATTTATTAGATAGATAGGTGCCTTTCAATAAAGGATTAGAA
TTTGCAGAGTCTAAAAGTATGAATTTCTTTGAGACCTCAGCTAAAAATGGTAAAGATGTA
GTAAATTCAGTTCAGAGTTTAGCTCAAAAAATATTTTGTGAAAGGTTGATGAATTAAAAT
TAATAAAAAAATGATGAGAATGGCACAGTTAAGCTTTAAAAATCGAAACTAACCTTTCTA
AATTTTTTTAAGGGTGCTTATAATTACTATTGTTGA


>TTHERM_00024230(protein)
MSKVANSNDNKIRILFCGNINVGKSCIIQRLITNNFIENYTPTVGVDFRSIYYQINQTKV
QVNLLDIPGQDRYNALTLSQIRNVDGVVFVYDISDMDSFTDIINWQQKIQSAAHENTFQT
LLGNKCDLLDRQVPFNKGLEFAESKSMNFFETSAKNGKDVVNSVQSLAQKIFCERLMNQN
QQKNDENGTVKLQKSKLTFLNFFKGAYNYYC