Identifiers and Description

Gene Model Identifier

TTHERM_00055970

Standard Name

VPS25 (Vacuolar Sorting Protein 25)

Aliases

PreTt12980 | 4.m00379 | 3707.m00026

Description

SNF7 family protein; SNF7 family protein; localizes to vesicles during vegetative growth

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• vesicle (IDA) | GO:0031982

Domains

• ( PF03357 ) Snf7
• ( PF04778 ) LMP repeated region
• ( TIGR00162 ) conserved hypothetical protein TIGR00162
• ( TIGR00190 ) thiamine biosynthesis protein ThiC

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_01896.1	2.0006174947921314e-117
	Description: SNF7 family protein (230 aa)
Tetrahymena borealis	EI9_13528.1	2.0006174947921314e-117
	Description: hypothetical protein (2184 aa)
WormBase	WBGene00020866	1.9999391735788327e-19
	Description: locus:vps-24 status:Confirmed UniProt:Q9GYK4 protein_id:CCD72089.1
WormBase	WBGene00004434	1.9999391735788327e-19
	Description: locus:rpl-22 60S ribosomal protein L22 status:Confirmed UniProt:P52819 protein_id:CCD63067.1
SGD	YKL041W	4.999617891954556e-16
	Description: VPS24 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III); forms an ESCRT-III subcomplex with Did4p; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway
DictyBase	DDB_G0284769	0.00000000000007997998332353294
	Description: vps24 on chromosome: 4 position 2459478 to 2460314
Oxytricha	Contig6271.0.g56	0.000000000004997916451710233
	Description: Snf7

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00055970(coding)
ATGTTCAAAAAGCTTTTTGGTGGTTCAGAAAAGCCTGCTCCTCCTCCTCCCCCTCAACCT
AAGAAGTTCAATGAAATGAGTAAGGAAGAAATGAGGGAAGTATAAAAGGAATTCAGAAAA
AAAATTAACACAGAAGTAAGAGAAGTTGATAAGCAGATTTTTAGAATCGATATGGCTAGT
AAGAAGGCTGAAGAAGACTTAAAAAGAGAAATAAAGAAAGGAGATAAAGCTGACAAATTC
GTTAAATAAACATATGCTAAGTAAGTTTTACAATGCAGAACCCAAAAGCAAAGATATATG
GCAAACAAGGCTAAGGTTTAGGGTCTCTAATATACTCTAGATAACTTCTTTGCTGATATT
AAACTAGCTTAAACCATGTAAAATACTGCTGGCATCATGAAAGCTATTAACTAATGCATC
AACATCAAGGAATTGCAAGTTTCTATGGCAGAAATGCAGAAAGAAATGGCTAAGATGGGT
ATCATTCAAGAAATGATGGATGATGCTATGGAAGCTGTTAACGATGATGTAGAGTTTGAT
AATGAGTAAGAAATTGATAGTTTAATTGATCAAATGGAAAAAGGTTTAAAAGAACCAAAA
TAAAATCAATTCAACCAAAACTTAAATCAAAATATTTAATAAAATCATGCACAAGAAGAA
GATGACTTCGATGCTCAACTAGCTGCACTTAAAAATTGA

>TTHERM_00055970(gene)
ATGTTCAAAAAGCTTTTTGGTGGTTCAGAAAAGCCTGCTCCTCCTCCTCCCCCTCAACCT
AAGAAGTTCAATGAAATGAGTAAGGAAGAAATGAGGGAAGTATAAAAGGAATTCAGAAAA
AAAATTAACACAGAAGTAAGAGAAGTTGATAAGCAGATTTTTAGAATCGATATGGCTAGT
AAGAAGGCTGAAGAAGACTTAAAAAGAGAAATAAAGAAAGGAGATAAAGCTGACAAATTC
GTTAAATAAACATATGCTAAGTAAGTTTTACAATGCAGAACCCAAAAGCAAAGATATATG
GCAAACAAGGCTAAGGTTTAGGGTCTCTAATATACTCTAGATAACTTCTTTGCTGATATT
AAACTAGCTTAAACCATGTAAAATACTGCTGGCATCATGAAAGCTATTAACTAATGCATC
AACATCAAGGAATTGCAAGTTTCTATGGCAGAAATGCAGAAAGAAATGGCTAAGATGGGT
ATCATTCAAGAAATGATGGATGATGCTATGGAAGCTGTTAACGATGATGTAGAGTTTGAT
AATGAGTAAGAAATTGATAGTTTAATTGATCAAATGGAAAAAGGTTTAAAAGAACCAAAA
TAAAATCAATTCAACCAAAACTTAAATCAAAATATTTAATAAAATCATGCACAAGAAGAA
GATGACTTCGATGCTCAACTAGCTGCACTTAAAAATTGA

>TTHERM_00055970(protein)
MFKKLFGGSEKPAPPPPPQPKKFNEMSKEEMREVQKEFRKKINTEVREVDKQIFRIDMAS
KKAEEDLKREIKKGDKADKFVKQTYAKQVLQCRTQKQRYMANKAKVQGLQYTLDNFFADI
KLAQTMQNTAGIMKAINQCINIKELQVSMAEMQKEMAKMGIIQEMMDDAMEAVNDDVEFD
NEQEIDSLIDQMEKGLKEPKQNQFNQNLNQNIQQNHAQEEDDFDAQLAALKN